##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062882_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1109691 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17830008533907 32.0 32.0 32.0 32.0 32.0 2 30.71716450795762 32.0 32.0 32.0 32.0 32.0 3 30.765134618555976 32.0 32.0 32.0 32.0 32.0 4 30.844244929444322 32.0 32.0 32.0 32.0 32.0 5 30.737079961899305 32.0 32.0 32.0 32.0 32.0 6 34.3930103064727 36.0 36.0 36.0 32.0 36.0 7 34.31675574551835 36.0 36.0 36.0 32.0 36.0 8 34.28062947252884 36.0 36.0 36.0 32.0 36.0 9 34.446158435095896 36.0 36.0 36.0 32.0 36.0 10 34.119403509625656 36.0 36.0 36.0 32.0 36.0 11 34.4418013663263 36.0 36.0 36.0 32.0 36.0 12 34.22700373347175 36.0 36.0 36.0 32.0 36.0 13 34.32922768590536 36.0 36.0 36.0 32.0 36.0 14 34.20833457241701 36.0 36.0 36.0 32.0 36.0 15 34.1412465271864 36.0 36.0 36.0 32.0 36.0 16 34.1689632519323 36.0 36.0 36.0 32.0 36.0 17 34.08528410161027 36.0 36.0 36.0 32.0 36.0 18 34.10443177425067 36.0 36.0 36.0 32.0 36.0 19 34.104243433532396 36.0 36.0 36.0 32.0 36.0 20 34.09610423081741 36.0 36.0 36.0 32.0 36.0 21 34.063470822057674 36.0 36.0 36.0 32.0 36.0 22 34.05401053085949 36.0 36.0 36.0 32.0 36.0 23 33.992181607312304 36.0 36.0 36.0 32.0 36.0 24 33.95820368012357 36.0 36.0 36.0 32.0 36.0 25 33.950914263520204 36.0 36.0 36.0 32.0 36.0 26 33.902310643233115 36.0 36.0 36.0 32.0 36.0 27 33.92056527447731 36.0 36.0 36.0 32.0 36.0 28 33.893390141940415 36.0 36.0 36.0 32.0 36.0 29 33.85247695079081 36.0 36.0 36.0 32.0 36.0 30 33.825826288579435 36.0 36.0 36.0 32.0 36.0 31 33.85108647362193 36.0 36.0 36.0 32.0 36.0 32 33.79918193443039 36.0 36.0 36.0 32.0 36.0 33 33.77050908766495 36.0 36.0 36.0 32.0 36.0 34 33.77639270751948 36.0 36.0 36.0 32.0 36.0 35 33.72964726216578 36.0 36.0 36.0 27.0 36.0 36 33.68260714018587 36.0 36.0 36.0 27.0 36.0 37 33.68924952982407 36.0 36.0 36.0 27.0 36.0 38 33.069556299906914 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 7.0 10 13.0 11 11.0 12 5.0 13 5.0 14 128.0 15 281.0 16 386.0 17 451.0 18 524.0 19 730.0 20 1075.0 21 1481.0 22 2454.0 23 3884.0 24 5789.0 25 8550.0 26 12620.0 27 18002.0 28 24640.0 29 32921.0 30 43422.0 31 57300.0 32 77152.0 33 112696.0 34 241655.0 35 463506.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.11602220910992 17.22243574822217 11.135140304626416 25.526401738041493 2 16.820817900177083 19.820861179135214 36.79937678300291 26.558944137684794 3 18.575661932632393 24.01658684480431 28.80743073342983 28.600320489133473 4 12.574223252368522 15.350571662105207 36.13875974511089 35.93644534041539 5 14.789859473761046 36.33316091218597 33.5080374087805 15.368942205272482 6 33.9006710006254 35.764711819379535 16.887389766114016 13.447227413881043 7 30.147401393721314 30.769286224723817 20.971513691649296 18.111798689905566 8 28.285337860732024 32.299979814145956 19.75411106545263 19.660571259669386 9 27.637292971273936 14.136573400295038 18.817975126364235 39.4081585020668 10 16.276722577226593 26.039367786830365 31.117727579529035 26.566182056414007 11 37.364767501484685 21.28105559976317 22.37192733289296 18.982249565859185 12 24.942617506819662 24.048559061837913 28.236602415697078 22.772221015645346 13 29.220874615493464 19.064674608103005 25.478239160588316 26.23621161581522 14 23.93047080103499 19.992663871006698 24.821260714668743 31.255604613289567 15 25.404056291614573 26.73139619464647 22.459139185010056 25.405408328728896 16 26.10938219598958 25.642710302020895 23.386047970409866 24.861859531579665 17 24.121132039078226 25.608242516451597 25.145137259603032 25.125488184867145 18 25.240328073617395 24.368595269229626 26.234173764384312 24.156902892768663 19 25.782563124610782 24.8789869420354 25.362408310810018 23.976041622543804 20 25.74498611233776 24.097301954366277 24.905237658365312 25.252474274930652 21 27.373785620302442 23.987310971323517 24.26650565058308 24.372397757790957 22 25.968183243751824 24.034971034711482 24.830840552124904 25.166005169411793 23 24.403019510014566 23.70600152850077 25.55903834229765 26.331940619187012 24 24.879092949266806 25.091344983912105 24.98724685227078 25.042315214550303 25 25.111761249130243 24.145206704232866 25.31311175764393 25.429920288992957 26 24.767484305922967 25.177851184547922 25.65536572945349 24.399298780075622 27 25.454919055906082 24.543413666091983 24.755833895851904 25.24583338215003 28 24.53085079058953 24.448569999504333 25.887086962595134 25.133492247311008 29 24.526331063111094 24.75479526993474 25.720293119126737 24.998580547827427 30 24.58351732528275 24.934168431487404 25.951155769837335 24.531158473392512 31 25.21288685296951 24.690819527643075 24.54554548510445 25.550748134282962 32 24.630161850096478 24.76931021523837 24.56959986734042 26.030928067324737 33 24.353429435329424 24.31557744562156 25.33001076979231 26.000982349256702 34 25.369654364381955 24.41746654048939 25.51710152764634 24.695777567482313 35 26.139157677664976 24.2958114616982 25.25452814951546 24.310502711121366 36 24.683106208089985 25.14312495493547 24.755840363400388 25.417928473574158 37 25.76495091390354 24.876687686613234 24.672826949992835 24.685534449490394 38 24.679010287351918 24.598982529976613 25.491454243138385 25.23055293953308 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 504.0 1 383.0 2 262.0 3 262.0 4 576.0 5 890.0 6 890.0 7 1005.5 8 1121.0 9 1086.5 10 1052.0 11 1052.0 12 1408.0 13 1764.0 14 2253.5 15 2743.0 16 2743.0 17 4021.5 18 5300.0 19 5300.0 20 6303.5 21 7307.0 22 7965.5 23 8624.0 24 8624.0 25 9906.5 26 11189.0 27 11189.0 28 14398.5 29 17608.0 30 20865.5 31 24123.0 32 24123.0 33 30918.0 34 37713.0 35 37713.0 36 41622.5 37 45532.0 38 52115.0 39 58698.0 40 58698.0 41 62340.5 42 65983.0 43 75605.0 44 85227.0 45 85227.0 46 87696.0 47 90165.0 48 90165.0 49 96416.0 50 102667.0 51 103818.5 52 104970.0 53 104970.0 54 99753.5 55 94537.0 56 94537.0 57 91540.5 58 88544.0 59 79680.0 60 70816.0 61 70816.0 62 67824.5 63 64833.0 64 53805.5 65 42778.0 66 42778.0 67 35669.5 68 28561.0 69 28561.0 70 23075.5 71 17590.0 72 13671.5 73 9753.0 74 9753.0 75 7379.0 76 5005.0 77 5005.0 78 5040.0 79 5075.0 80 4002.0 81 2929.0 82 2929.0 83 2916.0 84 2903.0 85 2903.0 86 1940.5 87 978.0 88 849.5 89 721.0 90 721.0 91 519.5 92 318.0 93 272.5 94 227.0 95 227.0 96 204.5 97 182.0 98 182.0 99 340.5 100 499.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11868168706423679 2 0.05469991195747284 3 0.012345779140319244 4 0.002883685638614713 5 4.50575881033549E-4 6 4.50575881033549E-4 7 0.0 8 2.703455286201294E-4 9 1.8023035241341957E-4 10 1.8023035241341957E-4 11 0.002523224933787874 12 0.002883685638614713 13 0.013697506783419888 14 0.010273130087564917 15 0.022889254756504288 16 0.011895203259285694 17 0.020185799470302992 18 0.005587140924816008 19 0.00901151762067098 20 0.0065784078630898146 21 0.006398177510676395 22 0.007840020329983752 23 0.009642323854117948 24 0.014508543369280277 25 0.016491077245827893 26 0.017662574536515117 27 0.008831287268257559 28 0.006848753391709944 29 0.009732439030324658 30 0.0036947222244751014 31 0.005767371277229426 32 0.007569674801363622 33 0.009552208677911237 34 0.012706239845146081 35 0.016851537950654732 36 0.015409695131347373 37 0.009912669382738078 38 0.006848753391709944 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1109691.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.48802072291572 #Duplication Level Percentage of deduplicated Percentage of total 1 81.80890804476503 43.75796568817499 2 11.016111255751714 11.784599742671857 3 3.0515689144975346 4.896671440081487 4 1.2811941855715971 2.741141645917309 5 0.7030570387882744 1.8802564730049494 6 0.4471302220655361 1.4349666350209982 7 0.2876750287415018 1.0771017529153575 8 0.21492108768277016 0.9196562873414079 9 0.16050367200267907 0.7726521360765028 >10 0.8109576044447918 8.073936882929795 >50 0.09589124903601581 3.594804901155106 >100 0.10703284556623327 12.18198688771542 >500 0.011159822153876897 4.014446354669302 >1k 0.0038890289324116467 2.8698131723254927 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3165 0.2852145326942365 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2117 0.19077382802960463 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1572 0.1416610569969478 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1557 0.14030932935384716 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1478 0.13319023043351708 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1469 0.13237919384765667 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1463 0.13183850279041642 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1421 0.12805366538973462 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1370 0.12345779140319244 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1365 0.12300721552215886 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1332 0.12003341470733744 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1315 0.11850145671182337 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1258 0.11336489166804092 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1149 0.10354233746150956 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1126 0.10146968840875524 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1120 0.10092899735151498 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1119 0.10083888217530827 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1118 0.10074876699910154 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.01151762067098E-5 2 0.0 0.0 0.0 0.0 9.01151762067098E-5 3 0.0 0.0 0.0 0.0 9.01151762067098E-5 4 0.0 0.0 0.0 0.0 9.01151762067098E-5 5 0.0 0.0 0.0 0.0 9.01151762067098E-5 6 0.0 0.0 0.0 0.0 1.802303524134196E-4 7 0.0 0.0 0.0 0.0 1.802303524134196E-4 8 0.0 0.0 0.0 0.0 3.604607048268392E-4 9 0.0 0.0 0.0 0.0 3.604607048268392E-4 10 0.0 0.0 0.0 0.0 4.50575881033549E-4 11 0.0 0.0 0.0 0.0 4.50575881033549E-4 12 0.0 0.0 0.0 0.0 0.0010813821144805176 13 0.0 0.0 0.0 0.0 0.0012616124668939372 14 0.0 0.0 0.0 9.01151762067098E-5 0.001351727643100647 15 0.0 0.0 0.0 9.01151762067098E-5 0.0014418428193073568 16 0.0 0.0 0.0 9.01151762067098E-5 0.0014418428193073568 17 0.0 0.0 0.0 1.802303524134196E-4 0.0015319579955140666 18 0.0 0.0 0.0 2.703455286201294E-4 0.0017121883479274862 19 0.0 0.0 0.0 3.604607048268392E-4 0.0017121883479274862 20 0.0 0.0 0.0 5.406910572402588E-4 0.0018924187003409058 21 0.0 0.0 0.0 8.110365858603882E-4 0.0018924187003409058 22 0.0 0.0 0.0 9.912669382738078E-4 0.0018924187003409058 23 0.0 0.0 0.0 0.0014418428193073568 0.0018924187003409058 24 0.0 0.0 0.0 0.0024331097575811646 0.0018924187003409058 25 0.0 0.0 0.0 0.0029738008148214234 0.0018924187003409058 26 0.0 0.0 0.0 0.00432552845792207 0.0019825338765476156 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCCG 35 0.0020679855 22.85431 5 AACCCGT 100 6.816117E-8 17.599405 29 ACCCGTT 100 6.819573E-8 17.598612 30 TAACCCG 110 1.0633812E-8 17.453955 28 CGAATGT 85 4.9852188E-6 16.940605 23 TAACGAA 145 1.2205419E-9 15.448449 13 GATATAT 160 3.0013325E-10 15.012347 1 CAAGACG 405 0.0 15.011161 4 TCTAGCG 355 0.0 14.872738 28 ATAACGA 140 1.2778401E-8 14.85731 12 CATCGTT 260 0.0 14.768731 28 ATACGCG 65 0.0041636415 14.768065 4 CTAATCT 65 0.0041636415 14.768065 4 AAGACGG 390 0.0 14.767401 5 ACCGTCG 295 0.0 14.642253 8 CTAGCGG 365 0.0 14.465263 29 TAGCGGC 365 0.0 14.464612 30 GTATTAG 310 0.0 14.463509 1 GTAGACT 100 2.3272796E-5 14.398865 4 CTAATTG 100 2.3272796E-5 14.398865 30 >>END_MODULE