##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062916_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1563047 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21034236334544 32.0 32.0 32.0 32.0 32.0 2 31.301942296041002 32.0 32.0 32.0 32.0 32.0 3 31.383499024661447 32.0 32.0 32.0 32.0 32.0 4 31.48324842439159 32.0 32.0 32.0 32.0 32.0 5 31.40336151120216 32.0 32.0 32.0 32.0 32.0 6 34.93753482780748 36.0 36.0 36.0 36.0 36.0 7 34.95878626810326 36.0 36.0 36.0 36.0 36.0 8 34.89718351399542 36.0 36.0 36.0 36.0 36.0 9 35.00652827458163 36.0 36.0 36.0 36.0 36.0 10 34.86245519168649 36.0 36.0 36.0 32.0 36.0 11 35.03902313877958 36.0 36.0 36.0 36.0 36.0 12 34.941001134322896 36.0 36.0 36.0 32.0 36.0 13 34.99313328389997 36.0 36.0 36.0 36.0 36.0 14 34.936832353729606 36.0 36.0 36.0 32.0 36.0 15 34.90650249160774 36.0 36.0 36.0 32.0 36.0 16 34.923673440401984 36.0 36.0 36.0 32.0 36.0 17 34.882445633432646 36.0 36.0 36.0 32.0 36.0 18 34.87890831177821 36.0 36.0 36.0 32.0 36.0 19 34.87751551936698 36.0 36.0 36.0 32.0 36.0 20 34.86819654175466 36.0 36.0 36.0 32.0 36.0 21 34.86301755481441 36.0 36.0 36.0 32.0 36.0 22 34.835011359223365 36.0 36.0 36.0 32.0 36.0 23 34.78628409766309 36.0 36.0 36.0 32.0 36.0 24 34.76754697715424 36.0 36.0 36.0 32.0 36.0 25 34.74539409243612 36.0 36.0 36.0 32.0 36.0 26 34.68054639431828 36.0 36.0 36.0 32.0 36.0 27 34.66332234411377 36.0 36.0 36.0 32.0 36.0 28 34.63140263856429 36.0 36.0 36.0 32.0 36.0 29 34.6061513185464 36.0 36.0 36.0 32.0 36.0 30 34.58528694274708 36.0 36.0 36.0 32.0 36.0 31 34.57071860283152 36.0 36.0 36.0 32.0 36.0 32 34.54795473200742 36.0 36.0 36.0 32.0 36.0 33 34.50633858098957 36.0 36.0 36.0 32.0 36.0 34 34.49902722055063 36.0 36.0 36.0 32.0 36.0 35 34.46736534474012 36.0 36.0 36.0 32.0 36.0 36 34.43906741128066 36.0 36.0 36.0 32.0 36.0 37 34.435731619074794 36.0 36.0 36.0 32.0 36.0 38 34.010130213614815 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 5.0 21 30.0 22 98.0 23 366.0 24 1011.0 25 2337.0 26 5056.0 27 9991.0 28 17389.0 29 27697.0 30 42331.0 31 61125.0 32 89421.0 33 143212.0 34 354493.0 35 808484.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.36171241957197 18.142182933134045 12.028757019057029 26.467347628236954 2 15.821169576051874 20.204024836137155 36.901688690984585 27.073116896826388 3 18.109244315749944 23.950079556148985 28.79836626793692 29.142309860164158 4 11.994999497774533 15.69950410833227 36.01801102081005 36.28748537308314 5 14.087749176927614 37.030452078825576 33.34527582681508 15.536522917431734 6 34.81989938856449 35.832475498114896 16.115679479067435 13.231945634253183 7 30.352915735785995 30.616057467646296 20.42013107823492 18.610895718332785 8 28.351871223244817 33.138837439180044 18.958167388028908 19.551123949546227 9 27.316862191102103 13.894967037241774 18.244298057039902 40.54387271461622 10 15.470405032257734 26.758820654162797 31.738296494770434 26.032477818809035 11 38.07417634797163 21.013539537984542 21.749762312713294 19.162521801330538 12 24.57064548406827 23.737463564685317 28.629456368470752 23.062434582775662 13 29.45126164397584 19.264830074726174 25.286365032244856 25.99754324905313 14 23.483810787519506 19.504851741502335 25.05465286712428 31.956684603853887 15 25.235581527618812 27.21671197347233 22.24059801144815 25.30710848746071 16 25.885913859276144 25.894998678862503 23.45930736567742 24.759780096183928 17 24.074899859057343 25.95251454370854 25.053565247878023 24.919020349356096 18 25.056636172808624 24.753638246322726 26.101646335650813 24.088079245217834 19 25.408640942978682 24.955935426126022 25.67817858324158 23.957245047653718 20 25.647149445921976 24.221536524493505 25.171859835308858 24.95945419427567 21 26.862165284962824 24.15040888112058 24.584881059162687 24.40254477475391 22 25.548400717829622 24.355472811083494 25.240028278136585 24.8560981929503 23 24.23386673695686 24.0949071171381 25.683218130775586 25.988008015129456 24 24.64084573272589 25.062074269039897 25.3245743730035 24.97250562523072 25 24.82502092071624 24.471671942696428 25.473371191086112 25.229935945501214 26 24.630225450674228 25.195211660301965 25.71502968240878 24.459533206615028 27 25.375917842206313 24.686684482364825 25.072278974127997 24.86511870130086 28 24.500798760369968 24.70655073072019 25.79084314163298 25.00180736727686 29 24.48243718838909 24.802133269185124 25.885529993659816 24.82989954876597 30 24.559594177270423 25.042625077812758 25.941446418437835 24.456334326478988 31 24.977431900640223 24.84243915889925 24.907504380866346 25.272624559594174 32 24.68454243538422 24.880953675737196 24.906800627236418 25.527703261642166 33 24.39414809663433 24.4741840776381 25.459823025155355 25.671844800572213 34 25.052925471850813 24.718002721607217 25.68841499967691 24.54065680686505 35 25.805685945464212 24.455502617643614 25.450610250363553 24.28820118652862 36 24.489858590304706 25.319136276772227 25.1354565793607 25.055548553562367 37 25.551502929854315 24.9224111623003 25.06495326116233 24.461132646683048 38 24.60303395364043 24.689212005044006 25.531415322547108 25.176338718768456 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 39.0 1 56.0 2 73.0 3 73.0 4 384.0 5 695.0 6 695.0 7 927.0 8 1159.0 9 1221.0 10 1283.0 11 1283.0 12 1651.0 13 2019.0 14 2713.5 15 3408.0 16 3408.0 17 5176.0 18 6944.0 19 6944.0 20 8505.0 21 10066.0 22 10980.5 23 11895.0 24 11895.0 25 13658.0 26 15421.0 27 15421.0 28 19837.0 29 24253.0 30 29414.0 31 34575.0 32 34575.0 33 43516.5 34 52458.0 35 52458.0 36 59274.5 37 66091.0 38 75634.5 39 85178.0 40 85178.0 41 91873.0 42 98568.0 43 111482.5 44 124397.0 45 124397.0 46 128840.0 47 133283.0 48 133283.0 49 140900.5 50 148518.0 51 148305.5 52 148093.0 53 148093.0 54 141312.0 55 134531.0 56 134531.0 57 129154.5 58 123778.0 59 111303.0 60 98828.0 61 98828.0 62 92288.5 63 85749.0 64 71013.5 65 56278.0 66 56278.0 67 46931.0 68 37584.0 69 37584.0 70 30469.5 71 23355.0 72 18342.5 73 13330.0 74 13330.0 75 10165.5 76 7001.0 77 7001.0 78 6620.5 79 6240.0 80 4868.0 81 3496.0 82 3496.0 83 3171.0 84 2846.0 85 2846.0 86 1847.0 87 848.0 88 700.5 89 553.0 90 553.0 91 342.5 92 132.0 93 87.5 94 43.0 95 43.0 96 33.0 97 23.0 98 23.0 99 19.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010172438832613479 2 1.2795520544167896E-4 3 0.0 4 2.559104108833579E-4 5 6.397760272083948E-5 6 2.559104108833579E-4 7 7.037536299292344E-4 8 0.0020472832870668633 9 0.0045424097931796035 10 7.037536299292344E-4 11 0.004414454587737924 12 1.9193280816251845E-4 13 4.4784321904587645E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 6.397760272083948E-5 22 1.2795520544167896E-4 23 1.9193280816251845E-4 24 0.0 25 1.9193280816251845E-4 26 0.0 27 3.838656163250369E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 2.559104108833579E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1563047.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.948400617549744 #Duplication Level Percentage of deduplicated Percentage of total 1 75.92616715090999 40.96095282812337 2 14.575525031641604 15.726525272362512 3 4.582120354467055 7.41594193681853 4 1.8837377094457028 4.064985464302492 5 0.9132452947816746 2.4634061512487047 6 0.5026211146965234 1.6269363152692475 7 0.3289413408909675 1.2422101466641937 8 0.22288664179363943 0.9619502275026854 9 0.15890575890786032 0.7715440387797321 >10 0.7537791348164886 7.205926375280535 >50 0.06798029367851452 2.5863437114568013 >100 0.07119011720587906 8.376306202103981 >500 0.00895837275293182 3.3745232731696 >1k 0.003941684011290001 3.2224480569176857 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4608 0.2948087933376284 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3214 0.20562401514477813 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2076 0.13281750324846278 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1958 0.12526814612740372 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1880 0.12027789311517825 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1731 0.11074523030977315 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1711 0.10946567825535637 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1642 0.10505122366761845 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1639 0.10485929085945593 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.5591041088335797E-4 2 0.0 0.0 0.0 0.0 2.5591041088335797E-4 3 0.0 0.0 0.0 0.0 2.5591041088335797E-4 4 0.0 0.0 0.0 0.0 2.5591041088335797E-4 5 0.0 0.0 0.0 0.0 2.5591041088335797E-4 6 0.0 0.0 0.0 0.0 3.1988801360419746E-4 7 0.0 0.0 0.0 0.0 3.8386561632503696E-4 8 0.0 0.0 0.0 0.0 3.8386561632503696E-4 9 0.0 0.0 0.0 0.0 3.8386561632503696E-4 10 0.0 0.0 0.0 0.0 3.8386561632503696E-4 11 0.0 0.0 0.0 0.0 3.8386561632503696E-4 12 0.0 0.0 0.0 0.0 3.8386561632503696E-4 13 0.0 0.0 0.0 0.0 3.8386561632503696E-4 14 0.0 0.0 0.0 0.0 3.8386561632503696E-4 15 0.0 0.0 0.0 0.0 4.478432190458764E-4 16 0.0 0.0 0.0 6.397760272083949E-5 4.478432190458764E-4 17 0.0 0.0 0.0 1.2795520544167899E-4 4.478432190458764E-4 18 0.0 0.0 0.0 1.9193280816251848E-4 5.757984244875554E-4 19 0.0 0.0 0.0 1.9193280816251848E-4 5.757984244875554E-4 20 0.0 0.0 0.0 4.478432190458764E-4 6.397760272083949E-4 21 0.0 0.0 0.0 4.478432190458764E-4 7.037536299292344E-4 22 0.0 0.0 0.0 6.397760272083949E-4 7.677312326500739E-4 23 0.0 0.0 0.0 8.956864380917528E-4 7.677312326500739E-4 24 0.0 0.0 0.0 0.0014075072598584688 7.677312326500739E-4 25 0.0 0.0 0.0 0.0017273952734626662 7.677312326500739E-4 26 0.0 0.0 0.0 0.001983305684346024 8.956864380917528E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 330 0.0 18.908655 29 TAGCGGC 335 0.0 18.626438 30 ATACCGT 310 0.0 18.580812 6 AAGACGG 490 0.0 17.632812 5 CAAGACG 520 0.0 17.53862 4 ATCGTTT 350 0.0 17.371029 29 CATCGTT 360 0.0 17.332935 28 ACCGTCG 320 0.0 17.000698 8 CGTCGTA 325 0.0 16.738611 10 TCTAGCG 375 0.0 16.639618 28 TACCGTC 350 0.0 16.457817 7 CGTTTAT 380 0.0 16.420675 31 CGCATCG 390 0.0 16.410404 13 CCTAATA 110 2.021061E-7 15.999633 2 CCGTCGT 335 0.0 15.76184 9 CGCAAGA 510 0.0 15.685914 2 AGCGGCG 425 0.0 15.434939 31 CGTGCAA 125 5.1399184E-8 15.360138 11 GACGGAC 535 0.0 15.252962 7 GTCGTAG 360 0.0 15.111245 11 >>END_MODULE