##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062882_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1109691 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.196764684943826 32.0 32.0 32.0 32.0 32.0 2 31.29126666792828 32.0 32.0 32.0 32.0 32.0 3 31.376863469199986 32.0 32.0 32.0 32.0 32.0 4 31.466574028265526 32.0 32.0 32.0 32.0 32.0 5 31.41407923466983 32.0 32.0 32.0 32.0 32.0 6 34.91664165970527 36.0 36.0 36.0 36.0 36.0 7 34.944919801998935 36.0 36.0 36.0 36.0 36.0 8 34.87796963298792 36.0 36.0 36.0 32.0 36.0 9 34.99087673956083 36.0 36.0 36.0 36.0 36.0 10 34.83896958702918 36.0 36.0 36.0 32.0 36.0 11 35.00423721558524 36.0 36.0 36.0 36.0 36.0 12 34.90231605014369 36.0 36.0 36.0 32.0 36.0 13 34.94993200809955 36.0 36.0 36.0 36.0 36.0 14 34.89971352385484 36.0 36.0 36.0 32.0 36.0 15 34.86629521191034 36.0 36.0 36.0 32.0 36.0 16 34.880260360767096 36.0 36.0 36.0 32.0 36.0 17 34.85523717863802 36.0 36.0 36.0 32.0 36.0 18 34.8412711286295 36.0 36.0 36.0 32.0 36.0 19 34.83672391683811 36.0 36.0 36.0 32.0 36.0 20 34.82259926411947 36.0 36.0 36.0 32.0 36.0 21 34.815180081662376 36.0 36.0 36.0 32.0 36.0 22 34.803694001303064 36.0 36.0 36.0 32.0 36.0 23 34.73181272985002 36.0 36.0 36.0 32.0 36.0 24 34.71243346120677 36.0 36.0 36.0 32.0 36.0 25 34.700691453747034 36.0 36.0 36.0 32.0 36.0 26 34.64046658033633 36.0 36.0 36.0 32.0 36.0 27 34.62563272118094 36.0 36.0 36.0 32.0 36.0 28 34.59161964907348 36.0 36.0 36.0 32.0 36.0 29 34.55780122574663 36.0 36.0 36.0 32.0 36.0 30 34.53318085845519 36.0 36.0 36.0 32.0 36.0 31 34.526315884331765 36.0 36.0 36.0 32.0 36.0 32 34.48474935815466 36.0 36.0 36.0 32.0 36.0 33 34.43209956645589 36.0 36.0 36.0 32.0 36.0 34 34.426561988877985 36.0 36.0 36.0 32.0 36.0 35 34.38938136832686 36.0 36.0 36.0 32.0 36.0 36 34.361767374881836 36.0 36.0 36.0 32.0 36.0 37 34.36498628897594 36.0 36.0 36.0 32.0 36.0 38 33.93125924243776 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 11.0 21 29.0 22 86.0 23 322.0 24 801.0 25 1892.0 26 3985.0 27 7777.0 28 13506.0 29 21097.0 30 31567.0 31 45557.0 32 64084.0 33 102006.0 34 246469.0 35 570498.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.774553971740055 18.77315530353894 12.022147983060973 26.430142741660035 2 15.895686276630162 20.92699679460318 36.385804696983215 26.791512231783443 3 17.58561617603459 24.72643285383048 29.26922900158693 28.418721968548 4 12.033991475096649 16.20876100532581 36.22606313474934 35.531184384828194 5 14.130986249300479 36.929536113271375 33.25976917857165 15.679708458856489 6 33.819745892768154 36.18617468497931 16.601408142281308 13.392671279971236 7 29.656721165812517 30.90888282308159 21.142562592312565 18.29183341879333 8 28.07821487823759 32.56066492379205 19.629959059568645 19.731161138401728 9 27.476158977399916 13.933232520037993 18.745054711339332 39.845553791222756 10 16.000454184580974 26.24655193699811 31.29755308057 26.455440797850915 11 37.569899236954925 21.13392445970875 22.343062976677874 18.953113326658453 12 24.695229650135893 24.06766586644174 28.28200359019832 22.955100893224042 13 29.202029395596966 19.139939983238563 25.581198352693097 26.07683226847137 14 23.79301985868138 19.88211132648638 24.917206681860087 31.407662132972153 15 25.194310848695718 26.929388451379708 22.336848726357157 25.539451973567417 16 26.021027475216073 25.695531458757436 23.330098198507514 24.953342867518977 17 24.050298686751535 25.807995198663413 25.07698088927458 25.064725225310468 18 25.159346160327516 24.33037665440199 26.26893432496073 24.24134286030976 19 25.71760967692808 24.903599290252874 25.44329908055486 23.93549195226419 20 25.807995198663413 23.994697623031996 24.947935956946573 25.249371221358018 21 27.279510493921727 23.994719245915526 24.30219250421289 24.42357775594986 22 25.768524751484872 24.084362223357672 24.95983116020586 25.187281864951593 23 24.280406492269453 23.604451337266568 25.741897054039462 26.37324511642451 24 24.784467027307603 25.04913529982671 25.06851006271115 25.09788761015454 25 24.947305150713124 24.17979419496058 25.405450706548038 25.467449947778253 26 24.700862403013453 25.11088682424821 25.768998549144357 24.419252223593976 27 25.526070818040008 24.356734184082207 24.8084823765938 25.30871262128398 28 24.550978605756015 24.27423489962521 25.949205679779325 25.22558081483945 29 24.62487305024552 24.599190225026607 25.808175429015822 24.967761295712048 30 24.694351851100894 24.59801872773592 26.085009250322837 24.62262017084035 31 25.16763675653853 24.509886085405757 24.695883809096404 25.626593348959304 32 24.666055685771983 24.6662359161244 24.791856471756553 25.875851926347064 33 24.37696620050086 24.195744581149167 25.510795347533683 25.916493870816293 34 25.241170740323206 24.31100189151755 25.67309277988197 24.774734588277276 35 26.197022414347774 24.196735848087442 25.26324895849385 24.34299277907093 36 24.671192250815768 24.906482975891485 24.96001139055827 25.462313382734475 37 25.80745450760617 24.763560306427646 24.829614730587164 24.59937045537902 38 24.627216044826895 24.417157569089053 25.580093918036646 25.375532468047414 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 386.0 1 287.0 2 188.0 3 188.0 4 502.0 5 816.0 6 816.0 7 1003.5 8 1191.0 9 1121.5 10 1052.0 11 1052.0 12 1384.5 13 1717.0 14 2325.0 15 2933.0 16 2933.0 17 4277.5 18 5622.0 19 5622.0 20 6503.5 21 7385.0 22 8166.0 23 8947.0 24 8947.0 25 10141.5 26 11336.0 27 11336.0 28 14626.0 29 17916.0 30 21176.5 31 24437.0 32 24437.0 33 31517.5 34 38598.0 35 38598.0 36 42160.0 37 45722.0 38 52359.5 39 58997.0 40 58997.0 41 62783.0 42 66569.0 43 76136.5 44 85704.0 45 85704.0 46 88035.0 47 90366.0 48 90366.0 49 96821.0 50 103276.0 51 103564.5 52 103853.0 53 103853.0 54 98959.5 55 94066.0 56 94066.0 57 91525.0 58 88984.0 59 79859.0 60 70734.0 61 70734.0 62 67984.5 63 65235.0 64 53667.5 65 42100.0 66 42100.0 67 35340.5 68 28581.0 69 28581.0 70 22987.0 71 17393.0 72 13554.5 73 9716.0 74 9716.0 75 7263.5 76 4811.0 77 4811.0 78 4809.5 79 4808.0 80 3696.5 81 2585.0 82 2585.0 83 2522.0 84 2459.0 85 2459.0 86 1560.0 87 661.0 88 539.5 89 418.0 90 418.0 91 243.5 92 69.0 93 49.5 94 30.0 95 30.0 96 21.0 97 12.0 98 12.0 99 15.0 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.005767371277229426 2 0.0 3 0.0 4 9.011517620670979E-5 5 1.8023035241341957E-4 6 1.8023035241341957E-4 7 9.01151762067098E-4 8 0.0027034552862012936 9 0.004415643634128779 10 9.01151762067098E-4 11 0.005226680219989168 12 2.703455286201294E-4 13 9.011517620670979E-5 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 9.011517620670979E-5 22 0.0 23 1.8023035241341957E-4 24 0.0 25 0.0 26 9.011517620670979E-5 27 1.8023035241341957E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1109691.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.31363834736958 #Duplication Level Percentage of deduplicated Percentage of total 1 80.37986374641739 41.245832586945056 2 11.820905876944632 12.13147378215665 3 3.285704214564543 5.058043133477789 4 1.3924731351904993 2.8581145147037263 5 0.7780483755992819 1.9962246481129966 6 0.48661134772866893 1.4981879227845012 7 0.32132422284684353 1.1541820474388764 8 0.23008206520842397 0.9445078307456778 9 0.17187456635308615 0.7937558405057917 >10 0.9004538442886987 8.48056972447754 >50 0.10216005928792196 3.72311279366523 >100 0.11218296072690512 12.15700223801757 >500 0.013736688632371477 4.680941912856535 >1k 0.004578896210790492 3.278051024112089 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3389 0.3054003321645395 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2480 0.2234856369926403 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1625 0.14643716133590343 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1518 0.13679483748178545 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1507 0.13580357054351166 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1486 0.13391115184317076 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1484 0.13373092149075733 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1471 0.1325594242000701 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1436 0.12940539303283527 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1427 0.1285943564469749 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1383 0.12462928869387965 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1366 0.12309733069836558 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1319 0.11886191741665021 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1243 0.11201316402494027 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1242 0.11192304884873355 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1217 0.10967016944356581 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1193 0.10750740521460478 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1119 0.10083888217530827 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 9.01151762067098E-5 0.0 0.0 0.0 0.0 7 9.01151762067098E-5 0.0 0.0 0.0 0.0 8 9.01151762067098E-5 0.0 0.0 0.0 0.0 9 9.01151762067098E-5 0.0 0.0 0.0 0.0 10 9.01151762067098E-5 0.0 0.0 0.0 0.0 11 9.01151762067098E-5 0.0 0.0 0.0 0.0 12 9.01151762067098E-5 0.0 0.0 0.0 4.50575881033549E-4 13 9.01151762067098E-5 0.0 0.0 0.0 4.50575881033549E-4 14 9.01151762067098E-5 0.0 0.0 9.01151762067098E-5 5.406910572402588E-4 15 9.01151762067098E-5 0.0 0.0 9.01151762067098E-5 7.209214096536784E-4 16 9.01151762067098E-5 0.0 0.0 9.01151762067098E-5 8.110365858603882E-4 17 9.01151762067098E-5 0.0 0.0 1.802303524134196E-4 8.110365858603882E-4 18 9.01151762067098E-5 0.0 0.0 1.802303524134196E-4 9.912669382738078E-4 19 9.01151762067098E-5 0.0 0.0 1.802303524134196E-4 9.912669382738078E-4 20 9.01151762067098E-5 0.0 0.0 5.406910572402588E-4 0.0010813821144805176 21 9.01151762067098E-5 0.0 0.0 8.110365858603882E-4 0.0010813821144805176 22 9.01151762067098E-5 0.0 0.0 9.912669382738078E-4 0.0010813821144805176 23 9.01151762067098E-5 0.0 0.0 0.0015319579955140666 0.0010813821144805176 24 9.01151762067098E-5 0.0 0.0 0.0024331097575811646 0.0010813821144805176 25 9.01151762067098E-5 0.0 0.0 0.0028836856386147136 0.0010813821144805176 26 9.01151762067098E-5 0.0 0.0 0.004235413281715361 0.001351727643100647 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGTGCG 60 4.7161193E-6 21.335526 9 TCTAGCG 265 0.0 19.923883 28 CCTATAC 65 9.432302E-6 19.692558 3 CTAGCGG 280 0.0 18.856533 29 TAGCGGC 295 0.0 17.897726 30 ATAGTTA 45 0.008844849 17.779606 6 GATCTAG 55 0.001364078 17.455551 1 CTAGTGG 75 3.233177E-5 17.066883 3 CTATACT 85 4.980877E-6 16.942156 4 AGCGGCG 335 0.0 16.238281 31 AAGACGG 405 0.0 15.408991 5 CCGTCGT 315 0.0 15.239662 9 ACCGTCG 305 0.0 15.214679 8 TAGAACT 190 1.8189894E-12 15.15877 4 GGTTAAC 95 1.4327428E-5 15.157403 22 CTAGAAC 85 9.430696E-5 15.059014 3 CGAAAAA 310 0.0 14.967257 24 CGACCCG 300 0.0 14.934869 5 TATATGC 75 6.2413764E-4 14.9341955 4 CGTCGTA 335 0.0 14.806825 10 >>END_MODULE