##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062930_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 798628 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.111253299408485 32.0 32.0 32.0 32.0 32.0 2 31.304606149546473 32.0 32.0 32.0 32.0 32.0 3 31.378829692923365 32.0 32.0 32.0 32.0 32.0 4 31.480693138732928 32.0 32.0 32.0 32.0 32.0 5 31.418492715006234 32.0 32.0 32.0 32.0 32.0 6 34.91054408310252 36.0 36.0 36.0 36.0 36.0 7 34.937621771337845 36.0 36.0 36.0 36.0 36.0 8 34.87452981863897 36.0 36.0 36.0 32.0 36.0 9 34.986409191763876 36.0 36.0 36.0 36.0 36.0 10 34.83680136433984 36.0 36.0 36.0 32.0 36.0 11 35.00518389037199 36.0 36.0 36.0 36.0 36.0 12 34.90696669788687 36.0 36.0 36.0 32.0 36.0 13 34.94247759908242 36.0 36.0 36.0 36.0 36.0 14 34.887721191844015 36.0 36.0 36.0 32.0 36.0 15 34.87227219681754 36.0 36.0 36.0 32.0 36.0 16 34.87960226788943 36.0 36.0 36.0 32.0 36.0 17 34.84650550694441 36.0 36.0 36.0 32.0 36.0 18 34.82955268285109 36.0 36.0 36.0 32.0 36.0 19 34.82610426882103 36.0 36.0 36.0 32.0 36.0 20 34.815648837756754 36.0 36.0 36.0 32.0 36.0 21 34.79724352264133 36.0 36.0 36.0 32.0 36.0 22 34.77609099605824 36.0 36.0 36.0 32.0 36.0 23 34.711292366408394 36.0 36.0 36.0 32.0 36.0 24 34.70476116539866 36.0 36.0 36.0 32.0 36.0 25 34.686943107429244 36.0 36.0 36.0 32.0 36.0 26 34.619781675573606 36.0 36.0 36.0 32.0 36.0 27 34.599188858893 36.0 36.0 36.0 32.0 36.0 28 34.56444552407379 36.0 36.0 36.0 32.0 36.0 29 34.519690018381525 36.0 36.0 36.0 32.0 36.0 30 34.48684243477564 36.0 36.0 36.0 32.0 36.0 31 34.47655353931994 36.0 36.0 36.0 32.0 36.0 32 34.438648532232776 36.0 36.0 36.0 32.0 36.0 33 34.37345798043645 36.0 36.0 36.0 32.0 36.0 34 34.35508396900685 36.0 36.0 36.0 32.0 36.0 35 34.29321536434986 36.0 36.0 36.0 32.0 36.0 36 34.25708840661735 36.0 36.0 36.0 32.0 36.0 37 34.25118578361891 36.0 36.0 36.0 32.0 36.0 38 33.83380497553304 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 7.0 21 32.0 22 86.0 23 200.0 24 590.0 25 1479.0 26 3084.0 27 5916.0 28 10287.0 29 15851.0 30 23586.0 31 33285.0 32 47087.0 33 73507.0 34 174972.0 35 408654.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.82066598292653 19.116672865409637 12.551640538025843 25.511020613637985 2 15.170141793175295 21.749174834841753 37.44559419404278 25.635089177940166 3 17.67356015566697 26.087364830684624 29.344450733007104 26.8946242806413 4 11.628250591016547 16.84672636935529 36.86929017910806 34.6557328605201 5 13.344527545399792 37.96941500850835 33.26721986609519 15.41883757999667 6 32.266461982299646 37.113274265365106 17.17044731714891 13.449816435186346 7 28.684462275113194 31.900619064791442 21.231267780582602 18.18365087951276 8 27.82964528634538 32.76505855129374 20.073226682160136 19.332069480200747 9 27.680030453255128 14.182050861443951 19.235387884563128 38.902530800737786 10 15.745015470417131 26.886720985298407 31.515825404040214 25.852438140244242 11 36.56725762785724 21.78951296416416 22.7549694084294 18.888259999549202 12 24.500891533437514 24.87503506030372 28.90196137356253 21.722112032696238 13 29.16358846318552 19.988830816928076 25.950194458983304 24.8973862609031 14 23.737614681196604 20.528982866845222 25.81618202239594 29.917220429562235 15 24.757584257000754 27.495154189434878 23.731449435782366 24.015812117781994 16 24.951667109092092 26.316758240382253 24.76321892044857 23.968355730077082 17 22.96488477739323 26.38687849662171 26.10439403577135 24.543842690213715 18 24.154424838598196 24.668180930295456 28.013292797147106 23.16410143395924 19 24.943903795008442 25.434870803427877 26.872085626850044 22.749139774713633 20 25.127092964434006 24.29641835748308 26.758014995717655 23.81847368236526 21 26.634210964567938 24.242606373187982 25.410861390862067 23.71232127138201 22 24.897261045846243 24.91291292795376 26.220408551687523 23.969417474512476 23 23.332949340492295 24.44147823887527 26.936137816700185 25.289434603932254 24 23.747226493436244 25.833178901816616 26.58960116599969 23.82999343874745 25 24.118989066248616 24.676319888608962 26.819620649413743 24.385070395728675 26 23.512448849777368 25.72511857836189 27.454960256840483 23.30747231502026 27 24.564628337598982 25.341210175450897 26.228356631623235 23.865804855326886 28 23.3022132958023 24.950915820632385 27.60446666032245 24.14240422324286 29 23.32788231817567 25.260071021802393 27.415141968475936 23.996904691546 30 23.54024652278658 25.355484656185357 27.56364665401163 23.540622167016434 31 23.986386653110085 25.22163009561398 26.2803207500864 24.51166250118954 32 23.42868018651988 25.709216305964727 26.324271124979337 24.53783238253605 33 23.293573478515654 24.944529868724864 27.01232613932895 24.749570513430534 34 23.868183935449295 25.27747587111897 27.31659796551085 23.537742227920884 35 25.09591449335611 25.0443260191228 26.82137365581973 23.03838583170137 36 23.503057744031015 25.839063994751 26.50683422068848 24.151044040529506 37 24.60945521569492 25.871369398518457 26.036903289140877 23.482272096645747 38 23.70239961534031 25.467551851425196 26.729591248992023 24.100457284242477 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 706.0 1 488.0 2 270.0 3 270.0 4 816.5 5 1363.0 6 1363.0 7 1531.0 8 1699.0 9 1661.5 10 1624.0 11 1624.0 12 2020.5 13 2417.0 14 3025.5 15 3634.0 16 3634.0 17 5268.5 18 6903.0 19 6903.0 20 7834.5 21 8766.0 22 8681.5 23 8597.0 24 8597.0 25 9439.5 26 10282.0 27 10282.0 28 13395.0 29 16508.0 30 19944.5 31 23381.0 32 23381.0 33 28449.0 34 33517.0 35 33517.0 36 36248.0 37 38979.0 38 43279.5 39 47580.0 40 47580.0 41 49439.5 42 51299.0 43 57409.0 44 63519.0 45 63519.0 46 66279.0 47 69039.0 48 69039.0 49 70094.0 50 71149.0 51 69045.5 52 66942.0 53 66942.0 54 62874.0 55 58806.0 56 58806.0 57 57032.5 58 55259.0 59 48990.5 60 42722.0 61 42722.0 62 41582.5 63 40443.0 64 33358.5 65 26274.0 66 26274.0 67 22104.5 68 17935.0 69 17935.0 70 14662.5 71 11390.0 72 9027.5 73 6665.0 74 6665.0 75 4954.5 76 3244.0 77 3244.0 78 3312.0 79 3380.0 80 2560.5 81 1741.0 82 1741.0 83 1750.5 84 1760.0 85 1760.0 86 1100.5 87 441.0 88 375.5 89 310.0 90 310.0 91 181.5 92 53.0 93 34.5 94 16.0 95 16.0 96 11.0 97 6.0 98 6.0 99 7.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009891964719493931 2 0.0 3 0.0 4 5.008589731389332E-4 5 1.252147432847333E-4 6 0.0 7 5.008589731389332E-4 8 0.0015025769194168 9 0.0033807980686877993 10 8.765032029931333E-4 11 0.0052590192179588 12 5.008589731389332E-4 13 2.504294865694666E-4 14 1.252147432847333E-4 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.252147432847333E-4 22 2.504294865694666E-4 23 2.504294865694666E-4 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 798628.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.65137138656788 #Duplication Level Percentage of deduplicated Percentage of total 1 80.76043508143587 41.7138722573205 2 12.063068432602392 12.461480553478589 3 3.1859988453982067 4.9368362880251775 4 1.2648844258407748 2.6133206096075017 5 0.6399628029689279 1.6527478204868538 6 0.40100095219108506 1.2427349464793453 7 0.25624160848001715 0.926466133900502 8 0.1802802080195274 0.7449375982451459 9 0.13742206402743537 0.6388234259210798 >10 0.845551122227183 8.654554972352207 >50 0.12393371010331361 4.589850235453537 >100 0.12782912417310066 13.337653175985956 >500 0.010469813979708224 3.65705788278568 >1k 0.0026783245064369876 2.193178321740757 >5k 2.4348404603972615E-4 0.6364857782172127 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5061 0.6337118157640353 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3695 0.46266847643708964 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2169 0.2715907781845866 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1701 0.21299027832733136 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1658 0.20760604436608782 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1557 0.19495935529432978 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1202 0.15050812142824943 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1162 0.1454995316968601 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1106 0.13848750607291505 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1106 0.13848750607291505 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1077 0.13485627851765777 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1006 0.1259660317444417 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 965 0.12083222726976764 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 965 0.12083222726976764 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 935 0.11707578497122564 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 924 0.1156984227950936 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 916 0.11469670484881571 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 870 0.10893682665771799 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 846 0.1059316728188844 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 829 0.10380302218304391 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 820 0.10267608949348131 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 810 0.10142394206063399 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 803 0.10054743885764086 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.252147432847333E-4 0.0 10 0.0 0.0 0.0 2.504294865694666E-4 0.0 11 0.0 0.0 0.0 2.504294865694666E-4 0.0 12 0.0 0.0 0.0 2.504294865694666E-4 1.252147432847333E-4 13 0.0 0.0 0.0 2.504294865694666E-4 2.504294865694666E-4 14 0.0 0.0 0.0 2.504294865694666E-4 2.504294865694666E-4 15 0.0 0.0 0.0 2.504294865694666E-4 5.008589731389332E-4 16 0.0 0.0 0.0 2.504294865694666E-4 6.260737164236666E-4 17 0.0 0.0 0.0 3.756442298542E-4 6.260737164236666E-4 18 0.0 0.0 0.0 3.756442298542E-4 6.260737164236666E-4 19 0.0 0.0 0.0 5.008589731389332E-4 6.260737164236666E-4 20 0.0 0.0 0.0 8.765032029931332E-4 8.765032029931332E-4 21 0.0 0.0 0.0 0.0015025769194168 8.765032029931332E-4 22 0.0 0.0 1.252147432847333E-4 0.0030051538388336 8.765032029931332E-4 23 0.0 0.0 1.252147432847333E-4 0.004758160244819866 8.765032029931332E-4 24 0.0 0.0 1.252147432847333E-4 0.008138958313507666 8.765032029931332E-4 25 0.0 0.0 1.252147432847333E-4 0.010643253179202332 8.765032029931332E-4 26 0.0 0.0 1.252147432847333E-4 0.01289711855832753 8.765032029931332E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTATAC 40 0.004482862 19.999569 3 TCTTATA 75 1.5077003E-6 19.199587 2 ATCGTTT 200 0.0 18.399603 29 CATTCCG 45 0.0088458825 17.77851 9 CATCGTT 210 0.0 17.523432 28 ACGATTA 55 0.0013643479 17.45417 32 CGATGCG 120 1.6570993E-9 17.33296 22 GTATATA 65 2.0957222E-4 17.234715 1 TCAACGA 85 4.9811097E-6 16.940811 29 TAATACT 180 0.0 16.888525 4 TACTTGT 140 7.403287E-10 16.000658 7 AGGCCCG 300 0.0 16.000658 10 TATACTG 90 8.5708925E-6 16.000658 5 TACAGCG 60 0.0024403608 16.000658 5 GCAACGC 60 0.0024413809 15.999656 20 TAGGACG 120 3.10647E-8 15.999656 4 GGCATCG 235 0.0 15.659238 26 GCATCGT 235 0.0 15.659238 27 ATACTTG 155 1.8735591E-10 15.484508 6 CGGCATC 240 0.0 15.333003 25 >>END_MODULE