##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062900_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2143301 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.239559912490126 32.0 32.0 32.0 32.0 32.0 2 31.332432075569415 32.0 32.0 32.0 32.0 32.0 3 31.40389147394603 32.0 32.0 32.0 32.0 32.0 4 31.491295902908643 32.0 32.0 32.0 32.0 32.0 5 31.41526318515225 32.0 32.0 32.0 32.0 32.0 6 34.96268792857373 36.0 36.0 36.0 36.0 36.0 7 34.98473289565955 36.0 36.0 36.0 36.0 36.0 8 34.92482250509845 36.0 36.0 36.0 36.0 36.0 9 35.03166564099023 36.0 36.0 36.0 36.0 36.0 10 34.873964972721986 36.0 36.0 36.0 32.0 36.0 11 35.047992792426264 36.0 36.0 36.0 36.0 36.0 12 34.94569964741303 36.0 36.0 36.0 36.0 36.0 13 34.99932347346453 36.0 36.0 36.0 36.0 36.0 14 34.9420389390011 36.0 36.0 36.0 32.0 36.0 15 34.913945358118156 36.0 36.0 36.0 32.0 36.0 16 34.931211248443404 36.0 36.0 36.0 32.0 36.0 17 34.88996272572074 36.0 36.0 36.0 32.0 36.0 18 34.89639859263818 36.0 36.0 36.0 32.0 36.0 19 34.88768026516107 36.0 36.0 36.0 32.0 36.0 20 34.87387819069743 36.0 36.0 36.0 32.0 36.0 21 34.8623478456829 36.0 36.0 36.0 32.0 36.0 22 34.848884501057015 36.0 36.0 36.0 32.0 36.0 23 34.79312705028365 36.0 36.0 36.0 32.0 36.0 24 34.769917524416776 36.0 36.0 36.0 32.0 36.0 25 34.74781376950788 36.0 36.0 36.0 32.0 36.0 26 34.68567364079987 36.0 36.0 36.0 32.0 36.0 27 34.6776215753177 36.0 36.0 36.0 32.0 36.0 28 34.649662833171824 36.0 36.0 36.0 32.0 36.0 29 34.61598160967591 36.0 36.0 36.0 32.0 36.0 30 34.596076799292305 36.0 36.0 36.0 32.0 36.0 31 34.584292640184465 36.0 36.0 36.0 32.0 36.0 32 34.55353121190164 36.0 36.0 36.0 32.0 36.0 33 34.53190009242752 36.0 36.0 36.0 32.0 36.0 34 34.51680655213617 36.0 36.0 36.0 32.0 36.0 35 34.4884684885604 36.0 36.0 36.0 32.0 36.0 36 34.46643798514534 36.0 36.0 36.0 32.0 36.0 37 34.46069824070441 36.0 36.0 36.0 32.0 36.0 38 34.02819622628833 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 7.0 21 42.0 22 133.0 23 412.0 24 1252.0 25 3208.0 26 6854.0 27 13557.0 28 23819.0 29 37822.0 30 57072.0 31 82773.0 32 120376.0 33 193482.0 34 481211.0 35 1121276.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.45261537025804 17.84037142457188 11.802342401194531 26.90467080397555 2 16.36611003307515 20.00418979881967 36.35187031592856 27.277829852176623 3 18.52408971021802 23.48046308008068 28.1392580883413 29.856189121359993 4 12.33361498663041 15.622286598637519 35.16670811371452 36.87739030101754 5 14.598562963654176 36.45336630429711 32.791723043904256 16.15634768814445 6 35.13121845979277 35.333290408790944 15.999656603660902 13.535834527755384 7 31.05949583188113 30.042229410537896 19.904231479317108 18.994043278263867 8 28.71716797511079 32.57237346133783 18.61171170246419 20.098746861087186 9 27.546962047759916 13.873704052780395 18.002444919326994 40.57688898013269 10 16.254262150979525 26.07843850838246 30.54466883530134 27.12263050533667 11 38.57931329883357 20.67083706023181 21.491851215213863 19.257998425720753 12 25.308543476962587 23.45630281584998 27.751929738122964 23.48322396906447 13 29.925903876131027 18.874472366638877 24.814059833984743 26.385563923245353 14 23.909334246566395 19.431661721802023 24.230241109391542 32.42876292224004 15 25.547881515475428 27.073285553452365 21.582642848577965 25.796190082494245 16 26.42841712705507 25.326657643193972 23.109701446228453 25.135223783522502 17 24.56061934371327 25.59990407320297 24.415236124090832 25.424240458992927 18 25.591505812762648 24.29971338603397 25.75233250019479 24.356448301008584 19 26.173691889286665 24.295840854830935 24.946239468931335 24.58422778695106 20 26.554039773228304 23.570884350821466 24.39396053097535 25.481115344974874 21 27.72246323189776 23.463792715711953 23.88669237782147 24.92705167456882 22 26.607160270218948 23.688482101657304 24.65134355962467 25.053014068499074 23 24.784293013440482 23.610822744915435 25.38794131108976 26.216942930554314 24 25.221749068376305 24.33162677570719 24.951511710207757 25.495112445708745 25 25.2800354593384 23.996687351280734 25.044230858955817 25.67904633042505 26 25.0727966559962 25.14684138797247 25.211554710751976 24.568807245279356 27 25.83778558194634 24.06430460705669 24.616210803998882 25.48169900699809 28 24.852738836029097 24.296540709867628 25.453820998543836 25.396899455559442 29 24.738055924016273 24.36909234867151 25.34688314893708 25.545968578375135 30 24.63298435450737 24.657899193813655 25.570230219647172 25.138886232031805 31 25.617913676147214 24.376044242036 24.246104490223257 25.75993759159353 32 25.413229406415617 24.36876574965439 24.199307516769693 26.0186973271603 33 24.795397380022685 23.990657401830166 25.049164816327714 26.16478040181944 34 25.69634409725932 24.2530097265853 24.996582374570814 25.054063801584565 35 26.11541729323133 24.015665555141343 25.13492038682388 24.73399676480345 36 24.704229597242758 24.831043329891603 24.811447388864185 25.653279684001458 37 26.07813834827679 24.584741013977972 24.338998582093694 24.99812205565154 38 25.004420750981783 24.332186659736546 24.941433797679373 25.7219587916023 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 43.5 2 68.0 3 68.0 4 250.0 5 432.0 6 432.0 7 688.0 8 944.0 9 1150.5 10 1357.0 11 1357.0 12 1823.5 13 2290.0 14 3178.5 15 4067.0 16 4067.0 17 6314.0 18 8561.0 19 8561.0 20 10007.5 21 11454.0 22 11834.5 23 12215.0 24 12215.0 25 14538.0 26 16861.0 27 16861.0 28 22758.5 29 28656.0 30 36561.0 31 44466.0 32 44466.0 33 57001.0 34 69536.0 35 69536.0 36 78249.0 37 86962.0 38 100316.0 39 113670.0 40 113670.0 41 120469.5 42 127269.0 43 144416.5 44 161564.0 45 161564.0 46 164202.5 47 166841.0 48 166841.0 49 178523.0 50 190205.0 51 197197.5 52 204190.0 53 204190.0 54 196348.5 55 188507.0 56 188507.0 57 183486.5 58 178466.0 59 160256.0 60 142046.0 61 142046.0 62 135998.5 63 129951.0 64 110483.0 65 91015.0 66 91015.0 67 77511.5 68 64008.0 69 64008.0 70 51638.0 71 39268.0 72 31009.0 73 22750.0 74 22750.0 75 17523.5 76 12297.0 77 12297.0 78 11228.0 79 10159.0 80 7915.5 81 5672.0 82 5672.0 83 5271.0 84 4870.0 85 4870.0 86 3201.0 87 1532.0 88 1197.0 89 862.0 90 862.0 91 521.5 92 181.0 93 113.5 94 46.0 95 46.0 96 34.5 97 23.0 98 23.0 99 22.0 100 21.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009378057491691554 2 0.0 3 0.0 4 1.8662800978490654E-4 5 4.6657002446226636E-5 6 2.332850122311332E-4 7 3.732560195698131E-4 8 0.0020062511051877454 9 0.0037792171981443578 10 7.931690415858529E-4 11 0.004572386239730211 12 2.332850122311332E-4 13 1.8662800978490654E-4 14 0.0 15 0.0 16 9.331400489245327E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.3997100733867992E-4 22 9.331400489245327E-5 23 0.0 24 0.0 25 4.6657002446226636E-5 26 9.331400489245327E-5 27 9.331400489245327E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2143301.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.19704491599235 #Duplication Level Percentage of deduplicated Percentage of total 1 72.59138905474937 34.26099049731282 2 15.706588233644512 14.826091006806339 3 5.422365338432072 7.677588612866956 4 2.314134264951867 4.368811953782807 5 1.2011235256962236 2.834474049596988 6 0.7049059472446222 1.9961686592192742 7 0.40378460752003525 1.3340208180256614 8 0.2961468947240193 1.1181806633616957 9 0.20690725972776755 0.8788870107734705 >10 0.966155492482094 8.02917411619265 >50 0.0783473787205077 2.6165075867889227 >100 0.0846953312021967 8.593873750412822 >500 0.015604649712148814 5.077863664209528 >1k 0.007752628519411511 6.100791948504124 >5k 9.939267332578861E-5 0.28657566214600083 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 6109 0.2850276279439985 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4257 0.19861885941358678 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3413 0.1592403493489715 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3406 0.15891375033184793 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2842 0.1325992009521761 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2810 0.13110617687389686 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2806 0.13091954886411195 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2748 0.12821344272223079 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2728 0.12728030267330626 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2586 0.12065500832594209 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2555 0.11920864125010905 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2463 0.1149161970250562 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2454 0.11449628400304016 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2394 0.11169686385626656 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 2161 0.10082578228629577 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 4.6657002446226636E-5 0.0 0.0 0.0 0.0 16 4.6657002446226636E-5 0.0 0.0 0.0 0.0 17 4.6657002446226636E-5 0.0 0.0 9.331400489245327E-5 0.0 18 4.6657002446226636E-5 0.0 0.0 1.3997100733867992E-4 0.0 19 4.6657002446226636E-5 0.0 0.0 1.3997100733867992E-4 0.0 20 4.6657002446226636E-5 0.0 0.0 1.8662800978490654E-4 0.0 21 4.6657002446226636E-5 0.0 0.0 2.332850122311332E-4 0.0 22 4.6657002446226636E-5 0.0 0.0 4.1991302201603976E-4 0.0 23 4.6657002446226636E-5 0.0 0.0 5.13227026908493E-4 0.0 24 4.6657002446226636E-5 0.0 0.0 7.465120391396262E-4 0.0 25 4.6657002446226636E-5 0.0 0.0 9.797970513707593E-4 0.0 26 4.6657002446226636E-5 0.0 0.0 0.0012597390660481192 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 680 0.0 18.587898 28 CTAGCGG 685 0.0 18.452217 29 TAGCGGC 740 0.0 17.080769 30 TAGGACG 570 0.0 16.561874 4 CGCGCCA 155 1.0913936E-11 16.51583 10 AGGACGT 625 0.0 16.128458 5 GTTATTC 460 0.0 16.000456 3 AAGACGG 840 0.0 16.000454 5 CGTTATT 450 0.0 15.644524 2 CAAGACG 875 0.0 15.543301 4 GGACGTG 620 0.0 15.484311 6 TAGACTG 260 0.0 15.385054 5 GTAGGAC 640 0.0 14.75042 3 AGCGGCG 870 0.0 14.712376 31 GTATCAA 4190 0.0 14.702775 1 TTAGGAC 470 0.0 14.638714 3 GTATTAG 530 0.0 14.491655 1 GTCTTAC 155 3.1341187E-9 14.452698 1 GCGCAAG 900 0.0 14.401082 1 CGCAAGA 925 0.0 14.356829 2 >>END_MODULE