##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062886_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 512475 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.094586077369627 32.0 32.0 32.0 32.0 32.0 2 30.696502268403336 32.0 32.0 32.0 32.0 32.0 3 30.772455241719108 32.0 32.0 32.0 32.0 32.0 4 30.82635640762964 32.0 32.0 32.0 32.0 32.0 5 30.759697546221766 32.0 32.0 32.0 32.0 32.0 6 34.38461193228938 36.0 36.0 36.0 32.0 36.0 7 34.262992341089806 36.0 36.0 36.0 32.0 36.0 8 34.234497292550856 36.0 36.0 36.0 32.0 36.0 9 34.39553539197034 36.0 36.0 36.0 32.0 36.0 10 34.10193863115274 36.0 36.0 36.0 32.0 36.0 11 34.432825015854434 36.0 36.0 36.0 32.0 36.0 12 34.216320796136394 36.0 36.0 36.0 32.0 36.0 13 34.30575540270257 36.0 36.0 36.0 32.0 36.0 14 34.201533733352846 36.0 36.0 36.0 32.0 36.0 15 34.14928337967706 36.0 36.0 36.0 32.0 36.0 16 34.171826918386266 36.0 36.0 36.0 32.0 36.0 17 34.09957363773842 36.0 36.0 36.0 32.0 36.0 18 34.12828333089419 36.0 36.0 36.0 32.0 36.0 19 34.10394068003317 36.0 36.0 36.0 32.0 36.0 20 34.06089077515976 36.0 36.0 36.0 32.0 36.0 21 34.0424918288697 36.0 36.0 36.0 32.0 36.0 22 34.01322015708083 36.0 36.0 36.0 32.0 36.0 23 33.954760720035125 36.0 36.0 36.0 32.0 36.0 24 33.964489975120735 36.0 36.0 36.0 32.0 36.0 25 33.912618176496416 36.0 36.0 36.0 32.0 36.0 26 33.888685301722035 36.0 36.0 36.0 32.0 36.0 27 33.89409824869506 36.0 36.0 36.0 32.0 36.0 28 33.86116786184692 36.0 36.0 36.0 32.0 36.0 29 33.8242509390702 36.0 36.0 36.0 32.0 36.0 30 33.77897848675545 36.0 36.0 36.0 32.0 36.0 31 33.80684911459095 36.0 36.0 36.0 32.0 36.0 32 33.74745890043417 36.0 36.0 36.0 32.0 36.0 33 33.69774915849553 36.0 36.0 36.0 27.0 36.0 34 33.69500365871506 36.0 36.0 36.0 27.0 36.0 35 33.644638275037806 36.0 36.0 36.0 27.0 36.0 36 33.5994321674228 36.0 36.0 36.0 27.0 36.0 37 33.57256646665691 36.0 36.0 36.0 27.0 36.0 38 32.971179081906435 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 0.0 11 8.0 12 7.0 13 5.0 14 102.0 15 204.0 16 277.0 17 289.0 18 402.0 19 478.0 20 618.0 21 822.0 22 1244.0 23 1855.0 24 2705.0 25 3967.0 26 5717.0 27 8217.0 28 11175.0 29 15100.0 30 20268.0 31 26782.0 32 35977.0 33 52248.0 34 111004.0 35 213002.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.04545214787088 17.7850624854702 11.70589143137343 24.463593935285488 2 15.980039592826436 20.759682476464917 38.24417138149289 25.016106549215756 3 18.88155558070824 25.686635728866218 28.754200606526602 26.677608083898946 4 11.9544006993662 16.248165724811887 36.96708451715633 34.83034905866558 5 13.703524471485382 37.852261773280205 33.72014970515577 14.724064050078638 6 32.14972857159582 36.72244835835574 17.96891159356377 13.158911476484661 7 28.846870579052634 31.400360993219184 21.614127518415533 18.13864090931265 8 27.93346016878872 32.886677398897504 20.268110639543394 18.911751792770378 9 27.608566271525444 14.326747646226645 19.19352163520172 38.8711644470462 10 15.908124119467523 27.164304920835008 32.0203561546537 24.90721480504377 11 36.693536584651945 22.118801332373277 22.540680509455203 18.646981573519568 12 24.00569013358935 24.959704643820274 29.609378963677592 21.425226258912787 13 29.22877561933311 20.360027009832045 25.794779920609827 24.61641745022502 14 23.750822052271793 20.369138059898095 25.728626153068575 30.15141373476154 15 24.65845128149079 27.458955602570008 23.99623710897551 23.88635600696369 16 24.77855382327629 26.41351841335449 25.24964531533272 23.5582824480365 17 22.921724603626885 26.278308183514316 26.43677936595914 24.363187846899663 18 24.232560771664023 25.244559967684715 27.75367791261994 22.769201348031324 19 24.132682332829862 26.139153309057416 26.875041468107607 22.85312289000511 20 24.83534882631765 24.518438004320448 26.844922499302363 23.801290670059537 21 26.484650030052066 24.664743854938294 25.39457970041605 23.456026414593595 22 25.139479471783094 25.067471182048273 26.292197540790063 23.50085180537857 23 23.4796150153385 25.06322740791045 26.65835343340437 24.798804143346683 24 23.345875226378567 26.33231593080622 26.579380815587335 23.742428027227877 25 24.187643199231847 25.127927899796642 26.509471153283187 24.174957747688318 26 23.330548963277543 26.13742817886585 27.312328253809643 23.219694604046964 27 24.627904026852185 25.540019709816853 26.31533755500698 23.516738708323984 28 23.290603711213063 25.790959845603545 27.27482061559537 23.643615827588025 29 22.966722870123178 26.026883986698518 27.23467284904688 23.771720294131423 30 23.39167935058346 26.151504507668893 27.63747414432346 22.81934199742419 31 23.408332520245878 26.24158454483364 26.169577519758025 24.180505415162454 32 23.5619892124798 26.156809329409654 26.13436785287758 24.146833605232963 33 23.18222621184919 25.738232768714386 26.674732651627508 24.404808367808915 34 24.032473678561324 26.272259789428492 26.749412097616187 22.945854434393997 35 24.76688225260635 25.50126658365892 26.928466321364862 22.80338484236986 36 23.04185507336884 26.537486509852442 26.497674718146175 23.922983698632542 37 24.1436778917459 26.696251541692035 26.26418746975161 22.895883096810454 38 23.029638360484267 26.392737547907675 26.473526863423125 24.104097228184933 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 607.0 1 427.5 2 248.0 3 248.0 4 580.0 5 912.0 6 912.0 7 998.0 8 1084.0 9 1036.0 10 988.0 11 988.0 12 1267.5 13 1547.0 14 1889.5 15 2232.0 16 2232.0 17 3122.5 18 4013.0 19 4013.0 20 4734.5 21 5456.0 22 5609.0 23 5762.0 24 5762.0 25 6662.0 26 7562.0 27 7562.0 28 9555.5 29 11549.0 30 13695.5 31 15842.0 32 15842.0 33 18235.0 34 20628.0 35 20628.0 36 22526.0 37 24424.0 38 27613.0 39 30802.0 40 30802.0 41 32239.0 42 33676.0 43 37520.0 44 41364.0 45 41364.0 46 43323.0 47 45282.0 48 45282.0 49 45697.5 50 46113.0 51 45092.0 52 44071.0 53 44071.0 54 40924.5 55 37778.0 56 37778.0 57 36429.0 58 35080.0 59 31207.5 60 27335.0 61 27335.0 62 25756.0 63 24177.0 64 20263.5 65 16350.0 66 16350.0 67 13979.5 68 11609.0 69 11609.0 70 9262.0 71 6915.0 72 5199.0 73 3483.0 74 3483.0 75 2697.0 76 1911.0 77 1911.0 78 1646.5 79 1382.0 80 1096.0 81 810.0 82 810.0 83 752.0 84 694.0 85 694.0 86 462.5 87 231.0 88 191.5 89 152.0 90 152.0 91 106.0 92 60.0 93 58.5 94 57.0 95 57.0 96 59.0 97 61.0 98 61.0 99 144.5 100 228.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1162983560173667 2 0.05092931362505488 3 0.009561442021562026 4 0.0021464461681057613 5 1.9513146982779649E-4 6 1.9513146982779649E-4 7 0.0 8 0.0 9 0.0 10 1.9513146982779649E-4 11 0.001170788818966779 12 0.0017561832284501682 13 0.013464071418117958 14 0.007414995853456266 15 0.020098541392263036 16 0.009366310551734232 17 0.01541538611639592 18 0.004683155275867116 19 0.006439338504317283 20 0.005463681155178301 21 0.006049075564661691 22 0.00663446997414508 23 0.007610127323284063 24 0.011512756719839992 25 0.015025123176740329 26 0.01775696375432948 27 0.007805258793111859 28 0.005463681155178301 29 0.00995170496121762 30 0.002926972047416947 31 0.004878286745694912 32 0.006049075564661691 33 0.006829601443972876 34 0.011707888189667788 35 0.014244597297429143 36 0.012488414068978975 37 0.00995170496121762 38 0.006049075564661691 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 512475.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.07652599433573 #Duplication Level Percentage of deduplicated Percentage of total 1 86.82851723586109 56.504982589491426 2 9.447885581880037 12.296711433214519 3 1.7767850138757317 3.4688098842549064 4 0.555610230192924 1.4462873435147472 5 0.26369975839221665 0.8580332090855571 6 0.1726473941144327 0.6741175578565324 7 0.10762316355679331 0.49026191205574143 8 0.08755819718498045 0.4558386636100443 9 0.06425117404181203 0.37631188779287134 >10 0.5321689956559937 7.193988342506051 >50 0.08825314427867233 4.086498314355365 >100 0.06897600566691063 8.804553371871354 >500 0.005120489503657112 2.330409524871509 >1k 9.036157947630199E-4 1.0131959655194573 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2383 0.46499829259963904 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1737 0.33894336309088247 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1049 0.2046929118493585 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 949 0.18517976486657886 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 855 0.166837406702766 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 828 0.16156885701741547 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 802 0.15649543880189276 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 798 0.15571491292258158 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 735 0.14342163032343042 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 734 0.1432264988536026 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 724 0.14127518415532464 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 703 0.13717742328894092 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 684 0.13346992536221278 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 650 0.12683545538806773 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 615 0.12000585394409483 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 607 0.11844480218547247 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 605 0.11805453924581687 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 578 0.11278598956046637 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 518 0.10107810137079858 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 1.9513146982779649E-4 0.0 19 0.0 0.0 0.0 1.9513146982779649E-4 0.0 20 0.0 0.0 0.0 3.9026293965559297E-4 0.0 21 0.0 0.0 0.0 0.0011707888189667788 0.0 22 0.0 0.0 0.0 0.0017561832284501682 0.0 23 0.0 0.0 0.0 0.0025367091077613544 0.0 24 0.0 0.0 0.0 0.004878286745694912 0.0 25 0.0 0.0 0.0 0.006829601443972877 0.0 26 0.0 0.0 0.0 0.009561442021562028 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAATG 45 3.843379E-7 28.448608 3 CGTGATT 45 1.2367975E-5 24.887676 28 CCGTGAT 45 1.2367975E-5 24.887676 27 GTACGCC 35 0.0020655738 22.856028 4 GGTTCCG 55 5.8274047E-5 20.362642 8 CGACGAA 40 0.004481414 19.999025 32 GGACCGT 40 0.004481414 19.999025 6 TAGGACG 80 1.2627243E-7 19.999025 4 GCTCGCT 40 0.004481414 19.999025 11 TCCTATA 50 7.1625726E-4 19.210308 2 GACGTGA 60 1.1370451E-4 18.665756 7 GTGCTAT 45 0.008806546 17.790796 1 CTGAGCG 45 0.008846257 17.77691 28 TACATTG 45 0.008846257 17.77691 5 GGACGTG 90 4.3572982E-7 17.77691 6 AGGATAA 45 0.008846257 17.77691 5 GTAGTAC 55 0.0013619111 17.4571 3 GTTATTC 120 1.6480044E-9 17.335869 3 TCCGTGA 65 2.098326E-4 17.229929 26 AGGACGT 95 7.6758624E-7 16.841284 5 >>END_MODULE