##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062894_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 541975 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.03326906222612 32.0 32.0 32.0 32.0 32.0 2 30.672881590479264 32.0 32.0 32.0 32.0 32.0 3 30.73641219613451 32.0 32.0 32.0 32.0 32.0 4 30.780379168780847 32.0 32.0 32.0 32.0 32.0 5 30.729799344988237 32.0 32.0 32.0 32.0 32.0 6 34.34541076617925 36.0 36.0 36.0 32.0 36.0 7 34.20881036948199 36.0 36.0 36.0 32.0 36.0 8 34.18094192536556 36.0 36.0 36.0 32.0 36.0 9 34.29375709211679 36.0 36.0 36.0 32.0 36.0 10 34.047253102080354 36.0 36.0 36.0 32.0 36.0 11 34.34128142441995 36.0 36.0 36.0 32.0 36.0 12 34.16277503574888 36.0 36.0 36.0 32.0 36.0 13 34.24345587896121 36.0 36.0 36.0 32.0 36.0 14 34.14737580146686 36.0 36.0 36.0 32.0 36.0 15 34.11366206928364 36.0 36.0 36.0 32.0 36.0 16 34.09574795885419 36.0 36.0 36.0 32.0 36.0 17 34.028962590525396 36.0 36.0 36.0 32.0 36.0 18 34.06389962636653 36.0 36.0 36.0 32.0 36.0 19 34.04046312099267 36.0 36.0 36.0 32.0 36.0 20 34.01200424373818 36.0 36.0 36.0 32.0 36.0 21 33.96666451404585 36.0 36.0 36.0 32.0 36.0 22 33.96270676691729 36.0 36.0 36.0 32.0 36.0 23 33.91011947045528 36.0 36.0 36.0 32.0 36.0 24 33.902539785045434 36.0 36.0 36.0 32.0 36.0 25 33.87226532589141 36.0 36.0 36.0 32.0 36.0 26 33.823338714885374 36.0 36.0 36.0 32.0 36.0 27 33.84727339821948 36.0 36.0 36.0 32.0 36.0 28 33.817305226255826 36.0 36.0 36.0 32.0 36.0 29 33.77353198948291 36.0 36.0 36.0 32.0 36.0 30 33.7315669541953 36.0 36.0 36.0 27.0 36.0 31 33.74588495779326 36.0 36.0 36.0 27.0 36.0 32 33.70607869366668 36.0 36.0 36.0 27.0 36.0 33 33.62349554868767 36.0 36.0 36.0 27.0 36.0 34 33.61972969232898 36.0 36.0 36.0 27.0 36.0 35 33.57231975644633 36.0 36.0 36.0 27.0 36.0 36 33.52294847548318 36.0 36.0 36.0 21.0 36.0 37 33.50302135707366 36.0 36.0 36.0 21.0 36.0 38 32.896683426357306 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 2.0 11 5.0 12 3.0 13 2.0 14 139.0 15 254.0 16 351.0 17 403.0 18 469.0 19 620.0 20 752.0 21 1061.0 22 1574.0 23 2255.0 24 3013.0 25 4497.0 26 6373.0 27 9109.0 28 12251.0 29 16582.0 30 21687.0 31 28491.0 32 37545.0 33 54271.0 34 114453.0 35 225809.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.07994354926601 17.348441047220227 11.625969554286728 24.945645849227034 2 16.25709791991257 20.419118787243313 37.622113758703954 25.701669534140166 3 18.870831726395547 25.338379579311376 28.496035399993723 27.29475329429935 4 12.390928498545097 15.795601528523271 35.88007255134594 35.93339742158568 5 14.28885096176023 36.94487753125144 33.08067715300521 15.685594353983118 6 32.96664772349863 35.66789428236145 17.425807975319756 13.93965001882016 7 29.43715116010886 31.269892522717836 21.08455187047373 18.20840444669957 8 28.53305041745468 31.84039854236819 19.89261497301536 19.73393606716177 9 28.0924396881775 14.40675307901656 18.91101988099082 38.58978735181512 10 16.161476380785793 26.715672707546855 31.189688066217197 25.933162845450152 11 36.522703411831344 22.033075814579117 22.140462426679115 19.30375834691042 12 25.245264010539387 24.305169871966374 28.488081377648456 21.961484739845787 13 29.764956200325155 19.785421268538972 25.31043607757165 25.13918645356423 14 24.26535037136135 20.033030400885732 25.668496563177563 30.033122664575355 15 25.20065775510618 26.583899764322876 23.862262684947485 24.353179795623454 16 25.204549732249294 26.174061949874705 24.339296061056757 24.282092256819247 17 23.452563742931805 25.7762095285902 25.97275331079385 24.798473417684143 18 24.584694926294073 24.648353817965095 27.24047007939832 23.52648117634251 19 24.907368452130527 25.465187514300684 26.800594908586316 22.82684912498247 20 25.42513303859411 23.724785403765676 26.62875405020408 24.22132750743614 21 26.86077215332353 24.117105430685005 25.336799898143518 23.68532251784795 22 25.386298801707945 24.34632743967022 25.94854023892032 24.318833519701517 23 23.677489832522642 24.281818114717193 26.57826558705649 25.46242646570368 24 24.058446531351898 25.655428983736762 26.122491912669748 24.16363257224159 25 24.38552233600242 24.589625435749046 26.254375944622733 24.7704762836258 26 23.756313702187025 25.395984697634333 26.686129878182683 24.16157172199595 27 24.898740974337873 25.29049115471272 25.714718033978745 24.09604983697066 28 23.80426057994815 24.808052477649948 26.87025436160496 24.517432580796942 29 23.653665881797178 25.49251175458927 26.963034861491447 23.890787502122098 30 24.037847671977 25.443112247722166 26.851698089533954 23.66734199076688 31 24.052116085794843 25.541753391494325 25.714280442259717 24.69185008045112 32 23.513119533527696 25.769088829021662 25.723511827877626 24.994279809573015 33 23.509113790443713 25.10324287817894 26.27443599310607 25.113207338271277 34 24.078523423054353 25.484312661698976 26.515679956892573 23.92148395835409 35 25.113400235473883 25.216927545646133 26.32564782998638 23.344024388893605 36 23.852863941774483 26.185058673944855 25.702860158739828 24.259217225540837 37 24.529503051148954 26.113664755585162 25.810302863669833 23.54652932959605 38 23.872252247930135 25.846629627101002 26.145000488981314 24.136117635987546 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 858.0 1 611.5 2 365.0 3 365.0 4 760.0 5 1155.0 6 1155.0 7 1303.0 8 1451.0 9 1327.5 10 1204.0 11 1204.0 12 1509.5 13 1815.0 14 2194.0 15 2573.0 16 2573.0 17 3633.0 18 4693.0 19 4693.0 20 5298.0 21 5903.0 22 5590.0 23 5277.0 24 5277.0 25 5672.5 26 6068.0 27 6068.0 28 7558.0 29 9048.0 30 10992.5 31 12937.0 32 12937.0 33 15750.0 34 18563.0 35 18563.0 36 20227.0 37 21891.0 38 25275.0 39 28659.0 40 28659.0 41 30980.0 42 33301.0 43 37763.5 44 42226.0 45 42226.0 46 45588.5 47 48951.0 48 48951.0 49 49658.0 50 50365.0 51 49341.0 52 48317.0 53 48317.0 54 45810.0 55 43303.0 56 43303.0 57 42157.5 58 41012.0 59 36517.0 60 32022.0 61 32022.0 62 30386.5 63 28751.0 64 23709.5 65 18668.0 66 18668.0 67 15507.0 68 12346.0 69 12346.0 70 9998.5 71 7651.0 72 6022.0 73 4393.0 74 4393.0 75 3290.5 76 2188.0 77 2188.0 78 2191.5 79 2195.0 80 1719.5 81 1244.0 82 1244.0 83 1247.5 84 1251.0 85 1251.0 86 846.0 87 441.0 88 369.0 89 297.0 90 297.0 91 217.0 92 137.0 93 121.5 94 106.0 95 106.0 96 92.0 97 78.0 98 78.0 99 175.0 100 272.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11402739978781308 2 0.0492642649568707 3 0.009963559204760367 4 0.002583144979011947 5 0.0 6 5.535310669311315E-4 7 0.0 8 0.0 9 0.0 10 1.845103556437105E-4 11 0.001476082845149684 12 0.001476082845149684 13 0.014022787028921999 14 0.009225517782185525 15 0.024355366944969786 16 0.009779048849116657 17 0.020480649476451868 18 0.004428248535449052 19 0.007933945292679552 20 0.0049817796023801835 21 0.006642372803173578 22 0.006826883158817289 23 0.009410028137829235 24 0.01439180774020942 25 0.016974952719221368 26 0.018082014853083632 27 0.008856497070898105 28 0.005535310669311315 29 0.01088611098297892 30 0.0023986346233682366 31 0.005719821024955026 32 0.006457862447529868 33 0.009041007426541816 34 0.013469255961990867 35 0.016421421652290234 36 0.015129849162784263 37 0.008856497070898105 38 0.005904331380598736 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 541975.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.9689089728851 #Duplication Level Percentage of deduplicated Percentage of total 1 84.597161410391 52.42393794804989 2 10.352719533027809 12.830934687280198 3 2.3880734083760853 4.439589109926753 4 0.9032702683170397 2.2389869214100857 5 0.40988257742388695 1.2699988064976193 6 0.23793254324477936 0.8846652068413668 7 0.16322805645449168 0.7080545200574543 8 0.10470034257825751 0.5190532798929541 9 0.08145504721977585 0.4542912365889913 >10 0.5812357240481857 7.285598274339966 >50 0.09628127725324231 4.257788614018294 >100 0.07809812289485368 9.253347368140039 >500 0.004173182139419634 1.548874469634167 >1k 0.0017885066311798432 1.8848795573222468 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3280 0.6051939665113705 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2228 0.411089072374187 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1304 0.24060150375939848 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1291 0.23820286913603028 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1053 0.19428940449282714 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1048 0.1933668527146086 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 822 0.15166751233913003 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 731 0.13487706997555238 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 625 0.11531897227731906 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 616 0.11365837907652566 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 614 0.11328935836523825 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 589 0.1086765994741455 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 584 0.10775404769592693 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 568 0.10480188200562757 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 557 0.10277226809354675 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 557 0.10277226809354675 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 556 0.10258775773790303 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 543 0.1001891231145348 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.845103556437105E-4 2 0.0 0.0 0.0 0.0 1.845103556437105E-4 3 0.0 0.0 0.0 0.0 1.845103556437105E-4 4 0.0 0.0 0.0 0.0 1.845103556437105E-4 5 0.0 0.0 0.0 0.0 1.845103556437105E-4 6 0.0 0.0 0.0 0.0 1.845103556437105E-4 7 0.0 0.0 0.0 0.0 1.845103556437105E-4 8 0.0 0.0 0.0 0.0 1.845103556437105E-4 9 0.0 0.0 0.0 0.0 1.845103556437105E-4 10 0.0 0.0 0.0 0.0 1.845103556437105E-4 11 0.0 0.0 0.0 0.0 1.845103556437105E-4 12 0.0 0.0 0.0 0.0 1.845103556437105E-4 13 0.0 0.0 0.0 0.0 1.845103556437105E-4 14 0.0 0.0 0.0 0.0 1.845103556437105E-4 15 0.0 0.0 0.0 0.0 1.845103556437105E-4 16 0.0 0.0 0.0 1.845103556437105E-4 1.845103556437105E-4 17 0.0 0.0 0.0 1.845103556437105E-4 1.845103556437105E-4 18 0.0 0.0 0.0 3.69020711287421E-4 1.845103556437105E-4 19 0.0 0.0 0.0 3.69020711287421E-4 1.845103556437105E-4 20 0.0 0.0 0.0 7.38041422574842E-4 1.845103556437105E-4 21 0.0 0.0 0.0 0.0016605932007933946 1.845103556437105E-4 22 0.0 0.0 0.0 0.002583144979011947 1.845103556437105E-4 23 0.0 0.0 0.0 0.005350800313667604 3.69020711287421E-4 24 0.0 0.0 0.0 0.008671986715254393 3.69020711287421E-4 25 0.0 0.0 0.0 0.01125513169426634 3.69020711287421E-4 26 0.0 0.0 0.0 0.014945338807140551 3.69020711287421E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGATAAT 30 8.428823E-4 26.657055 6 GGCGGGT 70 3.079367E-8 22.85523 32 GTCCTAT 155 0.0 20.656778 1 CCTATAC 40 0.00448983 19.992792 3 TAGTCAG 40 0.00448983 19.992792 5 CCTATTC 180 0.0 19.548508 3 TACCGTC 100 3.254172E-9 19.198395 7 CATCGTT 125 7.2759576E-12 19.198393 28 CTATTCC 195 0.0 18.864994 4 ATCGTTT 120 8.185452E-11 18.665104 29 ATACCGT 115 9.422365E-10 18.080439 6 CCCTATA 45 0.008829867 17.782854 2 GCATTCG 225 0.0 17.777933 22 CTATACC 45 0.008862793 17.771372 4 TAAGGCT 45 0.008862793 17.771372 4 ATTCGTA 235 0.0 17.702282 24 GTAAACG 155 0.0 17.54692 27 AAACGCT 160 1.8189894E-12 16.998579 29 AAGACGG 160 1.8189894E-12 16.993874 5 TCTTTCG 180 0.0 16.890594 10 >>END_MODULE