##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062887_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 367323 Sequences flagged as poor quality 0 Sequence length 38 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.961586941193445 32.0 32.0 32.0 32.0 32.0 2 30.657963155043383 32.0 32.0 32.0 32.0 32.0 3 30.76354053516932 32.0 32.0 32.0 32.0 32.0 4 30.79867854721866 32.0 32.0 32.0 32.0 32.0 5 30.79301323358461 32.0 32.0 32.0 32.0 32.0 6 34.340310843589975 36.0 36.0 36.0 32.0 36.0 7 34.155963552513725 36.0 36.0 36.0 32.0 36.0 8 34.1278520539144 36.0 36.0 36.0 32.0 36.0 9 34.22280935307617 36.0 36.0 36.0 32.0 36.0 10 34.03983687381405 36.0 36.0 36.0 32.0 36.0 11 34.37533451485477 36.0 36.0 36.0 32.0 36.0 12 34.1694911562848 36.0 36.0 36.0 32.0 36.0 13 34.27975923097655 36.0 36.0 36.0 32.0 36.0 14 34.188376442531506 36.0 36.0 36.0 32.0 36.0 15 34.18056043318823 36.0 36.0 36.0 32.0 36.0 16 34.15345894485235 36.0 36.0 36.0 32.0 36.0 17 34.077310704747596 36.0 36.0 36.0 32.0 36.0 18 34.1329674428228 36.0 36.0 36.0 32.0 36.0 19 34.078511282985275 36.0 36.0 36.0 32.0 36.0 20 34.00286396441279 36.0 36.0 36.0 32.0 36.0 21 33.95004941155332 36.0 36.0 36.0 32.0 36.0 22 33.95367564786305 36.0 36.0 36.0 32.0 36.0 23 33.946562017624814 36.0 36.0 36.0 32.0 36.0 24 33.920881621896804 36.0 36.0 36.0 32.0 36.0 25 33.92688723548485 36.0 36.0 36.0 32.0 36.0 26 33.90507809203344 36.0 36.0 36.0 32.0 36.0 27 33.894591408651245 36.0 36.0 36.0 32.0 36.0 28 33.89541901813935 36.0 36.0 36.0 32.0 36.0 29 33.83378116807279 36.0 36.0 36.0 32.0 36.0 30 33.75504392591806 36.0 36.0 36.0 27.0 36.0 31 33.760769132344016 36.0 36.0 36.0 27.0 36.0 32 33.71838409247447 36.0 36.0 36.0 27.0 36.0 33 33.65992328277837 36.0 36.0 36.0 27.0 36.0 34 33.59878635424408 36.0 36.0 36.0 27.0 36.0 35 33.51996471770077 36.0 36.0 36.0 21.0 36.0 36 33.45528050244608 36.0 36.0 36.0 21.0 36.0 37 33.42819807090762 36.0 36.0 36.0 21.0 36.0 38 32.81706563433273 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 1.0 11 0.0 12 4.0 13 3.0 14 92.0 15 187.0 16 220.0 17 254.0 18 318.0 19 445.0 20 567.0 21 796.0 22 1063.0 23 1467.0 24 2102.0 25 2906.0 26 4125.0 27 5974.0 28 8147.0 29 10868.0 30 14954.0 31 19425.0 32 25426.0 33 36971.0 34 78936.0 35 152070.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.829495398839896 21.57039120764098 12.995278904444154 22.60483448907497 2 13.876918383246256 22.92362423932052 41.46268380249846 21.73677357493476 3 16.618155184103117 29.528925822358122 31.84114009698666 22.0117788965521 4 9.27846278242262 19.129734041539503 42.13953766950802 29.45226550652985 5 9.906593960051291 41.774905328037335 36.05320686810718 12.265293843804193 6 25.60723289103294 42.79024942693332 20.072579371777348 11.529938310256396 7 25.10978076515764 35.998018093067955 22.921788180974236 15.970412960800168 8 25.639357294145192 34.816863678189705 21.384235085293014 18.15954394237209 9 27.00192201937265 16.04396142893701 22.291068871453383 34.66304768023696 10 15.304555675946444 27.305198164008686 34.546256418074606 22.84398974197026 11 31.122811507164073 25.413060582218726 26.41899820047425 17.045129710142955 12 22.845117432626314 29.650138708526967 30.592648856437354 16.912095002409362 13 25.68907258712279 23.22875058880548 29.309579626921956 21.772597197149775 14 21.137133397950407 25.496607603759408 28.48578242923886 24.88047656905133 15 22.790411432648295 30.43577713089108 27.578159676931836 19.195651759528793 16 21.54768938393555 29.436429129581278 28.434476956461367 20.58140453002181 17 18.91111782789954 28.930478516715276 29.604154242877257 22.554249412507932 18 19.50700237405528 27.277677346285365 33.315183063620324 19.90013721603903 19 21.247052801812153 29.13955425839509 30.57762361896879 19.035769320823963 20 20.898878851735084 28.18035295206669 31.43680132425089 19.483966871947334 21 23.792332677192153 26.47761088377589 28.4599195750601 21.27013686397186 22 21.38736349751294 29.267004445944877 28.97133413739685 20.374297919145334 23 20.95596443176311 28.8294935392356 30.026627170604474 20.187914858396816 24 20.509595068505085 30.7630312139232 29.435132544816923 19.2922411727548 25 21.168942560346355 28.747055860369496 30.6416522579679 19.44234932131625 26 18.608456978545775 28.94400771143127 32.9353269053253 19.512208404697656 27 20.358410838361177 30.63998823811287 29.706388447213083 19.295212476312866 28 18.95856531836287 28.88856823150495 31.762777667362734 20.390088782769446 29 19.57999689612642 28.800407315339942 31.1705142900706 20.449081498463038 30 20.421381045203585 28.514684903461866 31.70131439959054 19.362619651744005 31 20.254829092988118 28.396564163297533 30.52504049767904 20.82356624603531 32 17.841274162809693 30.628369180506397 30.95344405118432 20.576912605499594 33 19.159531167045564 29.86237220762602 30.688683483303613 20.289413142024802 34 19.08884968089046 29.430503822779848 32.860386852251196 18.6202596440785 35 20.90207343471335 30.20761575429186 29.761888554585923 19.12842225640886 36 19.325292019495194 29.470144580281538 30.54510305769597 20.659460342527296 37 21.202938325655353 29.976530423323638 28.343189466461922 20.477341784559087 38 19.26442401934093 31.197046588112297 29.68984819114412 19.848681201402652 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 491.0 1 393.0 2 295.0 3 295.0 4 666.5 5 1038.0 6 1038.0 7 1192.0 8 1346.0 9 1423.5 10 1501.0 11 1501.0 12 1800.0 13 2099.0 14 2600.5 15 3102.0 16 3102.0 17 4383.5 18 5665.0 19 5665.0 20 6556.5 21 7448.0 22 8389.5 23 9331.0 24 9331.0 25 10654.5 26 11978.0 27 11978.0 28 15399.0 29 18820.0 30 21832.5 31 24845.0 32 24845.0 33 27653.0 34 30461.0 35 30461.0 36 30658.5 37 30856.0 38 31915.5 39 32975.0 40 32975.0 41 31515.5 42 30056.0 43 31134.5 44 32213.0 45 32213.0 46 30844.0 47 29475.0 48 29475.0 49 26988.0 50 24501.0 51 19686.0 52 14871.0 53 14871.0 54 13866.5 55 12862.0 56 12862.0 57 11131.5 58 9401.0 59 8180.0 60 6959.0 61 6959.0 62 7214.0 63 7469.0 64 6538.0 65 5607.0 66 5607.0 67 5065.5 68 4524.0 69 4524.0 70 3625.0 71 2726.0 72 2106.5 73 1487.0 74 1487.0 75 1209.0 76 931.0 77 931.0 78 793.0 79 655.0 80 532.5 81 410.0 82 410.0 83 383.0 84 356.0 85 356.0 86 265.0 87 174.0 88 139.0 89 104.0 90 104.0 91 75.5 92 47.0 93 42.5 94 38.0 95 38.0 96 34.5 97 31.0 98 31.0 99 103.0 100 175.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12495814310565904 2 0.05907607201291506 3 0.01524543793881679 4 0.00272239963193157 5 5.44479926386314E-4 6 2.72239963193157E-4 7 0.0 8 2.72239963193157E-4 9 2.72239963193157E-4 10 2.72239963193157E-4 11 0.001088959852772628 12 0.0016334397791589418 13 0.014700958012430477 14 0.008439438858987866 15 0.025590556540156753 16 0.01088959852772628 17 0.022868156908225187 18 0.005172559300669983 19 0.006805999079828925 20 0.005717039227056297 21 0.006533759116635767 22 0.0059892791902494535 23 0.007894958932601552 24 0.013884238122851004 25 0.018512317497134674 26 0.020690237202679932 27 0.009528398711760495 28 0.0059892791902494535 29 0.01088959852772628 30 0.0019056797423520988 31 0.004900319337476825 32 0.00626151915344261 33 0.007622718969408395 34 0.013884238122851004 35 0.015789917865203104 36 0.01442871804923732 37 0.010617358564533122 38 0.005172559300669983 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 367323.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.914687135948967 #Duplication Level Percentage of deduplicated Percentage of total 1 75.14261250960143 20.975825187833692 2 11.96018602480727 6.677297019404882 3 3.8401834341796026 3.21592557329333 4 1.8856792829671165 2.1055258889107056 5 1.1095166862934107 1.5485905584997701 6 0.7709607621186638 1.2912677081181165 7 0.5971943054362334 1.1669344536935962 8 0.4783545783916227 1.0682494716680737 9 0.34353647787310265 0.8630741969652165 >10 2.9170641000563458 17.005851150190484 >50 0.46537208853163403 9.16180020730097 >100 0.4473963426226868 24.360659452767464 >500 0.0319568816159062 5.924435661206762 >1k 0.009986525504970686 4.634563470146923 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3591 0.9776137078266267 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2473 0.6732494289766772 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1664 0.4530072987534132 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAA 1496 0.40727098493696284 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1361 0.37051858990588665 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCT 1317 0.35854003152538777 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1311 0.3569065917462288 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTA 1243 0.33839427424909413 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1096 0.29837499965970005 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1073 0.29211348050625746 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAAC 943 0.25672228529114705 No Hit GATATATTTTGATCAACGGACCAAGTTACCCTAGGGAT 827 0.2251424495607408 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGG 819 0.22296452985519555 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGC 762 0.20744685195318563 No Hit GTTATATAATTTAAGCTCCATAGGGTCTTCTCGTCTTA 745 0.20281877257890193 No Hit CCTCTAGCATTACAAGTATTAGAGGCACTGCCTGCCCA 737 0.20064085287335667 No Hit CTGTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGC 719 0.19574053353587986 No Hit ATCTATAACTTTATAGATGCAACACTGTTAGTATGAGT 717 0.19519605360949355 No Hit GCCTAAAGGAAAGATCCAAAAAGATAAAAGGAACTCGG 714 0.1943793337199141 No Hit ATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGGT 707 0.192473653977562 No Hit TGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGTTCT 691 0.18811781456647148 No Hit CACTATAAATAATCCACCTATAACTTCTCTGTTAACCC 674 0.1834897351921878 No Hit ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCT 667 0.1815840554498357 No Hit GTACATGGGAGAAATCGTAAATAGATAGAAACCGACCT 666 0.18131181548664255 No Hit GTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTC 666 0.18131181548664255 No Hit GTTATAGATTAACCCAATTTTAAGTTTAGGAAGTTGGT 664 0.18076733556025623 No Hit CTATAGAACTAGTACCGCAAGGGAAAGATGAAAGACTA 644 0.1753225362963931 No Hit GTATCAACGCAGAGTACATGGGAGAAATCGTAAATAGA 641 0.17450581640681362 No Hit ACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCT 638 0.17368909651723413 No Hit CCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTA 635 0.17287237662765467 No Hit ATAAATAATCCACCTATAACTTCTCTGTTAACCCAACA 633 0.17232789670126836 No Hit GATTAAAGATAAGAGACAGTTGGACCCTCGTTTAGCCG 630 0.1715111768116889 No Hit GATTAAACCTTGTACCTTTTGCATAATGAACTAACTAG 629 0.17123893684849573 No Hit GATAGAAACCGACCTGGATTGCTCCGGTCTGAACTCAG 629 0.17123893684849573 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 620 0.16878877717975732 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATG 595 0.1619827780999284 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA 591 0.16089381824715576 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAA 555 0.1510931795722021 No Hit CTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATCC 546 0.1486430199034637 No Hit GACTATAGGCAATAATCACACTATAAATAATCCACCTA 523 0.1423815007500211 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAA 516 0.140475821007669 No Hit CCATTAATAGCTTCTACACCATTGGGATGTCCTGATCC 509 0.13857014126531692 No Hit TCCCAATGGTGTAGAAGCTATTAATGGTTCGTTTGTTC 500 0.1361199815965785 No Hit CCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTG 492 0.13394206189103322 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 490 0.13339758196464693 No Hit GTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGCAT 482 0.13121966225910164 No Hit GTGTAGAAGCTATTAATGGTTCGTTTGTTCAACGATTA 481 0.13094742229590853 No Hit AAATATATCTGGGTCAATAAGATATGTTGATTTTACTT 473 0.12876950259036324 No Hit GGTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGG 469 0.1276805427375906 No Hit GTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTC 461 0.12550262303204537 No Hit CTTTATTGGTGGCTGCTTTTAGGCCTACAATGGTTAAA 447 0.12169126354734117 No Hit CTATTAAAGGTTTTTTCCGTTCCAGAAGAGCTGTCCCT 447 0.12169126354734117 No Hit TACTAACAGTGTTGCATCTATAAAGTTATAGATTAACC 447 0.12169126354734117 No Hit AGGGATAACAGCGCAATCCTATTTAAGAGTTCATATCG 447 0.12169126354734117 No Hit ATTTAAGAGTTCATATCGACAATTAGGGTTTACGACCT 443 0.12060230369456854 No Hit GACCTGGATTGCTCCGGTCTGAACTCAGATCACGTAGG 439 0.11951334384179592 No Hit CTTAAATAGGATTGCGCTGTTATCCCTAGGGTAACTTG 431 0.11733542413625066 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 426 0.11597422432028488 No Hit TATCAACGCAGAGTACATGGGAGAAATCGTAAATAGAT 418 0.11379630461473961 No Hit GGATTGCTCCGGTCTGAACTCAGATCACGTAGGACTTT 417 0.11352406465154646 No Hit ATTATAACCTAGACTTACAAGTCAAAGTAAAATCAACA 413 0.11243510479877383 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 411 0.1118906248723875 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 410 0.11161838490919436 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 407 0.1108016650196149 No Hit CTATAGTATAAGTTTGAAATTTCGGTTGGGGTGACCTC 406 0.11052942505642173 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 403 0.10971270516684226 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 393 0.10699030553491069 No Hit GCTATCACCAAGCTCGTTAGGCTTTTCACCTCTACCTA 389 0.10590134568213806 No Hit CTCTTAAATAGGATTGCGCTGTTATCCCTAGGGTAACT 386 0.10508462579255859 No Hit ATTTCAGCCTCTTCACTGAAAGGTCAATTTCACTGATT 384 0.10454014586617227 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 379 0.10317894605020649 No Hit GTTTAAAATTGAACTTAAATTCATTTTTTGGGTAACCA 378 0.10290670608701334 No Hit AGCATGAACGGCTAAACGAGGGTCCAACTGTCTCTTAT 376 0.10236222616062701 No Hit GATAAAAGGAACTCGGCAAACAAGAACCCCGCCTGTTT 372 0.10127326630785441 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 368 0.10018430645508176 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 2.72239963193157E-4 0.0 4 0.0 0.0 0.0 2.72239963193157E-4 0.0 5 0.0 0.0 0.0 2.72239963193157E-4 0.0 6 0.0 0.0 0.0 2.72239963193157E-4 0.0 7 0.0 0.0 0.0 2.72239963193157E-4 0.0 8 0.0 0.0 0.0 2.72239963193157E-4 0.0 9 0.0 0.0 0.0 0.001361199815965785 0.0 10 0.0 0.0 0.0 0.001361199815965785 0.0 11 0.0 0.0 0.0 0.001361199815965785 0.0 12 0.0 0.0 0.0 0.0016334397791589418 0.0 13 0.0 0.0 0.0 0.0019056797423520988 0.0 14 0.0 0.0 0.0 0.002177919705545256 0.0 15 0.0 0.0 0.0 0.0024501596687384127 0.0 16 0.0 0.0 0.0 0.00272239963193157 0.0 17 0.0 0.0 0.0 0.00272239963193157 0.0 18 0.0 0.0 0.0 0.0032668795583178836 0.0 19 0.0 0.0 0.0 0.0032668795583178836 0.0 20 0.0 0.0 0.0 0.0046280793742836685 0.0 21 0.0 0.0 0.0 0.0046280793742836685 0.0 22 0.0 0.0 0.0 0.006533759116635767 0.0 23 0.0 0.0 0.0 0.008711678822181023 0.0 24 0.0 0.0 0.0 0.013067518233271534 0.0 25 0.0 0.0 0.0 0.014700958012430477 0.0 26 0.0 0.0 0.0 0.01687887771797573 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTACTA 20 0.0037518586 31.997143 32 GTTTAGA 145 0.0 23.189287 1 TCGGCAA 90 3.45608E-11 23.115341 13 GATAACG 35 0.002061685 22.861326 11 ATAACGA 35 0.002061685 22.861326 12 CGATAAC 35 0.0020633184 22.858213 10 TCCGATA 35 0.0020649526 22.8551 8 GGCAAAC 95 7.2759576E-11 21.898745 15 CAGTTCC 45 3.52608E-4 21.337238 17 TAAATTC 60 4.6986715E-6 21.337236 16 TTCCGAA 45 3.5325752E-4 21.331429 20 AGATTAT 150 0.0 21.328524 5 TATAGCC 160 0.0 21.000984 9 CGGCAAA 100 1.4370016E-10 20.803804 14 CTCGGCA 100 1.4370016E-10 20.803804 12 ACTTGCT 100 1.4370016E-10 20.798141 8 TTATAGC 155 0.0 20.643316 8 TGTAGGA 235 0.0 20.426489 2 CTAGGAC 55 5.823461E-5 20.361818 3 TAACGAA 40 0.004473031 20.00366 13 >>END_MODULE