##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062877_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2618384 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.246173594094678 32.0 32.0 32.0 32.0 32.0 2 30.863880546168936 32.0 32.0 32.0 32.0 32.0 3 30.916390032936345 32.0 32.0 32.0 32.0 32.0 4 30.977891325336543 32.0 32.0 32.0 32.0 32.0 5 30.900823179487805 32.0 32.0 32.0 32.0 32.0 6 34.57288121222861 36.0 36.0 36.0 32.0 36.0 7 34.48813428435248 36.0 36.0 36.0 32.0 36.0 8 34.47111233493636 36.0 36.0 36.0 32.0 36.0 9 34.605566257661216 36.0 36.0 36.0 32.0 36.0 10 34.32173966843671 36.0 36.0 36.0 32.0 36.0 11 34.59987763444934 36.0 36.0 36.0 32.0 36.0 12 34.40380287994427 36.0 36.0 36.0 32.0 36.0 13 34.49872440405991 36.0 36.0 36.0 32.0 36.0 14 34.39524340203729 36.0 36.0 36.0 32.0 36.0 15 34.33935816900806 36.0 36.0 36.0 32.0 36.0 16 34.360040391325334 36.0 36.0 36.0 32.0 36.0 17 34.280426782320696 36.0 36.0 36.0 32.0 36.0 18 34.32173890460681 36.0 36.0 36.0 32.0 36.0 19 34.28942317093291 36.0 36.0 36.0 32.0 36.0 20 34.26871536031384 36.0 36.0 36.0 32.0 36.0 21 34.24695881123624 36.0 36.0 36.0 32.0 36.0 22 34.21800049190646 36.0 36.0 36.0 32.0 36.0 23 34.17089166447702 36.0 36.0 36.0 32.0 36.0 24 34.15189979773784 36.0 36.0 36.0 32.0 36.0 25 34.11506257294575 36.0 36.0 36.0 32.0 36.0 26 34.077575328905155 36.0 36.0 36.0 32.0 36.0 27 34.07036095545955 36.0 36.0 36.0 32.0 36.0 28 34.04192700535903 36.0 36.0 36.0 32.0 36.0 29 33.995697728064336 36.0 36.0 36.0 32.0 36.0 30 33.95887959901985 36.0 36.0 36.0 32.0 36.0 31 33.97638314319061 36.0 36.0 36.0 32.0 36.0 32 33.93608080403791 36.0 36.0 36.0 32.0 36.0 33 33.904753466260104 36.0 36.0 36.0 32.0 36.0 34 33.90674171550086 36.0 36.0 36.0 32.0 36.0 35 33.86966197471418 36.0 36.0 36.0 32.0 36.0 36 33.807914347169856 36.0 36.0 36.0 32.0 36.0 37 33.797231040214115 36.0 36.0 36.0 32.0 36.0 38 33.18136491820909 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 3.0 7 4.0 8 11.0 9 10.0 10 28.0 11 25.0 12 13.0 13 16.0 14 237.0 15 522.0 16 771.0 17 946.0 18 1196.0 19 1682.0 20 2268.0 21 3331.0 22 5137.0 23 7696.0 24 11619.0 25 17552.0 26 25619.0 27 36701.0 28 51692.0 29 69822.0 30 93853.0 31 125738.0 32 169743.0 33 252908.0 34 560729.0 35 1178511.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.288954643782134 17.525225622433418 11.484307095066 25.70151263871846 2 15.874403065293393 19.65019062551229 39.239737232179465 25.23566907701485 3 19.085129642092944 24.132695505898656 28.62202231122811 28.16015254078029 4 12.00969327543339 15.443396694814593 36.75890173432481 35.788008295427204 5 13.8942887543357 37.254399479372346 34.13689696445662 14.714414801835336 6 33.79067788583458 36.21863322914662 17.104609880322766 12.886079004696041 7 29.784779220441944 30.56843140856888 21.205775630055363 18.441013740933805 8 27.502436632283928 34.519441117520536 19.51467478979273 18.463447460402815 9 27.434131906902635 14.136008680186238 18.87772463629187 39.552134776619255 10 15.835900773268225 26.662572511798384 31.96469402493997 25.53683268999342 11 37.71294657912456 20.734776217278174 23.048930975231837 18.50334622836543 12 25.225594765460503 23.515783708595762 29.465176081741557 21.793445444202174 13 29.83658631520686 19.601582455326806 25.45515453462375 25.106676694842584 14 22.903479622627096 20.95435621252053 25.002520912111837 31.13964325274054 15 24.352454720345705 29.281416126631754 22.364283280335805 24.00184587268674 16 24.77427856610836 25.73843127518573 25.807681289509365 23.67960886919654 17 23.143599530599644 26.717505638305024 26.214871373301634 23.924023457793698 18 24.36074695250041 24.517227787513004 28.4111065108555 22.710918749131086 19 25.441979401603792 25.02355657492939 25.538802940227217 23.995661083239597 20 25.4196666499886 24.72888909938053 25.94552230169555 23.905921948935323 21 26.45053853792682 24.5608815216561 24.296615995722252 24.691963944694827 22 25.35134286594945 25.67022984383361 25.328693449506122 23.64973384071082 23 23.133658506774022 25.18465751750322 26.46150437914663 25.22017959657613 24 24.629598788680703 25.520708395658932 26.17063895259384 23.679053863066528 25 24.249377553101844 25.30851134537915 26.205682888611992 24.236428212907015 26 23.093989427149207 26.657809481644577 26.994270460689496 23.25393063051672 27 24.36163089732048 25.72490075882781 25.855872751294157 24.05759559255755 28 23.218939919395496 25.796534739685345 26.187335193123868 24.79719014779529 29 23.59260614514684 25.463605577552283 26.02764788970179 24.91614038759909 30 23.263792743248523 25.877303373704635 26.86191960444246 23.99698427860438 31 24.794859376885835 25.323389621282377 25.212091953109844 24.669659048721947 32 23.69447678238046 26.099922694508866 25.32522542342326 24.880375099687416 33 23.09039123561336 25.637351082313746 26.617970537110107 24.65428714496278 34 24.217860130404393 25.91720428875367 26.63351171309506 23.231423867746877 35 24.782401426490146 25.703829108436015 26.588815284346882 22.92495418072695 36 23.116983720875155 26.381326791838205 26.314251510912722 24.187437976373914 37 24.46885226866465 26.195903600468124 25.325617316959143 24.00962681390808 38 23.644632325784002 26.4244036267651 25.70998177756406 24.220982269886843 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 175.0 1 259.5 2 344.0 3 344.0 4 881.5 5 1419.0 6 1419.0 7 1763.5 8 2108.0 9 2152.0 10 2196.0 11 2196.0 12 2896.5 13 3597.0 14 4671.0 15 5745.0 16 5745.0 17 8496.0 18 11247.0 19 11247.0 20 13671.0 21 16095.0 22 18363.0 23 20631.0 24 20631.0 25 26973.5 26 33316.0 27 33316.0 28 43771.5 29 54227.0 30 69269.0 31 84311.0 32 84311.0 33 106440.5 34 128570.0 35 128570.0 36 138123.0 37 147676.0 38 162227.0 39 176778.0 40 176778.0 41 175839.0 42 174900.0 43 189045.5 44 203191.0 45 203191.0 46 206312.5 47 209434.0 48 209434.0 49 217706.0 50 225978.0 51 225324.5 52 224671.0 53 224671.0 54 209893.0 55 195115.0 56 195115.0 57 188919.5 58 182724.0 59 163150.5 60 143577.0 61 143577.0 62 137968.5 63 132360.0 64 109231.5 65 86103.0 66 86103.0 67 72289.0 68 58475.0 69 58475.0 70 46963.0 71 35451.0 72 27377.5 73 19304.0 74 19304.0 75 14584.5 76 9865.0 77 9865.0 78 9951.0 79 10037.0 80 8064.0 81 6091.0 82 6091.0 83 6153.0 84 6215.0 85 6215.0 86 4120.5 87 2026.0 88 1743.0 89 1460.0 90 1460.0 91 1076.5 92 693.0 93 626.5 94 560.0 95 560.0 96 505.5 97 451.0 98 451.0 99 859.5 100 1268.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.125459061772452 2 0.05625607244773876 3 0.012603193420063672 4 0.0028261706457112477 5 2.2914897127388495E-4 6 3.055319616985133E-4 7 1.1457448563694248E-4 8 6.110639233970266E-4 9 2.6734046648619914E-4 10 6.492554186093407E-4 11 0.002406064198375792 12 0.0031698941026220753 13 0.016307768455658147 14 0.010846384640297222 15 0.02490085487842883 16 0.012755959400912929 17 0.021998301242292954 18 0.006568937176518036 19 0.0083639374514968 20 0.006683511662154979 21 0.007027235119065805 22 0.008211171470647543 23 0.011228299592420363 24 0.015734896027473435 25 0.018713832654033938 26 0.020890747881135846 27 0.01019712922168788 28 0.006416171195668779 29 0.012144895477515903 30 0.004010106997292987 31 0.006874469138216549 32 0.007638299042462833 33 0.009280533336592341 34 0.014283619209405496 35 0.018713832654033938 36 0.016422342941295087 37 0.010693618659447965 38 0.006989043623853492 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2618384.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.02160078753727 #Duplication Level Percentage of deduplicated Percentage of total 1 73.616426307323 33.14329356613452 2 14.570277960171863 13.11954475372621 3 5.332476266022228 7.202298529736102 4 2.35885436337453 4.247975978551538 5 1.2436614287534709 2.799581418009849 6 0.7317912619873597 1.97678484342018 7 0.44548779563016466 1.4039601583406884 8 0.2993324959450641 1.0781142508140635 9 0.21539712903017091 0.8727771198580209 >10 0.9851614806471237 7.8106857394564635 >50 0.08063913420923782 2.561686361810391 >100 0.09197848060315295 9.017436140454368 >500 0.01745002609566851 5.5095141173850415 >1k 0.010980748128493497 9.009544826231679 >5k 8.512207851545347E-5 0.2468021960710528 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 6440 0.2459532291673032 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4414 0.16857725986715472 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 4136 0.15796002419813138 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 4124 0.1575017262555836 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 3828 0.14619704367273859 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3696 0.14115576630471313 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 3602 0.1375657657547556 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3562 0.13603810594626306 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3516 0.1342812971664966 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3448 0.13168427549205924 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3423 0.13072948811175136 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 3082 0.11770618824435224 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3072 0.1173242732922291 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 3056 0.11671320936883207 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 3051 0.11652225189277052 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2936 0.11213022994335438 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 2911 0.11117544256304653 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2832 0.1081583144412737 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 2746 0.10487384585301468 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2733 0.10437735641525461 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 2710 0.10349895202537136 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 2691 0.1027733136163374 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 2648 0.1011310793222079 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5276598084925665E-4 2 0.0 0.0 0.0 0.0 1.909574760615708E-4 3 0.0 0.0 0.0 0.0 1.909574760615708E-4 4 0.0 0.0 0.0 0.0 1.909574760615708E-4 5 0.0 0.0 0.0 3.819149521231416E-5 1.909574760615708E-4 6 0.0 0.0 0.0 3.819149521231416E-5 1.909574760615708E-4 7 0.0 0.0 0.0 1.5276598084925665E-4 1.909574760615708E-4 8 0.0 0.0 0.0 1.5276598084925665E-4 1.909574760615708E-4 9 0.0 0.0 0.0 1.5276598084925665E-4 1.909574760615708E-4 10 0.0 0.0 0.0 1.5276598084925665E-4 1.909574760615708E-4 11 0.0 0.0 0.0 1.5276598084925665E-4 1.909574760615708E-4 12 0.0 0.0 0.0 2.2914897127388495E-4 6.110639233970266E-4 13 0.0 0.0 0.0 2.2914897127388495E-4 6.874469138216549E-4 14 0.0 0.0 0.0 2.2914897127388495E-4 6.874469138216549E-4 15 0.0 0.0 0.0 2.2914897127388495E-4 9.165958850955398E-4 16 0.0 0.0 0.0 2.6734046648619914E-4 9.165958850955398E-4 17 0.0 0.0 0.0 2.6734046648619914E-4 9.165958850955398E-4 18 0.0 0.0 0.0 3.055319616985133E-4 0.0010693618659447966 19 0.0 0.0 0.0 3.819149521231416E-4 0.0011075533611571106 20 0.0 0.0 0.0 4.964894377600841E-4 0.0013367023324309957 21 0.0 0.0 0.0 5.346809329723983E-4 0.001451276818067938 22 0.0 0.0 0.0 8.402128946709115E-4 0.0014894683132802523 23 0.0 0.0 0.0 0.0014894683132802523 0.0014894683132802523 24 0.0 0.0 0.0 0.002367872703163478 0.0015276598084925663 25 0.0 0.0 0.0 0.0027497876552866197 0.0015276598084925663 26 0.0 0.0 0.0 0.003131702607409761 0.0016040427989171947 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGGC 745 0.0 17.824812 30 CTAGCGG 730 0.0 17.752737 29 TCTAGCG 735 0.0 17.631294 28 CGAATGT 330 0.0 16.969362 23 GTCCTAC 2710 0.0 16.72861 1 TGTAGGA 2740 0.0 16.708698 2 AGGACCT 1800 0.0 16.528904 5 GATATAC 805 0.0 16.51676 1 GTAGGAC 2775 0.0 16.37414 3 AGCGGCG 840 0.0 15.808909 31 TCCTACA 2930 0.0 15.679833 2 CTGTAGG 2800 0.0 15.675999 1 TAGGACC 2335 0.0 15.619537 4 ATCGTTT 640 0.0 15.499399 29 TAGGACG 2420 0.0 15.46752 4 GGACCTG 1860 0.0 15.308018 6 ATTTAGA 895 0.0 15.213829 1 CGGTCCA 895 0.0 15.195231 10 CCTACAG 2980 0.0 15.194041 3 TCTAGAT 580 0.0 15.179654 2 >>END_MODULE