##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062877_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2618384 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.224459055661814 32.0 32.0 32.0 32.0 32.0 2 31.32721060012588 32.0 32.0 32.0 32.0 32.0 3 31.413796066581526 32.0 32.0 32.0 32.0 32.0 4 31.505836424298344 32.0 32.0 32.0 32.0 32.0 5 31.441189680352462 32.0 32.0 32.0 32.0 32.0 6 34.976330438927214 36.0 36.0 36.0 36.0 36.0 7 34.999414906293346 36.0 36.0 36.0 36.0 36.0 8 34.94159603786152 36.0 36.0 36.0 36.0 36.0 9 35.04299483956517 36.0 36.0 36.0 36.0 36.0 10 34.89568718721166 36.0 36.0 36.0 32.0 36.0 11 35.071956214214566 36.0 36.0 36.0 36.0 36.0 12 34.96381508594614 36.0 36.0 36.0 36.0 36.0 13 35.014335941557846 36.0 36.0 36.0 36.0 36.0 14 34.95903465649042 36.0 36.0 36.0 32.0 36.0 15 34.93390274306595 36.0 36.0 36.0 36.0 36.0 16 34.94350141155766 36.0 36.0 36.0 36.0 36.0 17 34.91289054623004 36.0 36.0 36.0 32.0 36.0 18 34.91581868816797 36.0 36.0 36.0 32.0 36.0 19 34.90398047039701 36.0 36.0 36.0 32.0 36.0 20 34.88890896064137 36.0 36.0 36.0 32.0 36.0 21 34.87068703444567 36.0 36.0 36.0 32.0 36.0 22 34.85561285128537 36.0 36.0 36.0 32.0 36.0 23 34.79839473507324 36.0 36.0 36.0 32.0 36.0 24 34.776036669946045 36.0 36.0 36.0 32.0 36.0 25 34.750948676741075 36.0 36.0 36.0 32.0 36.0 26 34.68035475316073 36.0 36.0 36.0 32.0 36.0 27 34.660657107590026 36.0 36.0 36.0 32.0 36.0 28 34.624908722326445 36.0 36.0 36.0 32.0 36.0 29 34.58673212179726 36.0 36.0 36.0 32.0 36.0 30 34.55140307915111 36.0 36.0 36.0 32.0 36.0 31 34.55643251715562 36.0 36.0 36.0 32.0 36.0 32 34.526251306149135 36.0 36.0 36.0 32.0 36.0 33 34.49575998020153 36.0 36.0 36.0 32.0 36.0 34 34.48004570758147 36.0 36.0 36.0 32.0 36.0 35 34.44143716124144 36.0 36.0 36.0 32.0 36.0 36 34.40229087864881 36.0 36.0 36.0 32.0 36.0 37 34.386120981490876 36.0 36.0 36.0 32.0 36.0 38 33.94848692934268 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 12.0 21 50.0 22 179.0 23 564.0 24 1612.0 25 3935.0 26 8466.0 27 16644.0 28 28774.0 29 46038.0 30 70914.0 31 102516.0 32 148596.0 33 237531.0 34 585175.0 35 1367378.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.79792417597066 18.61973820355741 12.130591897075062 26.45174572339687 2 14.962058644590956 20.696322883245116 38.422988539109824 25.918629933054106 3 18.215548215998876 24.742512939278576 29.01346784887167 28.028470995850874 4 11.567071407866159 16.256113987994873 36.88198929032864 35.29482531381033 5 13.379827695118587 37.76064760604068 33.859994454590655 14.999530244250076 6 33.893756404248585 36.51304872212923 16.70247126179976 12.89072361182243 7 29.541364571016537 30.77655768308295 21.180647851950983 18.50142989394953 8 27.32880445264822 34.712048663506614 19.340512781732624 18.618634102112548 9 27.18947673161785 13.94109249070189 18.792838335483605 40.07659244219665 10 15.68591580709816 26.946250488854123 31.857744977023856 25.510088727023856 11 37.71681063737066 20.722042012175347 23.020837272046386 18.5403100784076 12 25.0031890020295 23.687105050691766 29.410046082034118 21.899659865244615 13 29.79132135136993 19.563623309068966 25.468839511453645 25.176215828107456 14 22.8265220074672 20.923401609542374 25.014169044723765 31.235907338266657 15 24.344366601690204 29.368648754346193 22.24459819491717 24.042386449046436 16 24.80229210165205 25.849656066358513 25.59743933565105 23.750612496338388 17 23.116242690147818 26.914654229478945 25.966512169338035 24.002590911035206 18 24.408375547666044 24.55377056993932 28.37891615591907 22.658937726475568 19 25.464103049820043 25.002253298217525 25.607779454808764 23.925864197153665 20 25.485108372186815 24.717039211971965 25.86675598384347 23.93109643199775 21 26.416820164827044 24.53966783290896 24.383960928527973 24.659551073736022 22 25.32161107249521 25.652426309397413 25.40429578594398 23.6216668321634 23 23.114800241217576 25.161750591872924 26.447124045641914 25.27632512126759 24 24.581421212473035 25.50882529071366 26.12886421548558 23.78088928132772 25 24.260735363367946 25.348774948164493 26.142242967882034 24.248246720585524 26 23.1455238943454 26.668273257406007 26.91785496457544 23.268347883673155 27 24.453842105544567 25.656836932120676 25.800093340085596 24.089227622249158 28 23.282757609273506 25.66048371820176 26.276970833918938 24.779787838605795 29 23.607232552597328 25.294036321639606 26.191116352681654 24.907614773081413 30 23.288944631497902 25.674423613954257 26.900981674192938 24.135650080354907 31 24.7072239977024 25.177514069746838 25.333640902174775 24.781621030375987 32 23.75262757487061 25.931948866170888 25.421099426210976 24.894324132747528 33 23.144237056138444 25.447986238840446 26.706357814590987 24.701418890430126 34 24.21757083758532 25.751952349235253 26.76521090871316 23.26526590446627 35 24.83680774095778 25.603005517907228 26.555081302055004 23.00510543907998 36 23.185101956015618 26.239657743096505 26.372373188959298 24.202867111928576 37 24.591589542095253 25.977826773241347 25.35049303329574 24.08009065136766 38 23.749808564764688 26.06872419920875 25.839651173493216 24.341816062533347 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 84.0 1 131.5 2 179.0 3 179.0 4 693.5 5 1208.0 6 1208.0 7 1668.5 8 2129.0 9 2273.0 10 2417.0 11 2417.0 12 3023.0 13 3629.0 14 4682.5 15 5736.0 16 5736.0 17 8914.0 18 12092.0 19 12092.0 20 14275.0 21 16458.0 22 18519.0 23 20580.0 24 20580.0 25 26560.0 26 32540.0 27 32540.0 28 43058.0 29 53576.0 30 68256.5 31 82937.0 32 82937.0 33 105905.5 34 128874.0 35 128874.0 36 138372.0 37 147870.0 38 162626.5 39 177383.0 40 177383.0 41 176616.5 42 175850.0 43 189447.0 44 203044.0 45 203044.0 46 206862.0 47 210680.0 48 210680.0 49 219143.0 50 227606.0 51 225285.5 52 222965.0 53 222965.0 54 209307.0 55 195649.0 56 195649.0 57 190016.5 58 184384.0 59 164143.5 60 143903.0 61 143903.0 62 138430.5 63 132958.0 64 109744.0 65 86530.0 66 86530.0 67 72581.5 68 58633.0 69 58633.0 70 47106.5 71 35580.0 72 27611.0 73 19642.0 74 19642.0 75 14504.0 76 9366.0 77 9366.0 78 9731.5 79 10097.0 80 7916.0 81 5735.0 82 5735.0 83 5554.5 84 5374.0 85 5374.0 86 3368.0 87 1362.0 88 1189.5 89 1017.0 90 1017.0 91 603.5 92 190.0 93 131.5 94 73.0 95 73.0 96 49.0 97 25.0 98 25.0 99 27.0 100 29.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009280533336592341 2 3.819149521231416E-5 3 0.0 4 1.1457448563694248E-4 5 7.638299042462833E-5 6 1.9095747606157081E-4 7 3.055319616985133E-4 8 0.0029407451313481904 9 0.004201064473354558 10 6.110639233970266E-4 11 0.005461383815360925 12 3.8191495212314163E-4 13 1.5276598084925665E-4 14 0.0 15 0.0 16 3.819149521231416E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.1457448563694248E-4 22 1.5276598084925665E-4 23 3.819149521231416E-5 24 0.0 25 1.9095747606157081E-4 26 1.1457448563694248E-4 27 7.638299042462833E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 3.819149521231416E-5 38 1.9095747606157081E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2618384.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.61549328931076 #Duplication Level Percentage of deduplicated Percentage of total 1 71.21229595460153 30.34747120369734 2 15.995551847040959 13.63316664792793 3 5.65680731334323 7.232029023021074 4 2.6243196599746392 4.473467074346222 5 1.317407906417586 2.807099389761179 6 0.7964951397594051 2.0365819970031342 7 0.5072781192627954 1.513253510108049 8 0.3456658728418789 1.1784577347549472 9 0.24197781354405806 0.9280803500324009 >10 1.0860226962220392 8.152518898094119 >50 0.08577366869474246 2.580110860113939 >100 0.09758769876996341 8.993367062136167 >500 0.019834033230772895 5.795752443716542 >1k 0.012801966903498607 9.84005833581178 >5k 1.8030939300702265E-4 0.4885854694751986 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 7322 0.2796381279445643 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 5395 0.20604311667043487 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 4305 0.16441438688901247 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 4135 0.15792183270291904 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 3852 0.14711363955783413 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3845 0.14684629909134794 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3804 0.14528044778764307 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3732 0.14253066013235643 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 3676 0.14039193640046685 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3553 0.13569438248935223 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3395 0.12966012624580658 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3219 0.12293842308843927 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3214 0.12274746561237772 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 3207 0.1224801251458915 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 3199 0.122174593184193 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 3123 0.11927203954805712 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 3069 0.11720969880659214 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 3038 0.11602576245501042 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2969 0.11339054928536074 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2965 0.11323778330451148 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 2941 0.11232118741941594 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 2771 0.10582863323332255 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 2677 0.10223863268336501 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 2652 0.10128384530305715 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 2635 0.1006345898844478 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.909574760615708E-4 2 0.0 0.0 0.0 0.0 1.909574760615708E-4 3 0.0 0.0 0.0 3.819149521231416E-5 1.909574760615708E-4 4 0.0 0.0 0.0 3.819149521231416E-5 1.909574760615708E-4 5 0.0 0.0 0.0 7.638299042462833E-5 2.2914897127388495E-4 6 0.0 0.0 0.0 7.638299042462833E-5 3.055319616985133E-4 7 0.0 0.0 0.0 1.5276598084925665E-4 3.055319616985133E-4 8 0.0 0.0 0.0 1.5276598084925665E-4 3.4372345691082747E-4 9 0.0 0.0 0.0 1.5276598084925665E-4 3.4372345691082747E-4 10 0.0 0.0 0.0 1.5276598084925665E-4 3.4372345691082747E-4 11 0.0 0.0 0.0 1.909574760615708E-4 3.4372345691082747E-4 12 0.0 0.0 0.0 2.6734046648619914E-4 6.874469138216549E-4 13 0.0 0.0 0.0 2.6734046648619914E-4 9.165958850955398E-4 14 0.0 0.0 0.0 2.6734046648619914E-4 9.165958850955398E-4 15 0.0 0.0 0.0 2.6734046648619914E-4 0.0011075533611571106 16 0.0 0.0 0.0 3.4372345691082747E-4 0.0011075533611571106 17 0.0 0.0 0.0 3.4372345691082747E-4 0.0011457448563694248 18 0.0 0.0 0.0 3.4372345691082747E-4 0.0012221278467940532 19 0.0 0.0 0.0 3.4372345691082747E-4 0.0012985108372186814 20 0.0 0.0 0.0 4.2010644733545574E-4 0.001451276818067938 21 0.0 0.0 0.0 4.582979425477699E-4 0.0015276598084925663 22 0.0 0.0 0.0 7.25638409033969E-4 0.0015276598084925663 23 0.0 0.0 0.0 0.0013367023324309957 0.0015276598084925663 24 0.0 0.0 0.0 0.0022532982175265353 0.0015276598084925663 25 0.0 0.0 0.0 0.0025206386840127344 0.0015276598084925663 26 0.0 0.0 0.0 0.0028261706457112477 0.0015276598084925663 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 840 0.0 18.475607 28 CTAGCGG 840 0.0 18.475607 29 TAGCGGC 875 0.0 17.736584 30 ATCGTTT 680 0.0 16.705355 29 AAGACGG 925 0.0 16.6071 5 GTCCTAC 2440 0.0 16.459753 1 TCCTACA 2605 0.0 16.276499 2 CAAGACG 935 0.0 16.257101 4 GCGCAAG 910 0.0 16.176548 1 TGTAGGA 2685 0.0 15.851129 2 CGCAAGA 925 0.0 15.740644 2 CATCGTT 715 0.0 15.663839 28 GTAGGAC 2730 0.0 15.590144 3 AGCGGCG 1020 0.0 15.52892 31 GTATTAG 720 0.0 15.334019 1 TAGGACA 930 0.0 15.312222 4 GATATAC 850 0.0 15.247742 1 CGCTTCG 655 0.0 15.14456 32 TAAACGC 645 0.0 15.131305 28 TAGGACG 2815 0.0 15.062554 4 >>END_MODULE