##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062929_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2425790 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2618672679828 32.0 32.0 32.0 32.0 32.0 2 30.825120888452833 32.0 32.0 32.0 32.0 32.0 3 30.862554054555424 32.0 32.0 32.0 32.0 32.0 4 30.94180699895704 32.0 32.0 32.0 32.0 32.0 5 30.82652826501882 32.0 32.0 32.0 32.0 32.0 6 34.50708387782949 36.0 36.0 36.0 32.0 36.0 7 34.4345837850762 36.0 36.0 36.0 32.0 36.0 8 34.40594734086628 36.0 36.0 36.0 32.0 36.0 9 34.57849484085597 36.0 36.0 36.0 32.0 36.0 10 34.25518449659698 36.0 36.0 36.0 32.0 36.0 11 34.55703915013253 36.0 36.0 36.0 32.0 36.0 12 34.35577193409157 36.0 36.0 36.0 32.0 36.0 13 34.45415926358011 36.0 36.0 36.0 32.0 36.0 14 34.34063665857308 36.0 36.0 36.0 32.0 36.0 15 34.27608449206238 36.0 36.0 36.0 32.0 36.0 16 34.301336884066636 36.0 36.0 36.0 32.0 36.0 17 34.20918504899435 36.0 36.0 36.0 32.0 36.0 18 34.248655901788695 36.0 36.0 36.0 32.0 36.0 19 34.236462348348375 36.0 36.0 36.0 32.0 36.0 20 34.22545851042341 36.0 36.0 36.0 32.0 36.0 21 34.20675862296407 36.0 36.0 36.0 32.0 36.0 22 34.18358019449334 36.0 36.0 36.0 32.0 36.0 23 34.129887583014195 36.0 36.0 36.0 32.0 36.0 24 34.10559776402739 36.0 36.0 36.0 32.0 36.0 25 34.08397305620025 36.0 36.0 36.0 32.0 36.0 26 34.03863937109148 36.0 36.0 36.0 32.0 36.0 27 34.04142114527638 36.0 36.0 36.0 32.0 36.0 28 34.02268168308056 36.0 36.0 36.0 32.0 36.0 29 33.99726151068312 36.0 36.0 36.0 32.0 36.0 30 33.97170447565535 36.0 36.0 36.0 32.0 36.0 31 33.98614513210129 36.0 36.0 36.0 32.0 36.0 32 33.93285156588163 36.0 36.0 36.0 32.0 36.0 33 33.90589869691935 36.0 36.0 36.0 32.0 36.0 34 33.91435779684144 36.0 36.0 36.0 32.0 36.0 35 33.876474880348255 36.0 36.0 36.0 32.0 36.0 36 33.8356663190136 36.0 36.0 36.0 32.0 36.0 37 33.828854105260554 36.0 36.0 36.0 32.0 36.0 38 33.24505789866394 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 4.0 8 2.0 9 12.0 10 18.0 11 21.0 12 12.0 13 9.0 14 205.0 15 480.0 16 664.0 17 798.0 18 1008.0 19 1357.0 20 1928.0 21 3000.0 22 4561.0 23 7086.0 24 10872.0 25 17042.0 26 24686.0 27 35129.0 28 49113.0 29 65717.0 30 88086.0 31 118285.0 32 160232.0 33 240784.0 34 531452.0 35 1063225.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.343635863089155 16.974512579025202 11.3523881223525 25.32946343553314 2 17.10841634185073 19.017426632844565 37.0542597290107 26.819897296294005 3 19.26086321953858 23.020864340967016 28.00957172153283 29.708700717961573 4 12.85604980636629 14.943022961486804 35.47297826536847 36.72794896677844 5 15.137234209202813 36.110653068291434 32.87478666655674 15.877326055949014 6 34.76612097367284 35.04178442928142 16.522163556194617 13.669931040851122 7 31.288430810936486 30.20000098936923 19.940613112110377 18.57095508758391 8 28.898050650037533 32.097182641646015 18.94411000489327 20.06065670342318 9 27.72512121864207 14.169039097495158 18.418514112150223 39.68732557171254 10 16.504903997731034 25.882109477544507 30.43079822704157 27.182188297682885 11 38.039160881826845 21.140420416557937 21.603867195825433 19.216551505789788 12 25.565941869165425 23.36570152963947 27.692513815400282 23.37584278579482 13 29.32747650727788 19.038464075678068 25.071781027050026 26.56227838999403 14 24.173321514708004 19.56504710271897 24.240028034878687 32.02160334769434 15 25.560787182290007 26.744603656512616 21.97800022843411 25.716608932763265 16 26.65671138435457 25.566096739122816 22.912142709604115 24.865049166918503 17 24.481670660687456 25.58726949167358 24.547600866204977 25.383458981433986 18 25.572288250152432 24.440058920119373 25.44386943413681 24.54378339559138 19 25.989514385871754 24.543155966192405 25.068673475403497 24.39865617253234 20 26.305359296915388 23.769300980271712 24.542329615023412 25.383010107789488 21 27.653267734178304 23.57710807163962 24.009694756973516 24.759929437208555 22 26.504298525848668 23.730798042050644 24.59384259310793 25.17106083899276 23 24.678484761781473 23.633400479727037 25.2626831237173 26.425431634774192 24 25.160806471097303 24.757208100333507 24.7474366411578 25.334548787411393 25 25.293469839946532 24.140082139807543 24.797217092435528 25.769230927810398 26 25.0116995787327 25.10228627292035 25.342874966859785 24.543139181487163 27 25.787851502978253 24.253994089670776 24.513725354388882 25.444429052962093 28 24.908880356950718 24.290078935315258 25.398479669631772 25.402561038102256 29 24.800341370801664 24.659422844220714 25.40227539306085 25.13796039191677 30 24.895288648794832 24.758133268692625 25.4932151991412 24.853362883371343 31 25.586655007979275 24.581361188856306 24.072633457547003 25.759350345617417 32 25.190445368832016 24.281980351496312 24.194374245041494 26.333200034630178 33 24.754347616365887 24.009041953642466 25.032548889297495 26.204061540694152 34 25.74339556675512 24.354687626263043 25.06901692522589 24.83289988175595 35 26.287885128624623 24.042020441240197 25.077152508605828 24.592941921529356 36 24.895873618485556 24.76674123800516 24.6333209368447 25.704064206664583 37 26.194499815506138 24.46285489300387 24.248924472955675 25.093720818534315 38 24.906416759562806 24.28922085974552 25.08381265542239 25.720549725269287 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 136.0 1 189.5 2 243.0 3 243.0 4 641.0 5 1039.0 6 1039.0 7 1293.0 8 1547.0 9 1563.0 10 1579.0 11 1579.0 12 2016.5 13 2454.0 14 3403.5 15 4353.0 16 4353.0 17 6518.0 18 8683.0 19 8683.0 20 10767.0 21 12851.0 22 13411.0 23 13971.0 24 13971.0 25 16427.5 26 18884.0 27 18884.0 28 24422.0 29 29960.0 30 37730.5 31 45501.0 32 45501.0 33 59010.5 34 72520.0 35 72520.0 36 83332.0 37 94144.0 38 109618.0 39 125092.0 40 125092.0 41 135529.5 42 145967.0 43 167776.0 44 189585.0 45 189585.0 46 196258.5 47 202932.0 48 202932.0 49 214159.0 50 225386.0 51 230546.0 52 235706.0 53 235706.0 54 225484.0 55 215262.0 56 215262.0 57 208714.0 58 202166.0 59 182133.0 60 162100.0 61 162100.0 62 153139.5 63 144179.0 64 120910.0 65 97641.0 66 97641.0 67 83063.5 68 68486.0 69 68486.0 70 54467.0 71 40448.0 72 31422.5 73 22397.0 74 22397.0 75 17024.5 76 11652.0 77 11652.0 78 11108.5 79 10565.0 80 8330.0 81 6095.0 82 6095.0 83 5979.0 84 5863.0 85 5863.0 86 4007.0 87 2151.0 88 1831.0 89 1511.0 90 1511.0 91 1092.5 92 674.0 93 597.5 94 521.0 95 521.0 96 469.5 97 418.0 98 418.0 99 773.0 100 1128.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12313514360270263 2 0.05523973633331822 3 0.012861789355220362 4 0.003132999971143421 5 4.1223683830834485E-4 6 2.473421029850069E-4 7 8.244736766166899E-5 8 2.8856578681584144E-4 9 3.2978947064667597E-4 10 5.771315736316829E-4 11 0.002184855243034228 12 0.0022673026106958967 13 0.014758078811438747 14 0.009893684119400278 15 0.024033407673376507 16 0.011418960421141154 17 0.020529394547755576 18 0.005482749949500987 19 0.007461486773381042 20 0.005606421000993491 21 0.00614232889079434 22 0.007873723611689388 23 0.010058578854723617 24 0.014799302495269583 25 0.017025381422134646 26 0.020158381393278066 27 0.008492078869151905 28 0.005482749949500987 29 0.011336513053479486 30 0.003050552603481752 31 0.005400302581839318 32 0.006595789412933518 33 0.008574526236813573 34 0.01228465778158868 35 0.016448249848502964 36 0.01533521038507043 37 0.009687565700246106 38 0.005853763103978498 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2425790.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.8359916216255 #Duplication Level Percentage of deduplicated Percentage of total 1 77.00773004554694 36.837411292591824 2 13.04471082616579 12.480133555739883 3 4.333866186954589 6.219443598252174 4 1.8316629632880161 3.5047765666194914 5 0.9506114340433349 2.2736720297159185 6 0.5732032634465197 1.6451847904629668 7 0.38789720372465103 1.2988813171197056 8 0.27871568590956536 1.066611297278846 9 0.2091379867350946 0.9003890683101248 >10 1.1774363630862716 10.263336844746943 >50 0.09414312911534692 3.1518925936112425 >100 0.08786684956976228 8.92553939479291 >500 0.01531653025315334 5.017170506471862 >1k 0.0076149980919631875 6.158497733332676 >5k 8.653406922685441E-5 0.25705941095335216 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 6210 0.2559990765894822 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3760 0.1550010512039377 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3693 0.15223906438727178 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3561 0.14679753812160162 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3158 0.1301843935377753 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3002 0.12375349886016515 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2900 0.11954868310942002 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2875 0.11851809101364917 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2855 0.11769361733703247 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2726 0.11237576212285481 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2679 0.1104382489828056 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2559 0.10549140692310546 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2527 0.10417224904051875 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2488 0.10256452537111621 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.244736766166898E-5 2 0.0 0.0 0.0 0.0 8.244736766166898E-5 3 0.0 0.0 0.0 0.0 8.244736766166898E-5 4 0.0 0.0 0.0 0.0 8.244736766166898E-5 5 0.0 0.0 0.0 0.0 8.244736766166898E-5 6 0.0 0.0 0.0 0.0 2.0611841915417245E-4 7 0.0 0.0 0.0 4.122368383083449E-5 2.473421029850069E-4 8 0.0 0.0 0.0 4.122368383083449E-5 2.473421029850069E-4 9 0.0 0.0 0.0 4.122368383083449E-5 2.473421029850069E-4 10 0.0 0.0 0.0 4.122368383083449E-5 2.473421029850069E-4 11 0.0 0.0 0.0 4.122368383083449E-5 2.8856578681584144E-4 12 0.0 0.0 0.0 4.122368383083449E-5 4.122368383083449E-4 13 0.0 0.0 0.0 4.122368383083449E-5 4.946842059700138E-4 14 0.0 0.0 0.0 4.122368383083449E-5 5.359078898008484E-4 15 0.0 0.0 0.0 1.2367105149250346E-4 7.832499927858553E-4 16 0.0 0.0 0.0 1.2367105149250346E-4 8.656973604475243E-4 17 0.0 0.0 0.0 1.2367105149250346E-4 9.069210442783589E-4 18 0.0 0.0 0.0 1.6489473532333796E-4 9.069210442783589E-4 19 0.0 0.0 0.0 1.6489473532333796E-4 9.069210442783589E-4 20 0.0 0.0 0.0 2.8856578681584144E-4 9.893684119400277E-4 21 0.0 0.0 0.0 4.122368383083449E-4 0.0010305920957708623 22 0.0 0.0 0.0 7.008026251241864E-4 0.0010718157796016968 23 0.0 0.0 0.0 0.0011954868310942001 0.0013191578825867036 24 0.0 0.0 0.0 0.001937513140049221 0.0013603815664175382 25 0.0 0.0 0.0 0.0021436315592033937 0.0013603815664175382 26 0.0 0.0 0.0 0.002597092081342573 0.001525276301740876 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATAGG 255 0.0 17.589716 1 TAGGACG 250 0.0 17.277563 4 AAGACGG 790 0.0 17.009907 5 CGCTTCG 590 0.0 16.541744 32 TAAACGC 605 0.0 16.395733 28 CAAGACG 825 0.0 16.094698 4 ATCGTTT 645 0.0 15.875366 29 TCTAGCG 710 0.0 15.773723 28 CGTTTAT 655 0.0 15.632994 31 AAACGCT 625 0.0 15.615406 29 GTATCAA 5325 0.0 15.583002 1 AACGCTT 630 0.0 15.491475 30 GTAAACG 645 0.0 15.378309 27 CATCGTT 690 0.0 15.30345 28 TCGTTTA 665 0.0 15.157317 30 CTAGCGG 740 0.0 15.13456 29 TATAGGG 180 7.2759576E-12 15.116771 2 ACGCTTC 650 0.0 15.014813 31 CGGCATC 705 0.0 14.977846 25 AATCGGG 75 6.2506757E-4 14.932457 25 >>END_MODULE