##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062889_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 954273 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.205862473317385 32.0 32.0 32.0 32.0 32.0 2 31.30967134142955 32.0 32.0 32.0 32.0 32.0 3 31.40148888211235 32.0 32.0 32.0 32.0 32.0 4 31.49657173576115 32.0 32.0 32.0 32.0 32.0 5 31.418067995217303 32.0 32.0 32.0 32.0 32.0 6 34.97215576674599 36.0 36.0 36.0 36.0 36.0 7 35.00241649926174 36.0 36.0 36.0 36.0 36.0 8 34.9319272367551 36.0 36.0 36.0 36.0 36.0 9 35.04610735083147 36.0 36.0 36.0 36.0 36.0 10 34.897842650897594 36.0 36.0 36.0 32.0 36.0 11 35.068465732552426 36.0 36.0 36.0 36.0 36.0 12 34.97606135770372 36.0 36.0 36.0 36.0 36.0 13 35.02016823278035 36.0 36.0 36.0 36.0 36.0 14 34.9668103362455 36.0 36.0 36.0 36.0 36.0 15 34.93551950018496 36.0 36.0 36.0 36.0 36.0 16 34.939787670823755 36.0 36.0 36.0 36.0 36.0 17 34.91478748743808 36.0 36.0 36.0 32.0 36.0 18 34.91557133021683 36.0 36.0 36.0 32.0 36.0 19 34.907208943352686 36.0 36.0 36.0 32.0 36.0 20 34.89169032341898 36.0 36.0 36.0 32.0 36.0 21 34.8738233189035 36.0 36.0 36.0 32.0 36.0 22 34.85713312647429 36.0 36.0 36.0 32.0 36.0 23 34.80212266301153 36.0 36.0 36.0 32.0 36.0 24 34.77977790422657 36.0 36.0 36.0 32.0 36.0 25 34.75485107511163 36.0 36.0 36.0 32.0 36.0 26 34.69339591500545 36.0 36.0 36.0 32.0 36.0 27 34.67542831034725 36.0 36.0 36.0 32.0 36.0 28 34.63602134818862 36.0 36.0 36.0 32.0 36.0 29 34.598650491002054 36.0 36.0 36.0 32.0 36.0 30 34.57230687654371 36.0 36.0 36.0 32.0 36.0 31 34.56916836167428 36.0 36.0 36.0 32.0 36.0 32 34.545595442813536 36.0 36.0 36.0 32.0 36.0 33 34.52005662949701 36.0 36.0 36.0 32.0 36.0 34 34.49943569607439 36.0 36.0 36.0 32.0 36.0 35 34.46612971340486 36.0 36.0 36.0 32.0 36.0 36 34.427548510751116 36.0 36.0 36.0 32.0 36.0 37 34.398644832244024 36.0 36.0 36.0 32.0 36.0 38 33.97971754414093 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 2.0 21 12.0 22 61.0 23 220.0 24 576.0 25 1388.0 26 2989.0 27 5767.0 28 10305.0 29 16613.0 30 25285.0 31 37108.0 32 54015.0 33 87232.0 34 217290.0 35 495409.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.39373297002725 18.27394676168518 11.749214001257597 26.583106267029972 2 15.599100047889861 20.013560060905004 37.70566703658177 26.68167285462336 3 18.688886723191374 24.07057519179522 28.259942385459922 28.98059569955348 4 11.819179247823731 15.684538249616722 36.387986221943244 36.1082962806163 5 13.681200243536178 37.42639684870053 33.70628740412859 15.186115503634703 6 34.723783914632214 35.92291917075967 16.30847002581028 13.044826888797836 7 30.43474160298784 30.244962631042853 20.54936349117858 18.77093227479073 8 27.910062058688528 34.050749378050796 18.902120810095383 19.137067753165287 9 27.26099964893344 13.975802606276233 18.372308708022658 40.390889036767675 10 15.739046601066784 26.661217475138066 31.740283148375198 25.859452775419957 11 38.08422943387684 20.8753263112446 22.127439278075343 18.91300497680321 12 24.977417292799732 23.74432812516374 28.741341549037486 22.536913032999045 13 29.91173366894729 19.2987107435938 25.233817228020133 25.555738359438774 14 22.93829962704593 20.3492082454392 24.79300996674956 31.919482160765316 15 24.737575096434668 28.595380986363438 21.96247824259934 24.704565674602552 16 25.47006988566165 25.80886182465605 24.62806764940431 24.093000640277992 17 23.595868268304773 26.716044570054905 25.469860302030973 24.218226859609356 18 24.762201173039582 24.446253849789315 27.413014933881602 23.3785300432895 19 25.531373097635583 25.051950542454833 25.345577209037668 24.07109915087192 20 25.828562685939975 24.284140911458252 25.57025086112674 24.31704554147503 21 26.421949320476052 24.40501702346608 24.31018023182094 24.86285342423693 22 25.613110713600822 25.31927446338731 25.18073968350776 23.886875139504106 23 23.373259140494827 24.958764291028746 26.228740293627588 25.439236274848838 24 24.673442505446555 25.114720839843525 25.909566759197837 24.30226989551208 25 24.421418189553723 25.121532307840628 25.828038726863277 24.629010775742373 26 23.59754493735021 26.1839117317581 26.326952559697276 23.89159077119441 27 24.788713502320615 25.273061272822346 25.498782843064827 24.43944238179221 28 23.616197880480744 25.290875881430157 26.137279373931776 24.955646864157323 29 23.789628334868535 25.346101168114366 25.934402419433432 24.92986807758367 30 23.733669505476946 25.305546735577767 26.62592360886245 24.33486015008284 31 24.980482524392915 25.0680884820172 25.080558708042666 24.870870285547216 32 24.084198127789428 25.52414246237712 25.306175486469805 25.08548392336365 33 23.41415926050512 25.19562012128605 26.38092034459741 25.00930027361143 34 24.489952036786118 25.340023242824643 26.39202827702345 23.777996443365787 35 25.250531032524236 25.164077784868688 26.074509076543084 23.51088210606399 36 23.575224280682782 25.75154070166504 26.08750326164525 24.58573175600693 37 25.11042437541458 25.559247720516037 25.095963104897656 24.234364799171725 38 24.01024026692599 25.492626840146205 25.759112705811344 24.73802018711646 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 32.0 1 51.0 2 70.0 3 70.0 4 227.0 5 384.0 6 384.0 7 496.5 8 609.0 9 671.5 10 734.0 11 734.0 12 952.0 13 1170.0 14 1585.5 15 2001.0 16 2001.0 17 2993.5 18 3986.0 19 3986.0 20 4891.5 21 5797.0 22 6507.5 23 7218.0 24 7218.0 25 8744.5 26 10271.0 27 10271.0 28 13487.5 29 16704.0 30 21634.0 31 26564.0 32 26564.0 33 33668.0 34 40772.0 35 40772.0 36 44858.0 37 48944.0 38 54515.5 39 60087.0 40 60087.0 41 61483.0 42 62879.0 43 68378.0 44 73877.0 45 73877.0 46 76174.0 47 78471.0 48 78471.0 49 81696.0 50 84921.0 51 85160.0 52 85399.0 53 85399.0 54 80225.5 55 75052.0 56 75052.0 57 72622.0 58 70192.0 59 62622.5 60 55053.0 61 55053.0 62 52796.0 63 50539.0 64 42315.5 65 34092.0 66 34092.0 67 28542.5 68 22993.0 69 22993.0 70 18594.5 71 14196.0 72 11245.0 73 8294.0 74 8294.0 75 6248.0 76 4202.0 77 4202.0 78 4026.5 79 3851.0 80 2969.0 81 2087.0 82 2087.0 83 1974.5 84 1862.0 85 1862.0 86 1176.5 87 491.0 88 416.5 89 342.0 90 342.0 91 212.5 92 83.0 93 58.5 94 34.0 95 34.0 96 22.5 97 11.0 98 11.0 99 10.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007649802519823993 2 0.0 3 0.0 4 2.0958363068010938E-4 5 0.0 6 2.0958363068010938E-4 7 5.239590767002734E-4 8 0.00157187723010082 9 0.003982088982922078 10 3.1437544602016404E-4 11 0.004820423505642515 12 3.1437544602016404E-4 13 2.0958363068010938E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 2.0958363068010938E-4 22 0.0 23 3.1437544602016404E-4 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.0479181534005469E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 954273.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.18587071570419 #Duplication Level Percentage of deduplicated Percentage of total 1 79.5221259370431 43.88497760999607 2 13.255698085426568 14.630544815775162 3 3.547039376127471 5.87239369303448 4 1.3328341816215252 2.9421445932974755 5 0.6484416292699637 1.7892407959786398 6 0.3349080940734334 1.1089316868707635 7 0.23197043783861 0.8961043414698779 8 0.1524972579737822 0.6732555170432426 9 0.10301660405579526 0.5116554893694604 >10 0.672762609546769 7.204908207138359 >50 0.09001202849832468 3.4709172190900777 >100 0.09515471149008951 10.850190805718292 >500 0.010297303378425741 3.8102212031114635 >1k 0.0032417436561710668 2.3545140221066614 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2404 0.25191952407749146 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1715 0.17971796330819376 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1701 0.17825087789343302 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1655 0.1734304543877905 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1303 0.13654373538809125 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1271 0.1331903972972095 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1266 0.13266643822050922 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1242 0.1301514346523479 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1201 0.1258549702234057 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1175 0.12313038302456424 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1103 0.11558537232008032 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1096 0.11485182961269993 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1076 0.11275599330589883 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1072 0.11233682604453862 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1061 0.11118411607579802 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1028 0.10772598616957621 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1005 0.10531577441675495 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 971 0.10175285269519309 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.0479181534005467E-4 0.0 11 0.0 0.0 0.0 1.0479181534005467E-4 0.0 12 0.0 0.0 0.0 1.0479181534005467E-4 2.0958363068010935E-4 13 0.0 0.0 0.0 1.0479181534005467E-4 3.1437544602016404E-4 14 0.0 0.0 0.0 2.0958363068010935E-4 3.1437544602016404E-4 15 0.0 0.0 0.0 3.1437544602016404E-4 4.191672613602187E-4 16 0.0 0.0 0.0 5.239590767002734E-4 5.239590767002734E-4 17 0.0 0.0 0.0 5.239590767002734E-4 5.239590767002734E-4 18 0.0 0.0 0.0 8.383345227204374E-4 6.287508920403281E-4 19 0.0 0.0 0.0 8.383345227204374E-4 6.287508920403281E-4 20 0.0 0.0 0.0 0.0011527099687406014 6.287508920403281E-4 21 0.0 0.0 0.0 0.0015718772301008203 6.287508920403281E-4 22 0.0 0.0 0.0 0.001991044491461039 6.287508920403281E-4 23 0.0 0.0 0.0 0.002410211752821258 6.287508920403281E-4 24 0.0 0.0 0.0 0.003248546275541695 6.287508920403281E-4 25 0.0 0.0 0.0 0.0034581299062218045 6.287508920403281E-4 26 0.0 0.0 0.0 0.004820423505642516 6.287508920403281E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCACCGT 60 1.7620187E-7 24.000982 6 AGCGGCG 195 0.0 22.153593 31 CTAGCGG 200 0.0 20.79976 29 GAGCGTT 70 7.778435E-7 20.572271 7 TAGCGGC 205 0.0 20.29245 30 TCTAGCG 215 0.0 20.09279 28 CTATACC 50 7.1927346E-4 19.200785 4 GTCTTAC 50 7.1952713E-4 19.199778 1 GTAGGAC 715 0.0 18.797974 3 GTAATAC 70 1.786113E-5 18.286463 3 GTAGTAC 45 0.0088471165 17.778507 3 ATCGTTT 225 0.0 17.777575 29 CATCGTT 225 0.0 17.777575 28 CGAGAAT 45 0.0088497875 17.777575 31 TGTAGGA 790 0.0 17.620052 2 TAGGACG 680 0.0 17.412477 4 AAGACGG 425 0.0 17.318356 5 GTTTTCG 380 0.0 17.26296 28 CAAGACG 450 0.0 17.067366 4 TTCGGAA 370 0.0 16.864672 31 >>END_MODULE