##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062915_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1534956 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.222515173073365 32.0 32.0 32.0 32.0 32.0 2 30.849683639140146 32.0 32.0 32.0 32.0 32.0 3 30.906882021373903 32.0 32.0 32.0 32.0 32.0 4 30.96832938533743 32.0 32.0 32.0 32.0 32.0 5 30.892208636599356 32.0 32.0 32.0 32.0 32.0 6 34.54666778721996 36.0 36.0 36.0 32.0 36.0 7 34.46228621537034 36.0 36.0 36.0 32.0 36.0 8 34.450143847771535 36.0 36.0 36.0 32.0 36.0 9 34.57361513945676 36.0 36.0 36.0 32.0 36.0 10 34.30434553172859 36.0 36.0 36.0 32.0 36.0 11 34.57027693301958 36.0 36.0 36.0 32.0 36.0 12 34.391598847133075 36.0 36.0 36.0 32.0 36.0 13 34.483739599050395 36.0 36.0 36.0 32.0 36.0 14 34.372385918554016 36.0 36.0 36.0 32.0 36.0 15 34.323162357748366 36.0 36.0 36.0 32.0 36.0 16 34.33781554650427 36.0 36.0 36.0 32.0 36.0 17 34.266405030502504 36.0 36.0 36.0 32.0 36.0 18 34.28790988145589 36.0 36.0 36.0 32.0 36.0 19 34.27521049463307 36.0 36.0 36.0 32.0 36.0 20 34.24548977299675 36.0 36.0 36.0 32.0 36.0 21 34.22618954549837 36.0 36.0 36.0 32.0 36.0 22 34.205665178676135 36.0 36.0 36.0 32.0 36.0 23 34.154937340223434 36.0 36.0 36.0 32.0 36.0 24 34.13742999799343 36.0 36.0 36.0 32.0 36.0 25 34.1159095114127 36.0 36.0 36.0 32.0 36.0 26 34.06605922254449 36.0 36.0 36.0 32.0 36.0 27 34.06825211927899 36.0 36.0 36.0 32.0 36.0 28 34.05315201217494 36.0 36.0 36.0 32.0 36.0 29 34.0217888981834 36.0 36.0 36.0 32.0 36.0 30 33.98504387096438 36.0 36.0 36.0 32.0 36.0 31 34.00841652790047 36.0 36.0 36.0 32.0 36.0 32 33.9520624695431 36.0 36.0 36.0 32.0 36.0 33 33.909910121202174 36.0 36.0 36.0 32.0 36.0 34 33.909204563518436 36.0 36.0 36.0 32.0 36.0 35 33.86141752597469 36.0 36.0 36.0 32.0 36.0 36 33.82648362558927 36.0 36.0 36.0 32.0 36.0 37 33.818929011645935 36.0 36.0 36.0 32.0 36.0 38 33.20644305113632 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 2.0 9 2.0 10 8.0 11 23.0 12 9.0 13 5.0 14 307.0 15 489.0 16 665.0 17 774.0 18 898.0 19 1143.0 20 1510.0 21 2164.0 22 3336.0 23 4984.0 24 6947.0 25 10414.0 26 15121.0 27 21494.0 28 29764.0 29 40189.0 30 53660.0 31 72097.0 32 98120.0 33 146504.0 34 327527.0 35 696798.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.617310162147426 17.274222153516607 11.465184190838107 25.643283493497858 2 16.794543960087424 19.99318190558569 37.13384519014727 26.07842894417962 3 18.46598405650266 24.65501907420861 28.517424151108127 28.361572718180604 4 12.597903997727572 15.473620157897274 35.79895265036269 36.129523194012464 5 14.737715096162555 36.455383324440554 33.15593376474719 15.6509678146497 6 33.89810743020945 35.492947653018014 17.032932668816574 13.57601224795596 7 30.15130736731696 30.671974096960497 21.1187298650449 18.05798867067764 8 28.67366536543162 31.884124063814372 19.589863396379823 19.85234717437418 9 28.10546765570825 13.95422924726083 18.524203331174746 39.416099765856174 10 16.418678617521188 25.925875254812365 30.887460397810223 26.767985729856225 11 37.578277491263414 21.05941401658975 22.15523374447204 19.207074747674806 12 25.31762179601192 23.78673066987725 28.16493074896917 22.730716785141666 13 29.5993656361947 19.129756588300754 25.145005818476562 26.12587195702798 14 24.324162320925495 19.768170671003286 24.710522818073073 31.19714418999815 15 25.48627736674534 26.436546423930906 22.639640614146323 25.43753559517743 16 26.093231205466743 25.317303532428813 23.536559621789827 25.05290564031462 17 24.32782894385314 25.413024694817203 25.019124832046835 25.240021529282824 18 25.52396365335038 24.009715373183823 26.1641410735774 24.302179899888397 19 25.88611264944457 24.79910088933772 25.379483337133923 23.935303124083788 20 26.150986494700884 23.49344801772648 24.912191775377735 25.4433737121949 21 27.82700361462424 23.73996335860356 23.987410057880897 24.445622968891296 22 26.408532374288207 23.76184147088334 24.622636592262488 25.20698956256597 23 24.393693882111794 23.569301295846373 25.554345864387322 26.482658957654508 24 24.97364405332958 24.93513635374437 25.005505754001607 25.085713838924445 25 25.21243357887295 23.95845482711774 25.04986267808681 25.779248915922498 26 24.868035152398953 25.020704520590165 25.60030077755167 24.51095954945921 27 25.80759284850072 24.446472887384278 24.462370320274633 25.283563943840363 28 24.69803808638987 24.15610611650821 25.701244202311713 25.444611594790207 29 24.616724806782393 24.648781142534716 25.637966690079082 25.096527360603805 30 24.54196130858146 24.808556049394298 25.96731803866536 24.682164603358885 31 25.275688945469422 24.706459519363705 24.35731215819848 25.660539376968394 32 24.816434443478748 24.775584184760444 24.347796626954395 26.060184744806413 33 24.43321638341331 24.184852542113372 25.14481918369607 26.237111890777243 34 25.460421295421526 24.432072140162497 25.244105056717856 24.86340150769812 35 26.315861490184634 24.124605143816265 25.1718862397181 24.387647126281 36 24.792294214731715 25.170794067801577 24.7031587699048 25.333752947561905 37 25.925783553280972 24.928998882616046 24.616587450768325 24.528630113334657 38 24.79016315901603 24.627805506999557 25.136834533967733 25.445196800016678 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 940.0 1 725.5 2 511.0 3 511.0 4 1026.5 5 1542.0 6 1542.0 7 1803.5 8 2065.0 9 1932.5 10 1800.0 11 1800.0 12 2251.5 13 2703.0 14 3383.0 15 4063.0 16 4063.0 17 6055.5 18 8048.0 19 8048.0 20 9342.5 21 10637.0 22 10832.5 23 11028.0 24 11028.0 25 12442.5 26 13857.0 27 13857.0 28 17681.5 29 21506.0 30 26457.5 31 31409.0 32 31409.0 33 40184.5 34 48960.0 35 48960.0 36 53960.0 37 58960.0 38 68517.0 39 78074.0 40 78074.0 41 83726.5 42 89379.0 43 103484.5 44 117590.0 45 117590.0 46 121743.0 47 125896.0 48 125896.0 49 134779.0 50 143662.0 51 143906.5 52 144151.0 53 144151.0 54 137755.5 55 131360.0 56 131360.0 57 129508.0 58 127656.0 59 114555.5 60 101455.0 61 101455.0 62 97368.0 63 93281.0 64 76609.5 65 59938.0 66 59938.0 67 50217.5 68 40497.0 69 40497.0 70 32605.0 71 24713.0 72 19163.0 73 13613.0 74 13613.0 75 10194.0 76 6775.0 77 6775.0 78 6736.0 79 6697.0 80 5271.5 81 3846.0 82 3846.0 83 3952.0 84 4058.0 85 4058.0 86 2714.5 87 1371.0 88 1198.5 89 1026.0 90 1026.0 91 754.0 92 482.0 93 415.5 94 349.0 95 349.0 96 315.5 97 282.0 98 282.0 99 529.0 100 776.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12019888517977063 2 0.05231420314328228 3 0.010488900007557221 4 0.002215047206564879 5 1.9544534175572461E-4 6 3.9089068351144923E-4 7 6.514844725190819E-5 8 2.6059378900763276E-4 9 1.3029689450381638E-4 10 1.9544534175572461E-4 11 0.002084750312061062 12 0.0021498987593129705 13 0.012378204977862557 14 0.007817813670228983 15 0.02202017517114497 16 0.009641970193282414 17 0.019674831070076275 18 0.004495242860381665 19 0.00690573540870227 20 0.005016430438396931 21 0.0052118757801526555 22 0.006254250936183188 23 0.008404149695496157 24 0.012899392555877824 25 0.015700775787709873 26 0.017394635416259487 27 0.007622368328473259 28 0.005016430438396931 29 0.010293454665801496 30 0.002736234784580144 31 0.004820985096641207 32 0.005342172674656472 33 0.00723147764496181 34 0.010814642243816761 35 0.014332658395419803 36 0.013876619264656446 37 0.007882962117480892 38 0.004755836649389299 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1534956.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.624555919054224 #Duplication Level Percentage of deduplicated Percentage of total 1 78.45023365650881 39.71508240606801 2 12.967787668112454 13.129769839015616 3 3.914357895333529 5.94487890478511 4 1.6355797878829639 3.312020017270238 5 0.8290754534526155 2.098578832721359 6 0.507805227486281 1.5424448480920372 7 0.3163037488251018 1.1208915773861996 8 0.21727124308329038 0.8799408156057966 9 0.17176826118252822 0.782612274901825 >10 0.7930277245420984 7.195275396077106 >50 0.08178112689060468 2.9671941655763567 >100 0.09314507767541653 10.501760518460289 >500 0.015524115283502787 5.474196496086626 >1k 0.006209646113401114 4.998267681009202 >5k 1.293676273625232E-4 0.3370862269441996 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5147 0.3353190580055715 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3591 0.23394807408160231 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2428 0.1581804299276331 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2285 0.14886420197061023 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2252 0.14671430321129725 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2132 0.13889648954106829 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2077 0.13531332494221332 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2046 0.13329372307740417 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2036 0.13264223860488508 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1972 0.12847273798076297 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1945 0.12671372990496144 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1944 0.12664858145770955 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1894 0.12339115909511411 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1852 0.12065492431053398 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1786 0.11635512679190804 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1775 0.11563849387213705 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1760 0.11466126716335842 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1739 0.11329314977106836 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1717 0.11185988393152638 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1656 0.10788582864915998 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1630 0.10619196902061036 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1620 0.10554048454809127 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1615 0.10521474231183173 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1612 0.10501929697007602 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.954453417557246E-4 2 0.0 0.0 0.0 0.0 1.954453417557246E-4 3 0.0 0.0 0.0 0.0 1.954453417557246E-4 4 0.0 0.0 0.0 0.0 1.954453417557246E-4 5 0.0 0.0 0.0 0.0 1.954453417557246E-4 6 0.0 0.0 0.0 0.0 1.954453417557246E-4 7 0.0 0.0 0.0 6.51484472519082E-5 1.954453417557246E-4 8 0.0 0.0 0.0 6.51484472519082E-5 1.954453417557246E-4 9 0.0 0.0 0.0 6.51484472519082E-5 1.954453417557246E-4 10 0.0 0.0 0.0 1.302968945038164E-4 1.954453417557246E-4 11 0.0 0.0 0.0 1.302968945038164E-4 1.954453417557246E-4 12 0.0 0.0 0.0 1.302968945038164E-4 1.954453417557246E-4 13 0.0 0.0 0.0 1.302968945038164E-4 1.954453417557246E-4 14 0.0 0.0 0.0 1.302968945038164E-4 1.954453417557246E-4 15 0.0 0.0 0.0 1.302968945038164E-4 1.954453417557246E-4 16 0.0 0.0 0.0 1.302968945038164E-4 1.954453417557246E-4 17 0.0 0.0 0.0 1.302968945038164E-4 1.954453417557246E-4 18 0.0 0.0 0.0 1.954453417557246E-4 1.954453417557246E-4 19 0.0 0.0 0.0 2.605937890076328E-4 1.954453417557246E-4 20 0.0 0.0 0.0 5.211875780152656E-4 1.954453417557246E-4 21 0.0 0.0 0.0 7.817813670228983E-4 2.605937890076328E-4 22 0.0 0.0 0.0 0.0011726720505343476 2.605937890076328E-4 23 0.0 0.0 0.0 0.0018241565230534295 3.2574223625954097E-4 24 0.0 0.0 0.0 0.0033877192570992264 3.2574223625954097E-4 25 0.0 0.0 0.0 0.004169500624122125 3.2574223625954097E-4 26 0.0 0.0 0.0 0.00508157888564884 3.2574223625954097E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACTC 100 3.270543E-9 19.19744 5 TCTAGCG 490 0.0 17.630875 28 GGACCGT 110 1.0657459E-8 17.452219 6 CTAGCGG 490 0.0 17.304943 29 TACCGTC 395 0.0 17.011497 7 ATACCGT 425 0.0 16.938917 6 ACCGTCG 380 0.0 16.840956 8 TAGCGGC 525 0.0 16.45602 30 CGTCGTA 395 0.0 16.202482 10 TTATACT 200 0.0 15.197972 4 GTACACG 75 6.1846944E-4 14.952775 1 AGCGGCG 605 0.0 14.8089075 31 CCGTCGT 435 0.0 14.712599 9 CGAGCCG 560 0.0 14.285671 15 TAGGACG 90 1.536455E-4 14.220325 4 AGGCCCG 575 0.0 14.191261 10 GTATTAG 500 0.0 14.0983305 1 GTCGTAG 455 0.0 14.065891 11 ACAATAC 345 0.0 13.912548 3 TTTCGTT 515 0.0 13.668525 28 >>END_MODULE