##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062875_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2291494 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.193724705366893 32.0 32.0 32.0 32.0 32.0 2 31.291975889965236 32.0 32.0 32.0 32.0 32.0 3 31.374145426520865 32.0 32.0 32.0 32.0 32.0 4 31.475625072550923 32.0 32.0 32.0 32.0 32.0 5 31.39896809679624 32.0 32.0 32.0 32.0 32.0 6 34.92246324886733 36.0 36.0 36.0 36.0 36.0 7 34.949973248893514 36.0 36.0 36.0 36.0 36.0 8 34.893470373476866 36.0 36.0 36.0 32.0 36.0 9 34.99486666777221 36.0 36.0 36.0 36.0 36.0 10 34.84840981473222 36.0 36.0 36.0 32.0 36.0 11 35.022645488052774 36.0 36.0 36.0 36.0 36.0 12 34.915961813559186 36.0 36.0 36.0 32.0 36.0 13 34.96374941413767 36.0 36.0 36.0 36.0 36.0 14 34.91875867883573 36.0 36.0 36.0 32.0 36.0 15 34.88773917802098 36.0 36.0 36.0 32.0 36.0 16 34.89565061047509 36.0 36.0 36.0 32.0 36.0 17 34.86146854410267 36.0 36.0 36.0 32.0 36.0 18 34.85938387794164 36.0 36.0 36.0 32.0 36.0 19 34.851722064295174 36.0 36.0 36.0 32.0 36.0 20 34.832408463648605 36.0 36.0 36.0 32.0 36.0 21 34.82141258061335 36.0 36.0 36.0 32.0 36.0 22 34.807585356976716 36.0 36.0 36.0 32.0 36.0 23 34.75202073407131 36.0 36.0 36.0 32.0 36.0 24 34.72226983793106 36.0 36.0 36.0 32.0 36.0 25 34.7071164052797 36.0 36.0 36.0 32.0 36.0 26 34.64177737318972 36.0 36.0 36.0 32.0 36.0 27 34.62307647325282 36.0 36.0 36.0 32.0 36.0 28 34.59414294778865 36.0 36.0 36.0 32.0 36.0 29 34.551823831962906 36.0 36.0 36.0 32.0 36.0 30 34.53380851095399 36.0 36.0 36.0 32.0 36.0 31 34.5220869005112 36.0 36.0 36.0 32.0 36.0 32 34.49895221196302 36.0 36.0 36.0 32.0 36.0 33 34.450224613287226 36.0 36.0 36.0 32.0 36.0 34 34.45001208818352 36.0 36.0 36.0 32.0 36.0 35 34.40463426917112 36.0 36.0 36.0 32.0 36.0 36 34.3763260999156 36.0 36.0 36.0 32.0 36.0 37 34.36877513098442 36.0 36.0 36.0 32.0 36.0 38 33.933970152223836 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 9.0 20 20.0 21 43.0 22 169.0 23 534.0 24 1568.0 25 3620.0 26 7988.0 27 15436.0 28 26691.0 29 42511.0 30 64468.0 31 93047.0 32 133833.0 33 213652.0 34 516573.0 35 1171330.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.75362160713686 18.782822280810553 12.093568895093956 26.36998721695863 2 15.640719827640757 21.21049464257582 36.85466200420425 26.294123525579177 3 17.500460398325284 25.531727335965094 29.002432474184964 27.965379791524658 4 11.947574630610879 16.598661305371273 36.65647531776323 34.797288746254615 5 13.950037791971345 37.15897764425972 33.372667240383116 15.51831732338581 6 33.274521501085104 36.482042898744005 16.9955867123953 13.24784888777559 7 29.453427956230943 30.971703028869523 21.473395819823153 18.101473195076373 8 27.763407852801542 32.66487361424294 19.851691318591783 19.72002721436374 9 27.56661642086373 14.153430956244256 18.74140809862259 39.53854452426942 10 15.679624975507064 26.559419972358437 31.64893210798101 26.112022944153484 11 36.96508786622565 21.396048932936075 22.70674322602832 18.932119974809954 12 24.936995060412738 24.113250478837543 28.566646897844063 22.38310756290566 13 29.25501343884833 19.575638743508048 25.4110969669966 25.758250850647023 14 23.686075547219414 20.164879331999124 25.372093490098603 30.776951630682863 15 25.091359610804133 27.13386986830426 22.74254263812168 25.03222788276993 16 25.61936693675259 25.880201248705536 23.736882460474458 24.76354935406741 17 23.84344013119825 25.930200995507736 25.380952339390806 24.84540653390321 18 24.904538261937407 24.484768452372123 26.586584996513192 24.024108289177278 19 25.41486034875064 25.047894517725116 25.856188146248694 23.68105698727555 20 25.688742802730445 24.090178721829513 25.430526983705825 24.790551491734213 21 27.004807348225523 24.325199477021958 24.601831470500443 24.068161704252077 22 25.67770197085395 24.3733127819667 25.130940774883108 24.81804447229624 23 24.00093389017626 24.03248541342096 25.89315249030107 26.073428206101706 24 24.518981939293756 25.305106624760963 25.500699543616523 24.67521189232876 25 24.722538852415806 24.492426768236587 25.669127363307396 25.115907016040207 26 24.494238256787927 25.269933065502244 26.045889712126673 24.189938965583153 27 25.2983098791923 24.881332825367565 24.930427454938766 24.889929840501367 28 24.18841157777415 24.637201755710468 26.19282441935262 24.981562247162767 29 24.3154029641797 24.9394936229377 26.016869343755644 24.72823406912695 30 24.360700922629515 24.91296071471276 26.362931781623693 24.363406581034035 31 24.893671988667656 24.828779826610937 25.028300314118212 25.2492478706032 32 24.381691595090366 25.00621865036522 24.987540879443717 25.6245488751007 33 24.04186962741338 24.528189905799447 25.773491006304184 25.65644946048299 34 24.889046185588963 24.601242682721402 26.00067903298023 24.5090320987094 35 25.807093538102215 24.495372887731758 25.649248917954836 24.048284656211187 36 24.534081258777025 25.19552745937803 25.27329331868205 24.997097963162897 37 25.49812480416706 25.135130181444943 25.02424182651144 24.342503187876556 38 24.412555482386374 24.89721766551327 25.70935193779776 24.980874914302596 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 673.0 1 500.5 2 328.0 3 328.0 4 1070.0 5 1812.0 6 1812.0 7 2160.5 8 2509.0 9 2476.0 10 2443.0 11 2443.0 12 3069.5 13 3696.0 14 4780.0 15 5864.0 16 5864.0 17 9068.5 18 12273.0 19 12273.0 20 14482.5 21 16692.0 22 17950.5 23 19209.0 24 19209.0 25 22028.0 26 24847.0 27 24847.0 28 32072.5 29 39298.0 30 47164.5 31 55031.0 32 55031.0 33 70351.5 34 85672.0 35 85672.0 36 93724.5 37 101777.0 38 115172.5 39 128568.0 40 128568.0 41 136489.0 42 144410.0 43 162251.5 44 180093.0 45 180093.0 46 185843.0 47 191593.0 48 191593.0 49 202592.5 50 213592.0 51 212024.0 52 210456.0 53 210456.0 54 199981.5 55 189507.0 56 189507.0 57 184276.5 58 179046.0 59 159802.0 60 140558.0 61 140558.0 62 133293.0 63 126028.0 64 103947.5 65 81867.0 66 81867.0 67 67829.5 68 53792.0 69 53792.0 70 43079.0 71 32366.0 72 25306.5 73 18247.0 74 18247.0 75 13415.0 76 8583.0 77 8583.0 78 8746.5 79 8910.0 80 6832.5 81 4755.0 82 4755.0 83 4643.5 84 4532.0 85 4532.0 86 2884.0 87 1236.0 88 1081.0 89 926.0 90 926.0 91 550.5 92 175.0 93 120.5 94 66.0 95 66.0 96 46.5 97 27.0 98 27.0 99 32.0 100 37.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007724218348378831 2 4.3639651685756106E-5 3 0.0 4 3.4911721348604885E-4 5 8.727930337151221E-5 6 2.1819825842878053E-4 7 5.236758202290733E-4 8 0.002487460146088098 9 0.0040148479550895615 10 7.418740786578538E-4 11 0.00493128064049044 12 3.054775618002927E-4 13 1.3091895505726832E-4 14 0.0 15 0.0 16 4.3639651685756106E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 8.727930337151221E-5 22 0.0 23 1.7455860674302443E-4 24 0.0 25 8.727930337151221E-5 26 0.0 27 4.3639651685756106E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 4.3639651685756106E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2291494.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.40300375316264 #Duplication Level Percentage of deduplicated Percentage of total 1 75.83914482759627 35.950032668991916 2 14.233616920708242 13.494323926268242 3 4.425955758667559 6.294107923183503 4 1.8718778195007562 3.54930525213025 5 0.9876452165565597 2.3408674953611865 6 0.5695109710892975 1.6197918420007962 7 0.3787058551362987 1.2566256550659445 8 0.2743452374140973 1.0403830655042199 9 0.1934132782720903 0.8251533320259049 >10 1.025728712035686 8.746010613414857 >50 0.08274032845965304 2.773319203902104 >100 0.09200867046172194 9.562617782531442 >500 0.01625520847406917 5.199870100872397 >1k 0.008866477349492268 6.770951506697147 >5k 1.8471827811442223E-4 0.5766396320500994 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 7721 0.33694175066572285 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 5450 0.23783610168737077 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3096 0.1351083616191009 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 3087 0.1347156047539291 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2946 0.12856241386623748 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2854 0.12454756591114792 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2825 0.12328201601226099 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2809 0.12258378158528889 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2786 0.1215800695965165 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2748 0.11992176283245777 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2667 0.11638695104591154 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2608 0.11381221159645191 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2550 0.11128111179867807 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2487 0.10853181374247543 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2464 0.10752810175370305 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2460 0.10735354314696001 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2343 0.10224770389972657 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1819825842878053E-4 2 0.0 0.0 0.0 0.0 2.1819825842878053E-4 3 0.0 0.0 0.0 0.0 2.1819825842878053E-4 4 0.0 0.0 0.0 0.0 2.1819825842878053E-4 5 0.0 0.0 0.0 0.0 2.1819825842878053E-4 6 0.0 0.0 0.0 0.0 2.6183791011453664E-4 7 0.0 0.0 0.0 0.0 2.6183791011453664E-4 8 0.0 0.0 0.0 0.0 2.6183791011453664E-4 9 0.0 0.0 0.0 0.0 2.6183791011453664E-4 10 0.0 0.0 0.0 0.0 3.4911721348604885E-4 11 0.0 0.0 0.0 0.0 3.4911721348604885E-4 12 4.3639651685756106E-5 0.0 0.0 0.0 7.418740786578538E-4 13 4.3639651685756106E-5 0.0 0.0 0.0 8.291533820293659E-4 14 4.3639651685756106E-5 0.0 0.0 0.0 9.164326854008782E-4 15 4.3639651685756106E-5 0.0 0.0 0.0 9.600723370866343E-4 16 4.3639651685756106E-5 0.0 0.0 4.3639651685756106E-5 0.001178270595515415 17 4.3639651685756106E-5 0.0 0.0 4.3639651685756106E-5 0.001178270595515415 18 4.3639651685756106E-5 0.0 0.0 1.3091895505726832E-4 0.0012219102472011709 19 4.3639651685756106E-5 0.0 0.0 2.1819825842878053E-4 0.0012219102472011709 20 4.3639651685756106E-5 0.0 0.0 3.9275686517180493E-4 0.0013528292022584392 21 4.3639651685756106E-5 0.0 0.0 6.545947752863416E-4 0.0014401085056299514 22 4.3639651685756106E-5 0.0 0.0 8.291533820293659E-4 0.0014837481573157076 23 4.3639651685756106E-5 0.0 0.0 0.001701946415744488 0.0015273878090014638 24 4.3639651685756106E-5 0.0 0.0 0.002923856662945659 0.001614667112372976 25 4.3639651685756106E-5 0.0 0.0 0.0035348117865462445 0.001614667112372976 26 4.3639651685756106E-5 0.0 0.0 0.0043203255168898546 0.0017455860674302443 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAG 560 0.0 17.144423 1 ATCGTTT 520 0.0 15.691344 29 GCGTAAC 280 0.0 15.429308 11 GTCTAAA 75 6.2433793E-4 14.934698 1 CGCGTAA 280 0.0 14.8585005 10 CATCGTT 555 0.0 14.7018 28 TCTAGCG 665 0.0 14.675791 28 TCGCGTA 285 0.0 14.598144 9 CTAGCGG 680 0.0 14.58734 29 TATGCCG 90 1.5331915E-4 14.224453 5 CCTATAC 135 1.319313E-7 14.223211 3 TAGCGGC 700 0.0 14.170559 30 ATTAGAG 725 0.0 14.12512 3 CGTTTAT 610 0.0 13.900785 31 CGAACGA 320 0.0 13.499466 16 TAACGAA 320 0.0 13.499466 13 TAAGACT 275 0.0 13.383333 4 TATACTG 325 0.0 13.294393 5 ACCGTCG 495 0.0 13.254604 8 TACACCG 145 3.1495256E-7 13.243456 5 >>END_MODULE