##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062875_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2291494 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.194213905862288 32.0 32.0 32.0 32.0 32.0 2 30.781719262629533 32.0 32.0 32.0 32.0 32.0 3 30.834767623218738 32.0 32.0 32.0 32.0 32.0 4 30.904835884361905 32.0 32.0 32.0 32.0 32.0 5 30.819161647379396 32.0 32.0 32.0 32.0 32.0 6 34.462720391150924 36.0 36.0 36.0 32.0 36.0 7 34.37989364144091 36.0 36.0 36.0 32.0 36.0 8 34.36314561591695 36.0 36.0 36.0 32.0 36.0 9 34.49857080140729 36.0 36.0 36.0 32.0 36.0 10 34.21232697969098 36.0 36.0 36.0 32.0 36.0 11 34.508817391623104 36.0 36.0 36.0 32.0 36.0 12 34.307382868992896 36.0 36.0 36.0 32.0 36.0 13 34.40617343968607 36.0 36.0 36.0 32.0 36.0 14 34.297977651261576 36.0 36.0 36.0 32.0 36.0 15 34.238363268679734 36.0 36.0 36.0 32.0 36.0 16 34.252337994339065 36.0 36.0 36.0 32.0 36.0 17 34.177940243352154 36.0 36.0 36.0 32.0 36.0 18 34.20073017865201 36.0 36.0 36.0 32.0 36.0 19 34.202333063058425 36.0 36.0 36.0 32.0 36.0 20 34.17499325767381 36.0 36.0 36.0 32.0 36.0 21 34.16110362933527 36.0 36.0 36.0 32.0 36.0 22 34.1306427160621 36.0 36.0 36.0 32.0 36.0 23 34.078869942491664 36.0 36.0 36.0 32.0 36.0 24 34.062358007483326 36.0 36.0 36.0 32.0 36.0 25 34.04329489843744 36.0 36.0 36.0 32.0 36.0 26 33.99297183409601 36.0 36.0 36.0 32.0 36.0 27 33.99775866748942 36.0 36.0 36.0 32.0 36.0 28 33.982269645916595 36.0 36.0 36.0 32.0 36.0 29 33.9429935230029 36.0 36.0 36.0 32.0 36.0 30 33.91630394842841 36.0 36.0 36.0 32.0 36.0 31 33.93323613328248 36.0 36.0 36.0 32.0 36.0 32 33.88489256354151 36.0 36.0 36.0 32.0 36.0 33 33.84023479878193 36.0 36.0 36.0 32.0 36.0 34 33.847173939796484 36.0 36.0 36.0 32.0 36.0 35 33.79693815475842 36.0 36.0 36.0 32.0 36.0 36 33.75120816375692 36.0 36.0 36.0 32.0 36.0 37 33.7616118567188 36.0 36.0 36.0 32.0 36.0 38 33.14989914876495 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 7.0 10 29.0 11 23.0 12 14.0 13 15.0 14 232.0 15 532.0 16 797.0 17 913.0 18 1190.0 19 1594.0 20 2130.0 21 3061.0 22 4823.0 23 7319.0 24 11080.0 25 16747.0 26 24213.0 27 34352.0 28 47657.0 29 64001.0 30 85665.0 31 113736.0 32 153789.0 33 227994.0 34 495999.0 35 993576.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.281751801855336 17.499842709039687 11.486521912378448 25.73188357672653 2 16.52682003294841 20.20568087197582 37.5836754725582 25.683823622517572 3 18.570341189707833 24.702756350552413 28.602952665350916 28.123949794388835 4 12.418112968426987 15.746050809563855 36.508381924039206 35.32745429796994 5 14.481158094652907 36.58836528927928 33.596859333324026 15.33361728274379 6 33.2676118171301 36.07351907298623 17.251810723778927 13.407058386104742 7 29.694950106786226 30.828315500717 21.474199801526865 18.00253459096991 8 27.944169004668147 32.429684305431365 20.01089249033488 19.61525419956561 9 27.72301726429014 14.373729267337932 18.861196608499352 39.04205685987258 10 15.895355286763573 26.281100438274365 31.59843368083694 26.225110594125123 11 36.89023631854366 21.504721264915833 22.702744692095497 18.90229772444501 12 25.118572348771156 23.916352597594166 28.662214130227966 22.302860923406715 13 29.28128109778453 19.58270046613942 25.409792419560397 25.726226016515653 14 23.82785410308346 20.136700346398907 25.344380390251946 30.691065160265683 15 25.11870559179943 26.97696426217458 22.877245454093085 25.02708469193291 16 25.70144546626205 25.868604371532705 23.824857620329315 24.605092541875926 17 23.9019938115414 25.70541138758441 25.495462975532064 24.897131825342125 18 24.883715449588497 24.55334425551266 26.608584763123417 23.954355531775423 19 25.421821830384438 25.09755332209377 25.820370957936305 23.66025388958548 20 25.696041938613455 24.151056866500912 25.384522392704035 24.768378802181598 21 27.03150217296998 24.2610636424022 24.58541618114164 24.12201800348618 22 25.75996487618725 24.328346549133403 25.099429456257365 24.812259118421977 23 24.040824609986185 24.116590616973593 25.881772732529846 25.960812040510373 24 24.572881604491684 25.296224458442158 25.497781044428 24.633112892638167 25 24.755228029009494 24.498584093662814 25.591372224491867 25.154815652835826 26 24.39491524535984 25.394005632268396 26.0494595571354 24.16161956523637 27 25.210645899289748 25.002509507761143 24.89401148525326 24.892833107695854 28 24.14681450356427 24.739564467122932 26.115563112465377 24.99805791684742 29 24.19661616430536 25.110092936332457 26.025708282742226 24.667582616619953 30 24.32700058173509 25.039615155835616 26.24794832551504 24.385435936914256 31 24.921313106626634 25.030942322463517 24.915246840304448 25.1324977306054 32 24.319404505400556 25.120682709978748 24.89993842028613 25.659974364334566 33 24.120840969070517 24.659266820843456 25.57476970587555 25.645122504210477 34 24.935230899225562 24.827471526036827 25.84466065181109 24.392636922926517 35 25.72625608104982 24.653424897888993 25.668206224515895 23.95211279654529 36 24.440447441275406 25.36321105326077 25.19844742468993 24.997894080773897 37 25.3960903778254 25.2343023737927 24.99587564974883 24.37373159863307 38 24.285410659475566 25.09881724799038 25.715222154964472 24.900549937569583 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 906.0 1 710.5 2 515.0 3 515.0 4 1179.5 5 1844.0 6 1844.0 7 2174.0 8 2504.0 9 2392.0 10 2280.0 11 2280.0 12 3056.5 13 3833.0 14 4873.0 15 5913.0 16 5913.0 17 8816.5 18 11720.0 19 11720.0 20 14158.5 21 16597.0 22 17721.5 23 18846.0 24 18846.0 25 22273.0 26 25700.0 27 25700.0 28 32265.0 29 38830.0 30 47011.5 31 55193.0 32 55193.0 33 69906.0 34 84619.0 35 84619.0 36 92864.5 37 101110.0 38 114442.5 39 127775.0 40 127775.0 41 136226.0 42 144677.0 43 161964.5 44 179252.0 45 179252.0 46 185079.0 47 190906.0 48 190906.0 49 201901.0 50 212896.0 51 212046.0 52 211196.0 53 211196.0 54 200205.0 55 189214.0 56 189214.0 57 183707.5 58 178201.0 59 159016.0 60 139831.0 61 139831.0 62 133137.0 63 126443.0 64 103781.0 65 81119.0 66 81119.0 67 67504.5 68 53890.0 69 53890.0 70 43310.0 71 32730.0 72 25517.5 73 18305.0 74 18305.0 75 13627.0 76 8949.0 77 8949.0 78 9040.5 79 9132.0 80 7143.5 81 5155.0 82 5155.0 83 5380.5 84 5606.0 85 5606.0 86 3736.5 87 1867.0 88 1607.5 89 1348.0 90 1348.0 91 983.5 92 619.0 93 554.5 94 490.0 95 490.0 96 429.5 97 369.0 98 369.0 99 741.5 100 1114.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11965992492234324 2 0.054418645652137866 3 0.012044543865268684 4 0.003272973876431708 5 2.6183791011453664E-4 6 3.054775618002927E-4 7 0.0 8 3.054775618002927E-4 9 4.3639651685756106E-5 10 3.054775618002927E-4 11 0.002312901539345074 12 0.0028802170112599028 13 0.01457564366304254 14 0.008946128595580001 15 0.023216294696822248 16 0.011389949089982344 17 0.019856041517019026 18 0.0057604340225198055 19 0.007986056258493367 20 0.006327749494434635 21 0.006982344269720977 22 0.007462380438264294 23 0.009993480236038148 24 0.014226526449556489 25 0.01667034694395883 26 0.017892257191160003 27 0.00907704755063727 28 0.006109551236005855 29 0.010822633618067514 30 0.003185694573060196 31 0.0058477133258913174 32 0.006764146011292197 33 0.00807333556186488 34 0.012131823168640197 35 0.015710274606872198 36 0.014532004011356781 37 0.009775281977609367 38 0.0062404701910631225 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2291494.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.62614290821245 #Duplication Level Percentage of deduplicated Percentage of total 1 77.54937502238968 38.48476367303672 2 13.235360632366108 13.136397963670591 3 4.174988072780598 6.215656642196773 4 1.6911332968401946 3.3569769066331183 5 0.9060979520459969 2.248307322853664 6 0.5512902386537627 1.6415044900400504 7 0.34452330194089914 1.1968153832129802 8 0.25665834848764685 1.0189571104507005 9 0.1752345633264409 0.7826593933886544 >10 0.9282251544717737 8.213751444315374 >50 0.07861936932600469 2.7532448953224073 >100 0.08552747810314329 9.262513489339861 >500 0.015281601859001596 5.122308518883354 >1k 0.007596634450139507 6.246795755846621 >5k 8.83329587225524E-5 0.3193470108091945 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 7285 0.3179148625307332 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4674 0.20397173197922402 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2969 0.12956612585500987 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2942 0.12838785525949448 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2777 0.12118731273134471 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2730 0.11913624910211415 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2660 0.11608147348411124 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2654 0.1158196355739967 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2636 0.11503412184365308 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2613 0.11403040985488071 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2606 0.11372493229308042 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2544 0.11101927388856353 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2465 0.1075717414053888 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2435 0.10626255185481612 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2388 0.10421148822558558 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.4911721348604885E-4 2 0.0 0.0 0.0 0.0 3.4911721348604885E-4 3 0.0 0.0 0.0 0.0 3.4911721348604885E-4 4 0.0 0.0 0.0 0.0 3.4911721348604885E-4 5 0.0 0.0 0.0 0.0 3.4911721348604885E-4 6 0.0 0.0 0.0 0.0 5.673154719148294E-4 7 0.0 0.0 0.0 0.0 5.673154719148294E-4 8 0.0 0.0 0.0 4.3639651685756106E-5 6.109551236005854E-4 9 0.0 0.0 0.0 4.3639651685756106E-5 6.109551236005854E-4 10 0.0 0.0 0.0 4.3639651685756106E-5 6.109551236005854E-4 11 0.0 0.0 0.0 4.3639651685756106E-5 6.109551236005854E-4 12 0.0 0.0 0.0 4.3639651685756106E-5 0.0010473516404581466 13 0.0 0.0 0.0 4.3639651685756106E-5 0.001178270595515415 14 0.0 0.0 0.0 4.3639651685756106E-5 0.001178270595515415 15 0.0 0.0 0.0 4.3639651685756106E-5 0.0013964688539441954 16 0.0 0.0 0.0 8.727930337151221E-5 0.0013964688539441954 17 0.0 0.0 0.0 8.727930337151221E-5 0.0013964688539441954 18 0.0 0.0 0.0 1.7455860674302443E-4 0.0015273878090014638 19 0.0 0.0 0.0 2.1819825842878053E-4 0.0015273878090014638 20 0.0 0.0 0.0 3.9275686517180493E-4 0.001701946415744488 21 0.0 0.0 0.0 6.545947752863416E-4 0.001701946415744488 22 0.0 0.0 0.0 8.291533820293659E-4 0.0017455860674302443 23 0.0 0.0 0.0 0.001701946415744488 0.0017455860674302443 24 0.0 0.0 0.0 0.002923856662945659 0.0017892257191160002 25 0.0 0.0 0.0 0.0035784514382320005 0.0017892257191160002 26 0.0 0.0 0.0 0.0044948841236328784 0.0017892257191160002 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGAC 40 0.0044848504 19.999973 22 CGTATAC 50 7.205337E-4 19.197458 3 TATGCGA 55 0.0013650195 17.454903 12 ACGTTTT 195 0.0 16.409876 29 ACGATTA 130 4.809408E-9 15.999979 32 CACGTTT 225 0.0 15.643741 28 CGAGCCG 840 0.0 15.428886 15 ATACCGT 595 0.0 15.055188 6 AGGCCCG 925 0.0 15.048958 10 GTATTAG 650 0.0 15.026187 1 GTATTAC 195 1.8189894E-12 14.779857 1 ATGCGAA 65 0.0041626897 14.769533 13 ACCGTCG 580 0.0 14.620351 8 TACGCTA 740 0.0 14.486782 9 TACCGTC 575 0.0 14.468914 7 CTAGCGG 580 0.0 14.344496 29 ATCGTTT 560 0.0 14.285383 29 GGCATCG 595 0.0 14.251459 26 ATACGCT 755 0.0 14.198345 8 CGTTTTT 240 0.0 13.999981 30 >>END_MODULE