##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062893_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1441059 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2018737608939 32.0 32.0 32.0 32.0 32.0 2 31.25270651652708 32.0 32.0 32.0 32.0 32.0 3 31.35618527763263 32.0 32.0 32.0 32.0 32.0 4 31.457582930331096 32.0 32.0 32.0 32.0 32.0 5 31.371113882221337 32.0 32.0 32.0 32.0 32.0 6 34.90701074695762 36.0 36.0 36.0 36.0 36.0 7 34.9275727086816 36.0 36.0 36.0 36.0 36.0 8 34.865326124745756 36.0 36.0 36.0 32.0 36.0 9 34.989036534937156 36.0 36.0 36.0 36.0 36.0 10 34.815398953130995 36.0 36.0 36.0 32.0 36.0 11 34.99988550087124 36.0 36.0 36.0 36.0 36.0 12 34.899979112583175 36.0 36.0 36.0 32.0 36.0 13 34.95561389228338 36.0 36.0 36.0 36.0 36.0 14 34.89697437787072 36.0 36.0 36.0 32.0 36.0 15 34.86427620243168 36.0 36.0 36.0 32.0 36.0 16 34.87315855908745 36.0 36.0 36.0 32.0 36.0 17 34.838891398617264 36.0 36.0 36.0 32.0 36.0 18 34.84453030722545 36.0 36.0 36.0 32.0 36.0 19 34.835261429268336 36.0 36.0 36.0 32.0 36.0 20 34.8244603447881 36.0 36.0 36.0 32.0 36.0 21 34.81466199510221 36.0 36.0 36.0 32.0 36.0 22 34.7962866197706 36.0 36.0 36.0 32.0 36.0 23 34.74228119736944 36.0 36.0 36.0 32.0 36.0 24 34.71979773208453 36.0 36.0 36.0 32.0 36.0 25 34.69795407405248 36.0 36.0 36.0 32.0 36.0 26 34.63095751110815 36.0 36.0 36.0 32.0 36.0 27 34.60665802024761 36.0 36.0 36.0 32.0 36.0 28 34.57409793769721 36.0 36.0 36.0 32.0 36.0 29 34.54368211155823 36.0 36.0 36.0 32.0 36.0 30 34.52078853121211 36.0 36.0 36.0 32.0 36.0 31 34.51806137014515 36.0 36.0 36.0 32.0 36.0 32 34.48595720230747 36.0 36.0 36.0 32.0 36.0 33 34.4543235217989 36.0 36.0 36.0 32.0 36.0 34 34.452509578025605 36.0 36.0 36.0 32.0 36.0 35 34.407920147613666 36.0 36.0 36.0 32.0 36.0 36 34.37604012049472 36.0 36.0 36.0 32.0 36.0 37 34.37330255041605 36.0 36.0 36.0 32.0 36.0 38 33.93755217517118 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 7.0 21 23.0 22 103.0 23 323.0 24 890.0 25 2349.0 26 4879.0 27 9671.0 28 16949.0 29 26719.0 30 40831.0 31 59351.0 32 85837.0 33 136792.0 34 331165.0 35 725168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.18363517249803 18.1682980046414 12.007822649596376 26.640244173264193 2 15.975196019038776 20.177661011797575 36.459506515694365 27.387636453469288 3 18.440258171247674 23.79555590714884 28.322157524431685 29.442028397171804 4 12.388883722931347 15.683893361682873 35.56192741721707 36.365295498168706 5 14.476377772442191 36.62468824988307 33.063693480762055 15.835240496912684 6 35.14184379937782 35.23143081779555 16.115878830608366 13.510846552218267 7 30.7334022182421 30.23376688264329 20.2087226614464 18.824108237668202 8 28.326525740473187 32.90850067798351 18.97382303589496 19.791150545648346 9 27.22088210719748 14.279349675642816 18.188915506133224 40.31085271102648 10 15.966885142379313 26.515688267888926 31.191878116228157 26.325548473503602 11 38.11461957136502 21.05860333811476 21.509195395119892 19.317581695400325 12 24.891659085404907 23.53563678782113 28.16627840891348 23.406425717860483 13 29.519692169972693 19.034734968477956 25.19091915298167 26.254653708567684 14 23.621864198481813 19.43640059150944 24.729591224231623 32.212143985777125 15 25.393616777661425 26.70792798906915 22.146074518808735 25.75238071446069 16 26.170998093760346 25.72160573801036 23.16133227207529 24.946063896154 17 24.41843116763436 25.780554439478188 24.743886266974496 25.057128125912957 18 25.395976153648114 24.49129424957618 25.83058708907824 24.28214250769746 19 25.625182591413676 24.998976447182244 25.1273542582226 24.24848670318148 20 25.818165668442443 24.11122653548536 24.97538268731537 25.095225108756825 21 26.76378968522455 24.25570361796429 24.352646213652598 24.627860483158567 22 25.71234071609837 24.20289523190931 24.91577374694582 25.168990305046496 23 24.376967739652216 23.98156353287899 25.4796305767225 26.16183815074629 24 24.935342688953057 25.03325679240059 24.88260369630945 25.148796822336905 25 25.14437309254728 24.301103772367245 25.082265946270034 25.47225718881544 26 24.792600441758456 25.08786940715127 25.433032235321384 24.68649791576889 27 25.53679310617616 24.63481691923573 24.65903523661088 25.169354737977233 28 24.77518269550379 24.38713473910506 25.58403229846939 25.253650266921756 29 24.659365091921984 24.790379852594516 25.544755627632178 25.005499427851323 30 24.877884944336078 24.773725433864957 25.673202832083902 24.675186789715063 31 25.177109334177157 24.7040544488463 24.682681278143363 25.436154938833177 32 24.9543564836693 24.72334581720804 24.59968675814106 25.7226109409816 33 24.476305272719575 24.34501293840155 25.35017650214183 25.828505286737048 34 25.3181861394988 24.515373763322668 25.42352533796326 24.74291475921527 35 25.891583897675254 24.357087391980482 25.232762850098432 24.518565860245833 36 24.749229559650228 25.03991855989241 24.95088681310064 25.259965067356717 37 25.75862612148427 24.814459366341005 24.72993819128849 24.69697632088624 38 24.8289798189941 24.45141000570414 25.241662722805053 25.477947452496707 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 46.0 1 67.0 2 88.0 3 88.0 4 331.0 5 574.0 6 574.0 7 782.0 8 990.0 9 1037.5 10 1085.0 11 1085.0 12 1378.5 13 1672.0 14 2350.0 15 3028.0 16 3028.0 17 4462.5 18 5897.0 19 5897.0 20 7299.0 21 8701.0 22 9579.0 23 10457.0 24 10457.0 25 12367.0 26 14277.0 27 14277.0 28 18023.5 29 21770.0 30 26022.5 31 30275.0 32 30275.0 33 38331.5 34 46388.0 35 46388.0 36 51989.0 37 57590.0 38 65827.0 39 74064.0 40 74064.0 41 79839.0 42 85614.0 43 97124.5 44 108635.0 45 108635.0 46 115095.0 47 121555.0 48 121555.0 49 128589.5 50 135624.0 51 136450.0 52 137276.0 53 137276.0 54 132831.0 55 128386.0 56 128386.0 57 124063.5 58 119741.0 59 108498.5 60 97256.0 61 97256.0 62 90408.0 63 83560.0 64 69376.0 65 55192.0 66 55192.0 67 46289.5 68 37387.0 69 37387.0 70 29805.0 71 22223.0 72 17252.5 73 12282.0 74 12282.0 75 9313.5 76 6345.0 77 6345.0 78 6090.0 79 5835.0 80 4521.5 81 3208.0 82 3208.0 83 2942.0 84 2676.0 85 2676.0 86 1707.5 87 739.0 88 595.0 89 451.0 90 451.0 91 275.0 92 99.0 93 68.5 94 38.0 95 38.0 96 30.0 97 22.0 98 22.0 99 17.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007980242307913832 2 0.0 3 0.0 4 6.939341137316377E-5 5 6.939341137316377E-5 6 1.3878682274632754E-4 7 5.551472909853102E-4 8 0.001457261638836439 9 0.003816637625524007 10 9.715077592242926E-4 11 0.004579965150628809 12 4.163604682389826E-4 13 2.775736454926551E-4 14 0.0 15 0.0 16 1.3878682274632754E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 1.3878682274632754E-4 24 0.0 25 6.939341137316377E-5 26 0.0 27 6.939341137316377E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 6.939341137316377E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1441059.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.37872204591762 #Duplication Level Percentage of deduplicated Percentage of total 1 80.1817888656829 45.20546787602788 2 12.199244370206065 13.755556150361462 3 3.4281100641138726 5.798173933424666 4 1.4070093412631257 3.1730155426833364 5 0.7155622958420957 2.017124389191009 6 0.44630347851864266 1.509721185811723 7 0.32208295808138765 1.2711037898578241 8 0.20914727475155945 0.9433164855903469 9 0.15320270813449874 0.7773635608737072 >10 0.7809287613545557 7.834330169648752 >50 0.07053790351444338 2.7777865776209363 >100 0.07433234695011962 8.927133868276602 >500 0.00853394294191665 3.3431756457835644 >1k 0.003215688644780187 2.6667308248481936 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3706 0.2571719825489449 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2453 0.17022203809837072 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1975 0.13705198746199843 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1846 0.12810023739486032 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1562 0.1083925085648818 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1553 0.10776796786252332 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1538 0.10672706669192587 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1486 0.10311860930052134 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1478 0.10256346200953603 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.939341137316377E-5 2 0.0 0.0 0.0 0.0 6.939341137316377E-5 3 0.0 0.0 0.0 0.0 6.939341137316377E-5 4 0.0 0.0 0.0 0.0 6.939341137316377E-5 5 0.0 0.0 0.0 0.0 6.939341137316377E-5 6 0.0 0.0 0.0 0.0 6.939341137316377E-5 7 0.0 0.0 0.0 0.0 6.939341137316377E-5 8 0.0 0.0 0.0 0.0 6.939341137316377E-5 9 0.0 0.0 0.0 0.0 1.3878682274632754E-4 10 0.0 0.0 0.0 0.0 1.3878682274632754E-4 11 0.0 0.0 0.0 0.0 1.3878682274632754E-4 12 0.0 0.0 0.0 6.939341137316377E-5 2.775736454926551E-4 13 0.0 0.0 0.0 6.939341137316377E-5 4.163604682389826E-4 14 0.0 0.0 0.0 6.939341137316377E-5 4.163604682389826E-4 15 0.0 0.0 0.0 1.3878682274632754E-4 6.245407023584738E-4 16 0.0 0.0 0.0 2.081802341194913E-4 6.245407023584738E-4 17 0.0 0.0 0.0 3.469670568658188E-4 6.245407023584738E-4 18 0.0 0.0 0.0 4.163604682389826E-4 6.245407023584738E-4 19 0.0 0.0 0.0 4.8575387961214637E-4 6.245407023584738E-4 20 0.0 0.0 0.0 8.327209364779652E-4 7.633275251048014E-4 21 0.0 0.0 0.0 9.02114347851129E-4 7.633275251048014E-4 22 0.0 0.0 0.0 0.001179687993343784 7.633275251048014E-4 23 6.939341137316377E-5 0.0 0.0 0.0015266550502096028 7.633275251048014E-4 24 6.939341137316377E-5 0.0 0.0 0.0018736221070754216 7.633275251048014E-4 25 6.939341137316377E-5 0.0 0.0 0.0022205891639412406 7.633275251048014E-4 26 6.939341137316377E-5 0.0 0.0 0.002914523277672878 8.327209364779652E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCGAT 40 0.0044823624 20.00128 11 ACGATTA 40 0.0044850637 19.999197 32 ATCGTTT 240 0.0 18.665918 29 TCTAGCG 330 0.0 18.423504 28 CTAGCGG 335 0.0 18.148527 29 CATCGTT 260 0.0 17.845438 28 CGTCGTA 280 0.0 17.71542 10 TCGCGTA 145 3.6379788E-12 17.657528 9 CGTCTTA 120 1.6607373E-9 17.332638 15 GTATTAG 370 0.0 16.432913 1 AACCGCG 225 0.0 16.357738 7 TACCGTC 315 0.0 16.256136 7 GCGCAAG 435 0.0 16.184381 1 ACCGTCG 310 0.0 16.002134 8 CGCGTAA 160 1.8189894E-11 16.001024 10 GTCTAGG 160 1.8189894E-11 16.00047 1 CAAGACG 450 0.0 16.00047 4 TAGCGGC 380 0.0 15.999357 30 TAGCGTA 335 0.0 15.763298 7 CGCAAGA 470 0.0 15.318535 2 >>END_MODULE