##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062879_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2447111 Sequences flagged as poor quality 0 Sequence length 38 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.317813536043115 32.0 32.0 32.0 32.0 32.0 2 31.029796768516018 32.0 32.0 32.0 32.0 32.0 3 31.05438862397333 32.0 32.0 32.0 32.0 32.0 4 31.109411465193038 32.0 32.0 32.0 32.0 32.0 5 31.09524945946465 32.0 32.0 32.0 32.0 32.0 6 34.760634887424395 36.0 36.0 36.0 32.0 36.0 7 34.68737421392001 36.0 36.0 36.0 32.0 36.0 8 34.67960954774834 36.0 36.0 36.0 32.0 36.0 9 34.77317784113593 36.0 36.0 36.0 32.0 36.0 10 34.55250415694262 36.0 36.0 36.0 32.0 36.0 11 34.751714164171545 36.0 36.0 36.0 32.0 36.0 12 34.61947700778592 36.0 36.0 36.0 32.0 36.0 13 34.66862353199344 36.0 36.0 36.0 32.0 36.0 14 34.602780176297685 36.0 36.0 36.0 32.0 36.0 15 34.577277042193835 36.0 36.0 36.0 32.0 36.0 16 34.61206336778348 36.0 36.0 36.0 32.0 36.0 17 34.596221421913434 36.0 36.0 36.0 32.0 36.0 18 34.627835026690654 36.0 36.0 36.0 32.0 36.0 19 34.52401791336805 36.0 36.0 36.0 32.0 36.0 20 34.502453301055816 36.0 36.0 36.0 32.0 36.0 21 34.449994299400394 36.0 36.0 36.0 32.0 36.0 22 34.408018271341184 36.0 36.0 36.0 32.0 36.0 23 34.425359127558984 36.0 36.0 36.0 32.0 36.0 24 34.387315082969266 36.0 36.0 36.0 32.0 36.0 25 34.35344616570315 36.0 36.0 36.0 32.0 36.0 26 34.367998836178664 36.0 36.0 36.0 32.0 36.0 27 34.28598784444188 36.0 36.0 36.0 32.0 36.0 28 34.17956561839655 36.0 36.0 36.0 32.0 36.0 29 34.106122280517724 36.0 36.0 36.0 32.0 36.0 30 34.03916414089921 36.0 36.0 36.0 32.0 36.0 31 34.03701139833869 36.0 36.0 36.0 32.0 36.0 32 34.013812614139695 36.0 36.0 36.0 32.0 36.0 33 34.077182440845554 36.0 36.0 36.0 32.0 36.0 34 34.0238084827374 36.0 36.0 36.0 32.0 36.0 35 34.0318722771464 36.0 36.0 36.0 32.0 36.0 36 33.92630943181572 36.0 36.0 36.0 32.0 36.0 37 33.82597029721986 36.0 36.0 36.0 32.0 36.0 38 33.26680032086816 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 2.0 9 6.0 10 21.0 11 23.0 12 12.0 13 12.0 14 121.0 15 371.0 16 560.0 17 681.0 18 825.0 19 1004.0 20 1392.0 21 2058.0 22 3078.0 23 4880.0 24 7776.0 25 12356.0 26 19339.0 27 28762.0 28 41592.0 29 58557.0 30 81179.0 31 109803.0 32 149666.0 33 228615.0 34 549918.0 35 1144498.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.17457153951182 21.0925266801989 13.10820890484243 25.624692875446854 2 10.60129053571706 20.504242773138998 50.95661716423952 17.937849526904422 3 18.35775603994548 27.237676426894335 31.072385346784724 23.332182186375462 4 10.0982947879202 18.055092976088943 41.563701585638405 30.282910650352445 5 9.355192123251145 41.43776656541761 37.91506766578085 11.291973645550387 6 27.862649074170935 40.456310806569725 20.164529174076787 11.516510945182551 7 25.23257016130449 32.63309265497151 24.16621068680579 17.968126496918202 8 20.554973916127867 46.38642543477888 20.482602715207268 12.575997933885985 9 26.757034636014946 15.036577900589512 22.137904937505773 36.06848252588976 10 15.238696922355818 29.512169307412574 36.78633353207206 18.462800238159552 11 32.608138641075215 19.70407839262268 31.585812730096883 16.101970236205222 12 26.6351511941716 23.03772048979752 35.98579024883819 14.341338067192687 13 30.90490430842005 24.23148587503428 26.529497904786194 18.334111911759475 14 17.257928134809656 27.458521787070673 27.939295929889692 27.344254148229975 15 17.88407301740417 43.3419441333475 22.152468383921782 16.62151446532654 16 16.00303737706633 28.13730154059427 37.89115629577318 17.96850478656623 17 16.94502233684701 33.4407736355722 32.636769760854726 16.977434266726068 18 17.381423514478627 26.5796780202257 41.10910319879231 14.929795266503366 19 24.133527208765916 25.087292985665314 28.509701127779604 22.269478677789166 20 23.92657041157023 29.62471955111832 31.12886549487734 15.319844542434113 21 19.867811920711674 27.204156327340613 27.323732880855 25.604298871092716 22 22.640767652660056 34.82410684364962 27.73978928784523 14.795336215845095 23 16.513812084700554 34.14827623270297 32.20702780971188 17.1308838728846 24 23.406924050260425 27.561534034991354 33.33067677629665 15.700865138451578 25 19.33632673346641 31.035232532096085 33.24762661461322 16.380814119824286 26 14.642930858662131 33.57956066548001 34.705833065961485 17.07167540989637 27 16.99712001883206 32.688092767516004 31.963745013570282 18.351042200081654 28 15.792220360060597 33.7447797833817 28.841627853469813 21.62137200308789 29 19.810785604698932 29.677005657060047 27.826588754376026 22.685619983864996 30 16.13206949606566 30.419465109959155 31.831290393106787 21.617175000868393 31 22.78905198321851 27.201180883226765 30.4902528911124 19.519514242442323 32 18.077934221264663 32.72671693582366 31.04606080767123 18.149288035240446 33 15.52334900204911 33.28788833608374 35.33368970057795 15.8550729612892 34 18.335551192494375 32.1297905349182 34.06055409423885 15.474104178348572 35 16.586388632875643 33.5774848214231 33.20097845878436 16.635148086916896 36 15.27360561066222 31.624263825369773 35.171307478839445 17.93082308512856 37 16.508280970625798 31.841103448275867 28.76432183908046 22.88629374201788 38 18.297924336845014 35.922160281849806 28.487680922215453 17.292234459089727 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 365.0 1 331.5 2 298.0 3 298.0 4 705.0 5 1112.0 6 1112.0 7 1407.0 8 1702.0 9 1672.0 10 1642.0 11 1642.0 12 2304.0 13 2966.0 14 4201.5 15 5437.0 16 5437.0 17 8509.5 18 11582.0 19 11582.0 20 15851.0 21 20120.0 22 27449.5 23 34779.0 24 34779.0 25 54529.5 26 74280.0 27 74280.0 28 105221.0 29 136162.0 30 192132.0 31 248102.0 32 248102.0 33 306448.0 34 364794.0 35 364794.0 36 375086.5 37 385379.0 38 375264.5 39 365150.0 40 365150.0 41 309226.5 42 253303.0 43 202716.5 44 152130.0 45 152130.0 46 128050.5 47 103971.0 48 103971.0 49 90172.5 50 76374.0 51 66070.0 52 55766.0 53 55766.0 54 47971.5 55 40177.0 56 40177.0 57 36243.5 58 32310.0 59 27098.5 60 21887.0 61 21887.0 62 21086.0 63 20285.0 64 16324.5 65 12364.0 66 12364.0 67 10545.5 68 8727.0 69 8727.0 70 7088.5 71 5450.0 72 4302.0 73 3154.0 74 3154.0 75 2373.0 76 1592.0 77 1592.0 78 1617.5 79 1643.0 80 1385.0 81 1127.0 82 1127.0 83 1119.5 84 1112.0 85 1112.0 86 774.5 87 437.0 88 354.0 89 271.0 90 271.0 91 203.5 92 136.0 93 124.5 94 113.0 95 113.0 96 109.5 97 106.0 98 106.0 99 456.0 100 806.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12545405582337704 2 0.05332818985325962 3 0.011278605670114678 4 0.003432619116991424 5 4.0864513297516947E-4 6 2.8605159308261866E-4 7 0.0 8 2.0432256648758473E-4 9 2.0432256648758473E-4 10 4.903741595702034E-4 11 0.0017980385850907459 12 0.0024110062845535 13 0.01405739257434583 14 0.009153650978643797 15 0.02333363709288218 16 0.010747366997246956 17 0.019655830896105654 18 0.005108064162189619 19 0.007314747880255534 20 0.00576189637494989 21 0.005843625401544924 22 0.006987831773875398 23 0.009480567085023931 24 0.013689611954668179 25 0.016141482752519195 26 0.01863421806366773 27 0.008990192925453729 28 0.005475844781867271 29 0.010502179917461855 30 0.0026970578776361184 31 0.005271522215379686 32 0.006129676994627542 33 0.008050309119610839 34 0.012545405582337703 35 0.01659099239879188 36 0.013934799034453278 37 0.009644025138214 38 0.005475844781867271 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2447111.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.73017884985784 #Duplication Level Percentage of deduplicated Percentage of total 1 81.34184838765822 39.63802819908606 2 11.291824596686862 11.005052642755492 3 3.025874239846144 4.423541786546407 4 1.2328335687012177 2.4030480117967534 5 0.6839499995805733 1.6664502901960772 6 0.4332588294123338 1.2667668147325843 7 0.2940967681167519 1.0031971676646145 8 0.21347852584319443 0.8322277395954292 9 0.1659685787919423 0.7278910675189264 >10 1.088671498013774 10.235015360474542 >50 0.1194025012802554 4.074070767621732 >100 0.09177498297941812 8.818067717091008 >500 0.00918272285509011 3.0383601867185104 >1k 0.006823858268461441 6.153858620330634 >5k 6.739613104653275E-4 2.1701341177705147 >10k+ 3.3698065523266377E-4 2.544289510100742 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 17379 0.7101843765975471 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 16364 0.6687068956005674 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAG 14747 0.6026289775984824 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 13486 0.5510988263303136 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 8933 0.3650426972867189 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAA 7456 0.30468581114628634 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 6931 0.28323194166508997 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCA 6846 0.27975845803480104 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTA 6128 0.2504177374871839 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCAT 6062 0.24772067960954774 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5444 0.22246641039168225 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 5062 0.20685616631203077 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAG 3958 0.1617417436315721 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTT 3943 0.16112877593210934 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACG 3640 0.1487468284029617 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTT 3608 0.14743916397744117 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCA 3601 0.14715311238435855 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATG 3544 0.14482383512640007 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3511 0.14347530618758203 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAA 3459 0.14135035149611114 No Hit TTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGT 3357 0.1371821711397644 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTC 3252 0.1328913972435251 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAAT 3126 0.12774246856803798 No Hit CACTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAA 2990 0.12218489475957568 No Hit ACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTT 2964 0.12112241741384024 No Hit CCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 2912 0.11899746272236937 No Hit GAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTT 2751 0.11241827608146912 No Hit GACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAA 2726 0.11139666324903119 No Hit ATACACACTTTAGGACGTGAAATATGGCGAGGAAAACT 2664 0.10886306342458515 No Hit CCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGT 2647 0.10816836669852736 No Hit ACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAA 2627 0.10735107643257702 No Hit AGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCT 2524 0.10314203156293276 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAA 2517 0.10285597996985017 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 4.086451329751695E-5 0.0 15 0.0 0.0 0.0 8.17290265950339E-5 0.0 16 0.0 0.0 0.0 8.17290265950339E-5 0.0 17 0.0 0.0 0.0 8.17290265950339E-5 0.0 18 0.0 0.0 0.0 1.2259353989255086E-4 0.0 19 0.0 0.0 0.0 2.0432256648758476E-4 0.0 20 0.0 0.0 0.0 3.6778061967765257E-4 0.0 21 0.0 0.0 0.0 5.312386728677204E-4 0.0 22 0.0 0.0 0.0 6.946967260577882E-4 0.0 23 0.0 0.0 0.0 0.0011850708856279916 0.0 24 0.0 0.0 0.0 0.0018389030983882628 0.0 25 0.0 0.0 0.0 0.002370141771255983 0.0 26 0.0 0.0 0.0 0.0027787869042311527 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGCG 30 8.4226707E-4 26.664997 8 TCTTCGC 45 1.2386319E-5 24.889366 29 TAGGACC 4260 0.0 22.380373 4 CACGGTT 115 1.8189894E-12 20.869112 28 GAACGGA 55 5.8377147E-5 20.363194 26 CGCGTTT 40 0.0044854647 19.999567 28 TTCGCGT 40 0.0044854647 19.999567 26 TCGCGTT 40 0.0044854647 19.999567 27 ACCGTCG 165 0.0 19.392727 8 AGGACCT 8130 0.0 18.830074 5 TACCGTC 170 0.0 18.821966 7 CGACAAC 60 1.1390391E-4 18.666262 19 GACGTGC 60 1.13957474E-4 18.665117 7 CTACGTC 60 1.1406468E-4 18.662828 4 ATACCGT 180 0.0 18.662828 6 AGCGGCG 155 0.0 18.581001 31 GGACCTG 8190 0.0 18.301487 6 CTAGCGG 160 0.0 18.000345 29 GACGTTA 80 2.80102E-6 17.998507 7 GTCCTAG 620 0.0 17.82282 1 >>END_MODULE