##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062897_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1531233 Sequences flagged as poor quality 0 Sequence length 38 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.264369302385724 32.0 32.0 32.0 32.0 32.0 2 30.863758813975405 32.0 32.0 32.0 32.0 32.0 3 30.901629601765375 32.0 32.0 32.0 32.0 32.0 4 30.979498221368008 32.0 32.0 32.0 32.0 32.0 5 30.872690831506375 32.0 32.0 32.0 32.0 32.0 6 34.550577214571526 36.0 36.0 36.0 32.0 36.0 7 34.47902964473728 36.0 36.0 36.0 32.0 36.0 8 34.44938164211456 36.0 36.0 36.0 32.0 36.0 9 34.61130866432476 36.0 36.0 36.0 32.0 36.0 10 34.30203176133221 36.0 36.0 36.0 32.0 36.0 11 34.58338868088658 36.0 36.0 36.0 32.0 36.0 12 34.381963424247 36.0 36.0 36.0 32.0 36.0 13 34.487078060621734 36.0 36.0 36.0 32.0 36.0 14 34.37596825564757 36.0 36.0 36.0 32.0 36.0 15 34.303672269341114 36.0 36.0 36.0 32.0 36.0 16 34.324646216480446 36.0 36.0 36.0 32.0 36.0 17 34.23316699679278 36.0 36.0 36.0 32.0 36.0 18 34.2664630399162 36.0 36.0 36.0 32.0 36.0 19 34.252957583855626 36.0 36.0 36.0 32.0 36.0 20 34.2425111005314 36.0 36.0 36.0 32.0 36.0 21 34.22629671643701 36.0 36.0 36.0 32.0 36.0 22 34.20283849681923 36.0 36.0 36.0 32.0 36.0 23 34.1303701004354 36.0 36.0 36.0 32.0 36.0 24 34.10568672435873 36.0 36.0 36.0 32.0 36.0 25 34.07690403746523 36.0 36.0 36.0 32.0 36.0 26 34.019332132993476 36.0 36.0 36.0 32.0 36.0 27 34.024586721942384 36.0 36.0 36.0 32.0 36.0 28 34.00467923562253 36.0 36.0 36.0 32.0 36.0 29 33.96261770742924 36.0 36.0 36.0 32.0 36.0 30 33.93297231708042 36.0 36.0 36.0 32.0 36.0 31 33.962362357655564 36.0 36.0 36.0 32.0 36.0 32 33.91758341153828 36.0 36.0 36.0 32.0 36.0 33 33.87178894394256 36.0 36.0 36.0 32.0 36.0 34 33.88320066247266 36.0 36.0 36.0 32.0 36.0 35 33.831732989035636 36.0 36.0 36.0 32.0 36.0 36 33.78267970975025 36.0 36.0 36.0 32.0 36.0 37 33.78323089954305 36.0 36.0 36.0 32.0 36.0 38 33.1509600433115 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 2.0 7 2.0 8 6.0 9 2.0 10 11.0 11 18.0 12 6.0 13 7.0 14 119.0 15 332.0 16 407.0 17 534.0 18 695.0 19 921.0 20 1361.0 21 1828.0 22 2924.0 23 4633.0 24 6835.0 25 10088.0 26 14976.0 27 21398.0 28 30184.0 29 41435.0 30 55204.0 31 75367.0 32 102633.0 33 152859.0 34 337875.0 35 668570.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.59151614221496 16.51982018798529 10.982394769105026 25.90626890069473 2 17.55311780403719 18.961076130509444 35.973998478801235 27.511807586652132 3 19.669154506687253 22.805700935372982 27.355528602322465 30.169615955617303 4 12.931984837916701 14.383015018404011 34.63957397785249 38.0454261658268 5 15.566223798875676 35.59121021504253 32.52145984409939 16.3211061419824 6 36.116870827289716 33.96807401113746 16.123910923839606 13.791144237733219 7 31.84725230876334 29.258877334641216 20.006387018026672 18.88748333856877 8 29.667534380947032 31.359969070535637 18.776588171830937 20.195908376686393 9 27.766668321112203 13.993343904369565 17.97204596572163 40.2679418087966 10 16.828878838838186 25.25670623193848 29.79973550588581 28.114679423337524 11 39.14732403214988 20.60327729242955 20.829765876895486 19.41963279852508 12 25.703229851389608 22.998984446686716 27.09907685877278 24.198708843150893 13 29.911529279595563 18.123859008566214 25.04508447010643 26.919527241731796 14 24.6030616017044 19.017317029522683 23.45238110788756 32.927240260885355 15 26.10214553305179 25.932371125939426 21.65443493995186 26.311048401056926 16 27.36645888088284 24.747757115313274 22.425777106639565 25.460006897164323 17 25.146350863212074 25.02910033901405 24.031262451744386 25.793286346029486 18 26.683355778512453 23.270534726458358 25.110538697361047 24.935570797668138 19 26.30108392092524 24.390702680673083 24.28770537414735 25.02050802425433 20 26.55138092103201 22.92953279622141 24.038501729416804 26.480584553329777 21 28.10200028345023 23.341865141695724 23.171599070753487 25.38453550410056 22 26.915176749122377 23.128288023512123 24.04676300106131 25.909772226304188 23 25.001012355967873 22.86611690294837 24.876002722257855 27.2568680188259 24 25.526596477752285 24.344175188813143 24.12262224112041 26.006606092314165 25 25.847532355219617 23.474794477241286 24.037312194720485 26.640360972818613 26 25.48354500164279 24.675083756114734 24.654508067955945 25.18686317428653 27 26.64016281126355 23.613446036765772 23.848636729980708 25.897754421989973 28 25.40433819418683 23.411841080917277 24.99457921658577 26.189241508310126 29 25.046993279209968 24.026334524221625 25.064693319051383 25.86197887751703 30 25.1774927850187 24.171085346093786 25.255732636532784 25.395689232354723 31 25.831798529200466 24.33206630353854 23.515028018339276 26.32110714892172 32 25.73168278550193 23.785731826470418 23.427368580549764 27.055216807477883 33 24.890029684637465 23.551641145715973 24.453871249008063 27.1044579206385 34 26.352218100114953 23.8515649493155 24.474670811997072 25.321546138572476 35 27.071109401239333 23.304369295725152 24.690018609007698 24.934502694027806 36 25.227320082221254 24.63156217116887 23.905365870864035 26.235751875745837 37 26.840312588785075 24.149541011766164 23.935052593422313 25.075093806026445 38 25.346215339279276 23.701088347936945 24.474962250053554 26.477734062730224 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 108.5 2 149.0 3 149.0 4 416.0 5 683.0 6 683.0 7 834.0 8 985.0 9 977.5 10 970.0 11 970.0 12 1267.0 13 1564.0 14 2020.5 15 2477.0 16 2477.0 17 3624.5 18 4772.0 19 4772.0 20 5774.5 21 6777.0 22 6851.5 23 6926.0 24 6926.0 25 7980.0 26 9034.0 27 9034.0 28 11735.5 29 14437.0 30 18251.5 31 22066.0 32 22066.0 33 30265.0 34 38464.0 35 38464.0 36 44615.5 37 50767.0 38 60166.0 39 69565.0 40 69565.0 41 75145.5 42 80726.0 43 96475.0 44 112224.0 45 112224.0 46 119385.0 47 126546.0 48 126546.0 49 135730.5 50 144915.0 51 148851.5 52 152788.0 53 152788.0 54 147191.5 55 141595.0 56 141595.0 57 139187.0 58 136779.0 59 124518.0 60 112257.0 61 112257.0 62 107615.5 63 102974.0 64 86249.5 65 69525.0 66 69525.0 67 58557.0 68 47589.0 69 47589.0 70 38093.0 71 28597.0 72 22223.0 73 15849.0 74 15849.0 75 11916.5 76 7984.0 77 7984.0 78 7712.5 79 7441.0 80 5918.0 81 4395.0 82 4395.0 83 4469.5 84 4544.0 85 4544.0 86 3056.0 87 1568.0 88 1342.0 89 1116.0 90 1116.0 91 814.5 92 513.0 93 468.5 94 424.0 95 424.0 96 385.5 97 347.0 98 347.0 99 590.0 100 833.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12134012263319821 2 0.05622919568739702 3 0.012147073632817475 4 0.0029388081369719696 5 6.5306847488266E-5 6 2.61227389953064E-4 7 1.30613694976532E-4 8 4.571479324178619E-4 9 3.2653423744132996E-4 10 5.22454779906128E-4 11 0.00195920542464798 12 0.0031347286794367675 13 0.014236892752441988 14 0.009077651800868973 15 0.02468598835056455 16 0.011036857225516953 17 0.021094111738709915 18 0.0062041505113852695 19 0.00816335593603325 20 0.005289854646549546 21 0.0065306847488266 22 0.007053139528732728 23 0.009861333970728164 24 0.014498120142395049 25 0.016914473499460892 26 0.019592054246479796 27 0.008816424410915909 28 0.005812309426455673 29 0.010645016140587356 30 0.0028735012894837036 31 0.0060735368164087375 32 0.006857218986267929 33 0.009012344953380708 34 0.012604221565235335 35 0.016587939262019562 36 0.015804257092160368 37 0.009665413428263367 38 0.006857218986267929 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1531233.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.15758362149322 #Duplication Level Percentage of deduplicated Percentage of total 1 76.52756664027929 35.323275565480856 2 13.258151604065088 12.239284826621374 3 4.399796237388347 6.092518882343515 4 1.900665434901019 3.509204949917022 5 1.0277247937937675 2.371864655470884 6 0.6125309509960549 1.6963769154811899 7 0.4199231407329782 1.3567846238087755 8 0.30072255802060394 1.1104501294964297 9 0.2158942361943807 0.8968640634486481 >10 1.109475226199092 9.215376955575088 >50 0.09752098765035436 3.1750439984755303 >100 0.10291537927351307 10.468392899251883 >500 0.01831179348272332 5.9016580566241865 >1k 0.008801017022704232 6.642903478004743 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3525 0.23020663739613764 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3045 0.19885935060176993 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3031 0.19794505473693425 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2578 0.16836105282474972 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2567 0.1676426775023788 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2438 0.1592180941763925 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2422 0.15817318461658025 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2400 0.15673643397183837 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2272 0.14837715749334032 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2229 0.1455689630513449 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2194 0.1432832233892556 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2169 0.14165055220204892 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2153 0.14060564264223668 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 2098 0.13701376603038204 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2041 0.1332912757235509 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1988 0.12983001280667278 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1988 0.12983001280667278 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1957 0.12780550053453654 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1890 0.12342994175282272 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1874 0.12238503219301046 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1837 0.11996867883594463 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 1753 0.11448290364693028 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1655 0.10808283259308021 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1609 0.10507871760861998 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1603 0.10468687652369038 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1589 0.10377258065885465 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCC 1588 0.1037072738113664 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 1583 0.10338073957392507 No Hit ACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGG 1537 0.10037662458946484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.30613694976532E-4 2 0.0 6.5306847488266E-5 0.0 6.5306847488266E-5 1.30613694976532E-4 3 0.0 6.5306847488266E-5 0.0 1.30613694976532E-4 1.30613694976532E-4 4 0.0 6.5306847488266E-5 0.0 1.9592054246479797E-4 1.30613694976532E-4 5 0.0 6.5306847488266E-5 0.0 1.9592054246479797E-4 1.9592054246479797E-4 6 0.0 6.5306847488266E-5 0.0 1.9592054246479797E-4 3.2653423744132996E-4 7 0.0 6.5306847488266E-5 0.0 2.61227389953064E-4 3.2653423744132996E-4 8 0.0 6.5306847488266E-5 0.0 2.61227389953064E-4 3.2653423744132996E-4 9 0.0 6.5306847488266E-5 0.0 2.61227389953064E-4 3.2653423744132996E-4 10 0.0 6.5306847488266E-5 0.0 2.61227389953064E-4 3.9184108492959594E-4 11 0.0 6.5306847488266E-5 0.0 2.61227389953064E-4 3.9184108492959594E-4 12 0.0 6.5306847488266E-5 0.0 4.571479324178619E-4 8.489890173474579E-4 13 0.0 6.5306847488266E-5 0.0 4.571479324178619E-4 9.7960271232399E-4 14 0.0 6.5306847488266E-5 0.0 4.571479324178619E-4 9.7960271232399E-4 15 0.0 6.5306847488266E-5 0.0 4.571479324178619E-4 0.0011755232547887879 16 0.0 6.5306847488266E-5 0.0 5.877616273943939E-4 0.0011755232547887879 17 0.0 6.5306847488266E-5 0.0 6.530684748826599E-4 0.0011755232547887879 18 0.0 6.5306847488266E-5 0.0 7.836821698591919E-4 0.0012408301022770539 19 0.0 6.5306847488266E-5 0.0 7.836821698591919E-4 0.0012408301022770539 20 0.0 6.5306847488266E-5 0.0 9.142958648357238E-4 0.0013061369497653198 21 0.0 6.5306847488266E-5 0.0 0.001044909559812256 0.0014367506447418518 22 0.0 6.5306847488266E-5 0.0 0.001110216407300522 0.0016326711872066497 23 0.0 6.5306847488266E-5 0.0 0.0018938985771597139 0.0016326711872066497 24 0.0 6.5306847488266E-5 0.0 0.0025469670520423737 0.0016326711872066497 25 0.0 6.5306847488266E-5 0.0 0.0030694218319485015 0.0016326711872066497 26 0.0 6.5306847488266E-5 0.0 0.004179638239249024 0.0018285917296714477 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATCGT 35 0.0020687168 22.853596 6 AATATCG 40 0.0044881753 19.996899 5 CTAGCGG 610 0.0 19.672293 29 TCTAGCG 620 0.0 19.353733 28 AATACCG 50 7.2049466E-4 19.197023 5 TAGCGGC 650 0.0 18.95462 30 CGGTCCA 765 0.0 17.149347 10 CGCCGGT 775 0.0 17.132265 7 ATCGTTT 460 0.0 16.34796 29 CCGGTCC 870 0.0 16.182983 9 AGCGGCG 755 0.0 16.106617 31 CGCACGA 60 0.0024433353 15.999084 28 GGACCGT 100 1.3171957E-6 15.9975195 6 GCCGGTC 850 0.0 15.996996 8 ATAACGA 315 0.0 15.7456455 12 GTCCTAT 535 0.0 15.568818 1 ACGAACG 330 0.0 15.515277 15 CAAGACG 705 0.0 15.430734 4 TAACGAA 325 0.0 15.261663 13 CCGATAA 325 0.0 15.260666 9 >>END_MODULE