SRR4062886_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062886_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	512475
Sequences flagged as poor quality	0
Sequence length	38
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT	2383	0.46499829259963904	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT	1737	0.33894336309088247	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA	1049	0.2046929118493585	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT	949	0.18517976486657886	No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC	855	0.166837406702766	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG	828	0.16156885701741547	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	802	0.15649543880189276	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT	798	0.15571491292258158	No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC	735	0.14342163032343042	No Hit
GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG	734	0.1432264988536026	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA	724	0.14127518415532464	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC	703	0.13717742328894092	No Hit
GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC	684	0.13346992536221278	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA	650	0.12683545538806773	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG	615	0.12000585394409483	No Hit
GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG	607	0.11844480218547247	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC	605	0.11805453924581687	No Hit
GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT	578	0.11278598956046637	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	518	0.10107810137079858	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTAATG	45	3.843379E-7	28.448608	3
CGTGATT	45	1.2367975E-5	24.887676	28
CCGTGAT	45	1.2367975E-5	24.887676	27
GTACGCC	35	0.0020655738	22.856028	4
GGTTCCG	55	5.8274047E-5	20.362642	8
CGACGAA	40	0.004481414	19.999025	32
GGACCGT	40	0.004481414	19.999025	6
TAGGACG	80	1.2627243E-7	19.999025	4
GCTCGCT	40	0.004481414	19.999025	11
TCCTATA	50	7.1625726E-4	19.210308	2
GACGTGA	60	1.1370451E-4	18.665756	7
GTGCTAT	45	0.008806546	17.790796	1
CTGAGCG	45	0.008846257	17.77691	28
TACATTG	45	0.008846257	17.77691	5
GGACGTG	90	4.3572982E-7	17.77691	6
AGGATAA	45	0.008846257	17.77691	5
GTAGTAC	55	0.0013619111	17.4571	3
GTTATTC	120	1.6480044E-9	17.335869	3
TCCGTGA	65	2.098326E-4	17.229929	26
AGGACGT	95	7.6758624E-7	16.841284	5