##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062878_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1122165 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.146506975355674 32.0 32.0 32.0 32.0 32.0 2 30.741112046802385 32.0 32.0 32.0 32.0 32.0 3 30.79816069829303 32.0 32.0 32.0 32.0 32.0 4 30.85470853216773 32.0 32.0 32.0 32.0 32.0 5 30.776618411730894 32.0 32.0 32.0 32.0 32.0 6 34.40538067040052 36.0 36.0 36.0 32.0 36.0 7 34.319690063404224 36.0 36.0 36.0 32.0 36.0 8 34.29886603128774 36.0 36.0 36.0 32.0 36.0 9 34.436945547223445 36.0 36.0 36.0 32.0 36.0 10 34.150420838290266 36.0 36.0 36.0 32.0 36.0 11 34.44754202813312 36.0 36.0 36.0 32.0 36.0 12 34.23838472951839 36.0 36.0 36.0 32.0 36.0 13 34.34224289654374 36.0 36.0 36.0 32.0 36.0 14 34.22316682484305 36.0 36.0 36.0 32.0 36.0 15 34.16752973047635 36.0 36.0 36.0 32.0 36.0 16 34.17964381352118 36.0 36.0 36.0 32.0 36.0 17 34.09426866815486 36.0 36.0 36.0 32.0 36.0 18 34.12741619993495 36.0 36.0 36.0 32.0 36.0 19 34.11918122557734 36.0 36.0 36.0 32.0 36.0 20 34.101172287497825 36.0 36.0 36.0 32.0 36.0 21 34.0758872358343 36.0 36.0 36.0 32.0 36.0 22 34.062416846007494 36.0 36.0 36.0 32.0 36.0 23 34.014483609807826 36.0 36.0 36.0 32.0 36.0 24 33.98419661992666 36.0 36.0 36.0 32.0 36.0 25 33.96586776454443 36.0 36.0 36.0 32.0 36.0 26 33.91913043090811 36.0 36.0 36.0 32.0 36.0 27 33.927433131491355 36.0 36.0 36.0 32.0 36.0 28 33.90599154313314 36.0 36.0 36.0 32.0 36.0 29 33.87501570624641 36.0 36.0 36.0 32.0 36.0 30 33.84716240481569 36.0 36.0 36.0 32.0 36.0 31 33.8683250680604 36.0 36.0 36.0 32.0 36.0 32 33.8133884054484 36.0 36.0 36.0 32.0 36.0 33 33.75895612499053 36.0 36.0 36.0 32.0 36.0 34 33.76677493951424 36.0 36.0 36.0 32.0 36.0 35 33.71354034388882 36.0 36.0 36.0 27.0 36.0 36 33.66032000641617 36.0 36.0 36.0 27.0 36.0 37 33.66447447567871 36.0 36.0 36.0 27.0 36.0 38 33.04800274469441 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 1.0 9 2.0 10 11.0 11 11.0 12 6.0 13 3.0 14 168.0 15 333.0 16 409.0 17 486.0 18 682.0 19 846.0 20 1132.0 21 1754.0 22 2601.0 23 3972.0 24 5864.0 25 8678.0 26 12854.0 27 18064.0 28 24614.0 29 32672.0 30 43150.0 31 57441.0 32 76346.0 33 112397.0 34 239234.0 35 478431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.66340983366687 17.30085838709591 11.330424161531303 25.70530761770592 2 16.899243467832896 20.02532176021898 36.92536767819966 26.15006709374847 3 18.514025979813283 24.47039950090239 28.599184510149062 28.416390009135267 4 12.509735983303122 15.263348322737375 35.91744599091368 36.30946970304583 5 14.84856910143099 36.24369743406032 33.19627647345036 15.71145699105833 6 33.95671554273106 35.54214290679209 16.85636069074052 13.644780859736331 7 30.172479091755665 30.555488720464457 21.151256722496246 18.120775465283625 8 28.609480084444062 31.843056668238034 19.846403775565584 19.701059471752323 9 28.06951568576429 13.874353481309326 18.71607002185064 39.340060811075745 10 16.328109196257586 26.016184814505554 30.805150410412747 26.85055557882411 11 37.67753928633172 21.091996941574447 22.15050447980922 19.079959292284602 12 25.288756562244068 23.750890041251573 28.12975932571633 22.83059407078802 13 29.635690170871616 18.885626891690997 25.380120711721442 26.098562225715945 14 24.166234432900385 19.8451444551983 24.811822351030855 31.176798760870454 15 25.59519034503659 26.52619194052999 22.602258648198163 25.27635906623526 16 26.084774961610545 25.389085898794445 23.52117056859168 25.00496857100333 17 24.118647950293287 25.508917135571302 25.203642615788173 25.16879229834724 18 25.494919356707324 24.010473201188486 26.263120464984468 24.231486977119726 19 25.80883486605643 24.756233306626907 25.52400592829191 23.910925899024754 20 26.079761162106763 23.478656091257463 25.10801176365743 25.333570982978344 21 27.80285962798457 23.67997975232242 24.09580573636668 24.421354883326323 22 26.202326897455208 23.640155245322365 24.944857610095404 25.212660247127026 23 24.407839740196312 23.448815501239665 25.66844729154301 26.47489746702101 24 24.863637335919172 24.960784593336232 25.07985682811531 25.09572124262929 25 25.06276877827046 23.97477662158248 25.253058223222443 25.70939637692462 26 24.82637589084855 25.089664195999156 25.770791219682625 24.313168693469667 27 25.63651935380664 24.435445276134747 24.6384612848115 25.289574085247118 28 24.571627179516888 24.19777291584046 25.930513904794157 25.3000859998485 29 24.428566717793462 24.641659395729413 25.84107439349689 25.088699492980243 30 24.53855696121312 24.799667062342042 26.043905708062866 24.61787026838197 31 25.22450987469154 24.723311686633497 24.46487023119816 25.5873082074768 32 24.59682594002652 24.690668178123797 24.49549771142576 26.217008170423924 33 24.409265666023217 24.122030732266385 25.322303797062233 26.146399804648162 34 25.376501057892664 24.35202960316993 25.42783603465824 24.843633304279162 35 26.406449140381994 24.175542107467848 25.26145043270559 24.156558319444567 36 24.718716577540107 25.25035650623886 24.656238859180036 25.374688057041002 37 25.778453119917295 25.074572328697535 24.780115233965947 24.366859317419223 38 24.701721052594056 24.679441477795287 25.324568845668495 25.294268623942166 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 623.0 1 461.0 2 299.0 3 299.0 4 750.0 5 1201.0 6 1201.0 7 1390.0 8 1579.0 9 1482.5 10 1386.0 11 1386.0 12 1796.5 13 2207.0 14 2701.5 15 3196.0 16 3196.0 17 4722.0 18 6248.0 19 6248.0 20 7106.5 21 7965.0 22 7973.0 23 7981.0 24 7981.0 25 9074.5 26 10168.0 27 10168.0 28 12940.5 29 15713.0 30 19224.5 31 22736.0 32 22736.0 33 29772.5 34 36809.0 35 36809.0 36 40650.0 37 44491.0 38 51342.0 39 58193.0 40 58193.0 41 62158.5 42 66124.0 43 76245.0 44 86366.0 45 86366.0 46 89526.0 47 92686.0 48 92686.0 49 98426.0 50 104166.0 51 104656.5 52 105147.0 53 105147.0 54 99889.5 55 94632.0 56 94632.0 57 92859.5 58 91087.0 59 81614.0 60 72141.0 61 72141.0 62 69582.0 63 67023.0 64 55404.5 65 43786.0 66 43786.0 67 36533.5 68 29281.0 69 29281.0 70 23640.5 71 18000.0 72 14195.0 73 10390.0 74 10390.0 75 7785.5 76 5181.0 77 5181.0 78 5307.5 79 5434.0 80 4293.5 81 3153.0 82 3153.0 83 3242.0 84 3331.0 85 3331.0 86 2244.0 87 1157.0 88 987.5 89 818.0 90 818.0 91 594.0 92 370.0 93 335.5 94 301.0 95 301.0 96 272.0 97 243.0 98 243.0 99 398.0 100 553.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11959025633485271 2 0.053468072876983325 3 0.01247588367129611 4 0.0034754247370039166 5 2.6734036438491663E-4 6 6.237941835648055E-4 7 0.0 8 1.7822690958994446E-4 9 8.911345479497223E-5 10 1.7822690958994446E-4 11 0.0016931556411044723 12 0.0023169498246692777 13 0.01363435858363075 14 0.007752870567162584 15 0.022723930972717916 16 0.009980706937036888 17 0.019961413874073776 18 0.00561414765208325 19 0.007841984021957555 20 0.005792374561673194 21 0.005435920742493305 22 0.006237941835648055 23 0.007752870567162584 24 0.013990812402810639 25 0.016931556411044723 26 0.017911804413789416 27 0.007663757112367611 28 0.006237941835648055 29 0.010515387665806722 30 0.0029407440082340835 31 0.0048121265589285 32 0.006148828380853083 33 0.007752870567162584 34 0.010960954939781583 35 0.013812585493220694 36 0.014703720041170416 37 0.00891134547949722 38 0.005435920742493305 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1122165.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.249742797110954 #Duplication Level Percentage of deduplicated Percentage of total 1 79.22728673244546 40.6037806755079 2 12.591179969600052 12.90589469908276 3 3.7667788978642784 5.79139349067388 4 1.528528451890474 3.1334676006981184 5 0.7852101641407842 2.0120909476946234 6 0.4521346286603983 1.390307005710761 7 0.2954282718681943 1.0598436063767949 8 0.20485520882912578 0.8399021410512918 9 0.16140333432405227 0.7444691433633409 >10 0.7714968704491896 7.236789367724753 >50 0.08998435610427873 3.261045092538415 >100 0.10548742635985438 11.695092261338102 >500 0.01429746872455781 4.841098614509933 >1k 0.005928218739450799 4.484825353729309 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4018 0.3580578613661984 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2804 0.2498741272451021 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1743 0.15532475170763657 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1731 0.1542553902500969 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1719 0.15318602879255724 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1714 0.15274046151858237 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1703 0.15176021351583768 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1644 0.14650251968293432 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1622 0.14454202367744495 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1621 0.14445291022264994 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1620 0.144363796767855 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1552 0.13830408184179688 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1481 0.13197702655135385 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1413 0.12591731162529574 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1406 0.12529351744173092 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1401 0.12484795016775609 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1335 0.11896646215128791 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1288 0.11477812977592422 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1285 0.1145107894115393 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1252 0.11157004540330522 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1247 0.11112447812933036 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1219 0.10862930139507114 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1187 0.10577767084163203 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1182 0.10533210356765715 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1177 0.10488653629368229 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 1165 0.10381717483614263 No Hit CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCC 1161 0.10346072101696274 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1146 0.10212401919503816 No Hit CTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGT 1137 0.10132199810188341 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 8.911345479497222E-5 0.0 6 0.0 0.0 0.0 8.911345479497222E-5 0.0 7 0.0 0.0 0.0 8.911345479497222E-5 0.0 8 0.0 0.0 0.0 8.911345479497222E-5 0.0 9 0.0 0.0 0.0 8.911345479497222E-5 0.0 10 0.0 0.0 0.0 8.911345479497222E-5 0.0 11 0.0 0.0 0.0 8.911345479497222E-5 0.0 12 0.0 0.0 0.0 8.911345479497222E-5 0.0 13 0.0 0.0 0.0 8.911345479497222E-5 0.0 14 0.0 0.0 0.0 8.911345479497222E-5 0.0 15 0.0 0.0 0.0 2.6734036438491663E-4 0.0 16 0.0 0.0 0.0 2.6734036438491663E-4 0.0 17 0.0 0.0 0.0 2.6734036438491663E-4 0.0 18 0.0 0.0 0.0 2.6734036438491663E-4 0.0 19 0.0 0.0 0.0 2.6734036438491663E-4 0.0 20 0.0 0.0 0.0 2.6734036438491663E-4 0.0 21 0.0 0.0 0.0 3.5645381917988886E-4 0.0 22 0.0 0.0 0.0 9.802480027446944E-4 0.0 23 0.0 0.0 0.0 0.002138722915079333 0.0 24 0.0 0.0 0.0 0.0034754247370039166 0.0 25 0.0 0.0 0.0 0.004099218920568722 0.0 26 0.0 0.0 0.0 0.005703261106878222 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACC 85 1.0581061E-8 20.703114 4 ATAGGCG 40 0.004488042 19.996437 5 CTAAGAC 65 9.433485E-6 19.692308 3 TACTAGA 60 1.1354314E-4 18.672491 2 ACACCGT 80 2.8008253E-6 17.996792 6 ATACTAG 45 0.008800272 17.795225 1 GTACCTA 55 0.0013662492 17.451435 6 TTAATAC 75 3.2335796E-5 17.066668 3 ATCGTTT 400 0.0 16.39927 29 GTCTAGG 130 4.7384674E-9 16.015703 1 ATAGATC 80 5.620667E-5 16.0 3 TACCGTC 270 0.0 15.997861 7 ATACCGT 280 0.0 15.425821 6 GTATTAG 365 0.0 15.357523 1 CGCTTCG 365 0.0 15.341783 32 GATATAC 115 3.307523E-7 15.319367 1 ACGCTTC 380 0.0 15.157219 31 GTCCTAC 85 9.353312E-5 15.073603 1 GTCTAGA 85 9.353312E-5 15.073603 1 CCGTGTG 85 9.435454E-5 15.058151 9 >>END_MODULE