##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062916_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1563047 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24691515994081 32.0 32.0 32.0 32.0 32.0 2 30.839550570136407 32.0 32.0 32.0 32.0 32.0 3 30.88404507350067 32.0 32.0 32.0 32.0 32.0 4 30.957328218537256 32.0 32.0 32.0 32.0 32.0 5 30.85482906144217 32.0 32.0 32.0 32.0 32.0 6 34.5310032263905 36.0 36.0 36.0 32.0 36.0 7 34.444593796603684 36.0 36.0 36.0 32.0 36.0 8 34.42103468417776 36.0 36.0 36.0 32.0 36.0 9 34.5813158529462 36.0 36.0 36.0 32.0 36.0 10 34.281750964622304 36.0 36.0 36.0 32.0 36.0 11 34.56864828760747 36.0 36.0 36.0 32.0 36.0 12 34.37751903813513 36.0 36.0 36.0 32.0 36.0 13 34.47419047539837 36.0 36.0 36.0 32.0 36.0 14 34.36702159308069 36.0 36.0 36.0 32.0 36.0 15 34.313973924008685 36.0 36.0 36.0 32.0 36.0 16 34.321951291291946 36.0 36.0 36.0 32.0 36.0 17 34.246363673005355 36.0 36.0 36.0 32.0 36.0 18 34.270304091943494 36.0 36.0 36.0 32.0 36.0 19 34.27060158779614 36.0 36.0 36.0 32.0 36.0 20 34.250352676535 36.0 36.0 36.0 32.0 36.0 21 34.23580800833244 36.0 36.0 36.0 32.0 36.0 22 34.19575546992509 36.0 36.0 36.0 32.0 36.0 23 34.15433061193937 36.0 36.0 36.0 32.0 36.0 24 34.13736950968205 36.0 36.0 36.0 32.0 36.0 25 34.10335901607565 36.0 36.0 36.0 32.0 36.0 26 34.0698974503006 36.0 36.0 36.0 32.0 36.0 27 34.06984946709856 36.0 36.0 36.0 32.0 36.0 28 34.0486760794781 36.0 36.0 36.0 32.0 36.0 29 34.01961489321818 36.0 36.0 36.0 32.0 36.0 30 33.99048205204322 36.0 36.0 36.0 32.0 36.0 31 34.014650231247046 36.0 36.0 36.0 32.0 36.0 32 33.962017776816694 36.0 36.0 36.0 32.0 36.0 33 33.91470058162039 36.0 36.0 36.0 32.0 36.0 34 33.929654706480356 36.0 36.0 36.0 32.0 36.0 35 33.88499706022915 36.0 36.0 36.0 32.0 36.0 36 33.840250485110175 36.0 36.0 36.0 32.0 36.0 37 33.85026489926407 36.0 36.0 36.0 32.0 36.0 38 33.24171186151152 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 4.0 8 3.0 9 7.0 10 6.0 11 13.0 12 4.0 13 9.0 14 165.0 15 342.0 16 456.0 17 587.0 18 696.0 19 871.0 20 1282.0 21 1929.0 22 2907.0 23 4609.0 24 6890.0 25 10498.0 26 15375.0 27 21960.0 28 30925.0 29 41697.0 30 56414.0 31 75694.0 32 103097.0 33 153903.0 34 338199.0 35 694504.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.00749959004632 17.013718074857543 11.284359242405609 25.694423092690528 2 16.77612922471063 19.269635086398605 37.64865463474713 26.30558105414364 3 19.107880857119277 23.357069685570647 28.414646709276504 29.120402748033573 4 12.514771263741995 14.902101790082028 36.022241828380146 36.56088511779583 5 14.629321469265962 36.57394345246664 33.65143160215452 15.14530347611288 6 34.806550303830605 35.348186421094255 16.55489743717699 13.290365837898149 7 30.72929395552018 30.35681611417706 20.433243807283983 18.480646123018772 8 28.546321851876023 32.82573340959488 19.17997085171096 19.44797388681814 9 27.511754330180715 14.04173019133855 18.415255901796563 40.03125957668417 10 15.703117002763845 26.528367796089668 31.626765789743068 26.14174941140342 11 37.93164779510461 21.140585353245186 21.88798366241806 19.03978318923214 12 24.774986308521473 23.675829294133905 28.656072618578442 22.89311177876618 13 29.49076517994542 19.267357078642338 25.252953766712416 25.988923974699823 14 23.61213749860038 19.55621670905514 25.16531503431067 31.666330758033816 15 25.307419798244556 27.03662416713808 22.362422601114492 25.29353343350287 16 25.965949044496327 25.783402958487883 23.57314288310204 24.677505113913746 17 24.145254707026286 25.892660027375396 25.09174725814079 24.870338007457523 18 25.117131942102944 24.818279940703054 26.02558828290299 24.038999834291012 19 25.471928688606404 25.06494138000752 25.594197631655053 23.86893229973102 20 25.72248251575997 24.237241831144242 25.152737176891055 24.887538476204735 21 26.967957076481508 24.100012412298156 24.654215126880562 24.277815384339775 22 25.706803535873142 24.30388137319636 25.143254559321083 24.846060531609414 23 24.392341283170975 24.198346049874434 25.582481565014316 25.82683110194027 24 24.697761380258225 25.047509722696788 25.30633373388669 24.948395163158306 25 24.93458776373657 24.491787396954532 25.30130581316256 25.272319026146338 26 24.622269887301666 25.390719984437748 25.68500776832724 24.302002359933347 27 25.274580435464163 24.864773214411397 25.065997837395148 24.794648512729296 28 24.555814748038035 24.818007209332976 25.656664794168044 24.96951324846095 29 24.451677631621045 25.06459320040592 25.73298405869247 24.75074510928056 30 24.52153217189909 25.21212276313011 25.831952450720085 24.434392614250708 31 25.032918013991274 25.061453357509468 24.77552409700993 25.130104531489327 32 24.673921249726483 25.076105302354623 24.7430846224422 25.506888825476693 33 24.39780003787743 24.704850358555948 25.354397109030696 25.542952494535925 34 25.1294723466007 24.869056013185897 25.45515272426197 24.546318915951428 35 25.756178714827314 24.60288260041911 25.405467662726156 24.23547102202742 36 24.569527609740867 25.39080046428951 24.97827642118276 25.061395504786866 37 25.571943725702468 25.097254107066536 24.993985601273515 24.336816565957477 38 24.57716529437997 24.976087085874713 25.41141408977692 25.0353335299684 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 99.0 1 139.0 2 179.0 3 179.0 4 490.0 5 801.0 6 801.0 7 1002.5 8 1204.0 9 1242.5 10 1281.0 11 1281.0 12 1671.0 13 2061.0 14 2745.5 15 3430.0 16 3430.0 17 5043.0 18 6656.0 19 6656.0 20 8173.0 21 9690.0 22 10487.5 23 11285.0 24 11285.0 25 13415.0 26 15545.0 27 15545.0 28 19910.5 29 24276.0 30 29677.0 31 35078.0 32 35078.0 33 43439.5 34 51801.0 35 51801.0 36 58636.5 37 65472.0 38 75368.0 39 85264.0 40 85264.0 41 92118.0 42 98972.0 43 111258.5 44 123545.0 45 123545.0 46 128783.5 47 134022.0 48 134022.0 49 140731.0 50 147440.0 51 148568.0 52 149696.0 53 149696.0 54 142023.0 55 134350.0 56 134350.0 57 128620.5 58 122891.0 59 110495.5 60 98100.0 61 98100.0 62 91415.0 63 84730.0 64 70627.5 65 56525.0 66 56525.0 67 46966.0 68 37407.0 69 37407.0 70 30346.5 71 23286.0 72 18418.5 73 13551.0 74 13551.0 75 10441.0 76 7331.0 77 7331.0 78 6773.5 79 6216.0 80 4955.5 81 3695.0 82 3695.0 83 3489.0 84 3283.0 85 3283.0 86 2266.0 87 1249.0 88 1037.5 89 826.0 90 826.0 91 624.0 92 422.0 93 377.5 94 333.0 95 333.0 96 295.5 97 258.0 98 258.0 99 527.5 100 797.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12123755715599083 2 0.05559653676440951 3 0.011771878900634466 4 0.0029429697251586165 5 5.118208217667158E-4 6 3.198880136041974E-4 7 6.397760272083948E-5 8 3.198880136041974E-4 9 3.838656163250369E-4 10 4.4784321904587645E-4 11 0.0015994400680209874 12 0.001983305684346024 13 0.013563251776817971 14 0.0078052675319424175 15 0.023223869787664733 16 0.009852550819009282 17 0.02111260889787703 18 0.004222521779575407 19 0.00633378266936311 20 0.004350476985017085 21 0.005182185820387999 22 0.006077872258479751 23 0.0078052675319424175 24 0.013371318968655453 25 0.017018042323743304 26 0.01861748239176429 27 0.007485379518338221 28 0.004670364998621283 29 0.012091766914238664 30 0.002367171300671061 31 0.004670364998621283 32 0.005182185820387999 33 0.007101513902013183 34 0.010556304448938516 35 0.014203027804026366 36 0.014650871023072243 37 0.008381065956429973 38 0.005374118628550517 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1563047.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.114122549978106 #Duplication Level Percentage of deduplicated Percentage of total 1 77.90526972025785 43.71585852371647 2 13.368870498557566 15.003648750216925 3 4.21534944380683 7.096219058422756 4 1.711817545281776 3.842285580765771 5 0.831230990373743 2.3321898830585943 6 0.47802822759482955 1.6094480727363056 7 0.3010789063634065 1.1826345054222704 8 0.2091270912442887 0.9387986581281975 9 0.1484614826864523 0.7497707250077132 >10 0.6885405689726026 6.89591482212279 >50 0.06374525347812926 2.502526614771487 >100 0.06656518570991961 8.073533065686837 >500 0.008248905465734169 3.1155044650642214 >1k 0.003666180206992964 2.9416672748796677 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3916 0.25053629225480745 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2667 0.1706282664564789 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1837 0.11752685619818215 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1829 0.11701503537641543 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1699 0.10869794702270628 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1575 0.10076472428532218 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1572 0.10057279147715967 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 3.8386561632503696E-4 13 0.0 0.0 0.0 6.397760272083949E-5 3.8386561632503696E-4 14 0.0 0.0 0.0 6.397760272083949E-5 3.8386561632503696E-4 15 0.0 0.0 0.0 6.397760272083949E-5 4.478432190458764E-4 16 0.0 0.0 0.0 6.397760272083949E-5 4.478432190458764E-4 17 0.0 0.0 0.0 1.2795520544167899E-4 4.478432190458764E-4 18 0.0 0.0 0.0 1.9193280816251848E-4 4.478432190458764E-4 19 0.0 0.0 0.0 2.5591041088335797E-4 4.478432190458764E-4 20 0.0 0.0 0.0 3.1988801360419746E-4 5.118208217667159E-4 21 0.0 0.0 0.0 3.1988801360419746E-4 5.118208217667159E-4 22 0.0 0.0 0.0 5.118208217667159E-4 5.757984244875554E-4 23 0.0 0.0 0.0 7.677312326500739E-4 5.757984244875554E-4 24 0.0 0.0 0.0 0.0012795520544167899 5.757984244875554E-4 25 0.0 0.0 0.0 0.0017273952734626662 5.757984244875554E-4 26 0.0 0.0 0.0 0.002111260889787703 7.037536299292344E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 395 0.0 19.037327 29 TAGGACG 120 8.367351E-11 18.663048 4 TCTAGCG 400 0.0 17.999388 28 TCGCGCA 45 0.008853395 17.777174 9 ACCGTCG 370 0.0 17.72856 8 TACCGTC 400 0.0 16.798891 7 TAGCGGC 455 0.0 16.175276 30 TCGCGTA 190 0.0 15.999455 9 ATCGTTT 295 0.0 15.728279 29 ATACCGT 410 0.0 15.606729 6 TATACTG 175 5.456968E-12 15.539844 5 CGCGTAA 200 0.0 15.199483 10 CATCGTT 320 0.0 14.999491 28 CCGTGCG 75 6.247743E-4 14.932826 13 CGTACAC 65 0.004166068 14.767311 3 CCGTCGT 435 0.0 14.712143 9 CGTTTAT 320 0.0 14.499507 31 GCGTAAC 210 0.0 14.475698 11 TCGTTTA 310 0.0 14.451122 30 CTATACT 155 3.1432137E-9 14.448811 4 >>END_MODULE