##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062874_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1784932 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.160165765418515 32.0 32.0 32.0 32.0 32.0 2 31.270919564442792 32.0 32.0 32.0 32.0 32.0 3 31.357764329397423 32.0 32.0 32.0 32.0 32.0 4 31.464492204745056 32.0 32.0 32.0 32.0 32.0 5 31.382907023909034 32.0 32.0 32.0 32.0 32.0 6 34.8993849625644 36.0 36.0 36.0 36.0 36.0 7 34.924473313269075 36.0 36.0 36.0 36.0 36.0 8 34.864057006093226 36.0 36.0 36.0 32.0 36.0 9 34.97652963810386 36.0 36.0 36.0 36.0 36.0 10 34.82167780061089 36.0 36.0 36.0 32.0 36.0 11 35.006930235997785 36.0 36.0 36.0 36.0 36.0 12 34.89436068152737 36.0 36.0 36.0 32.0 36.0 13 34.94572734423496 36.0 36.0 36.0 36.0 36.0 14 34.894549484238055 36.0 36.0 36.0 32.0 36.0 15 34.85833297851123 36.0 36.0 36.0 32.0 36.0 16 34.869637050599124 36.0 36.0 36.0 32.0 36.0 17 34.834868779314846 36.0 36.0 36.0 32.0 36.0 18 34.83322557946185 36.0 36.0 36.0 32.0 36.0 19 34.82280277343899 36.0 36.0 36.0 32.0 36.0 20 34.80542339988302 36.0 36.0 36.0 32.0 36.0 21 34.79112089424135 36.0 36.0 36.0 32.0 36.0 22 34.77670073705889 36.0 36.0 36.0 32.0 36.0 23 34.72134960883664 36.0 36.0 36.0 32.0 36.0 24 34.69758399759767 36.0 36.0 36.0 32.0 36.0 25 34.67766727247873 36.0 36.0 36.0 32.0 36.0 26 34.61738542420664 36.0 36.0 36.0 32.0 36.0 27 34.595640057996604 36.0 36.0 36.0 32.0 36.0 28 34.55718649225853 36.0 36.0 36.0 32.0 36.0 29 34.51439438589257 36.0 36.0 36.0 32.0 36.0 30 34.48687737123879 36.0 36.0 36.0 32.0 36.0 31 34.48444254458993 36.0 36.0 36.0 32.0 36.0 32 34.44842772721874 36.0 36.0 36.0 32.0 36.0 33 34.404710655644024 36.0 36.0 36.0 32.0 36.0 34 34.39325755827113 36.0 36.0 36.0 32.0 36.0 35 34.34475487021354 36.0 36.0 36.0 32.0 36.0 36 34.314032131196036 36.0 36.0 36.0 32.0 36.0 37 34.29699226637205 36.0 36.0 36.0 32.0 36.0 38 33.86322896334426 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 10.0 21 42.0 22 150.0 23 414.0 24 1188.0 25 2926.0 26 6224.0 27 12312.0 28 21536.0 29 33834.0 30 51948.0 31 74885.0 32 107738.0 33 171319.0 34 410954.0 35 889447.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.72016172002333 18.993362329835115 12.202622907834042 26.083853042307513 2 15.335150022521866 21.214757761079976 37.60669874258515 25.84339347381301 3 17.64817931439405 25.62747488419727 29.04609251220775 27.67825328920093 4 11.693617288287335 16.45525793434032 36.74338111669302 35.10774366067932 5 13.768887295300095 37.467295636243435 33.190153115248215 15.57366395320825 6 33.2582043787687 36.56920071420128 16.86423732906202 13.308357577968 7 29.348420436948576 31.12765585537535 21.352449740157002 18.171473967519063 8 27.660046512331483 33.29183714745283 19.65658638032431 19.391529959891376 9 27.623775745001993 14.024285364518581 18.924722989633366 39.42721590084606 10 15.784617194656327 26.602723378984432 31.510183958339756 26.102475468019488 11 37.185533798358406 21.18138779169118 22.95901616382329 18.674062246127125 12 25.14053835405693 24.04088245872929 28.83997171865213 21.978607468561652 13 29.488999568610534 19.650182360092554 25.59248822082659 25.268329850470327 14 23.515125506181747 20.460387286462453 25.44287401424816 30.581613193107636 15 24.713658559541766 28.035073605044897 22.781988333449117 24.46927950196422 16 25.043321002324458 25.982292872945788 24.616021571702213 24.35836455302754 17 23.273099479419944 26.419157704607233 25.84580252917198 24.461940286800843 18 24.47364941633631 24.400593411961914 27.67461169389086 23.45114547781092 19 25.353794990509442 24.928344609206402 26.225424834111326 23.49243556617283 20 25.66926919344826 24.053409317553832 25.900594532452775 24.376726956545124 21 26.754733661675058 24.157543521338944 25.051976857342783 24.03574595964321 22 25.513128791460964 24.75461250064428 25.615653705575337 24.116605002319417 23 23.43327013750695 24.440761756216496 26.621970185912257 25.503997920364295 24 24.523959456158554 25.268021414821405 26.14547781091941 24.06254131810063 25 24.353853850769415 24.76664337909239 26.243396796175084 24.63610597396311 26 23.757626349492696 25.86342321547624 26.76385068322007 23.615099751810995 27 24.726726131150166 25.13172778107389 25.649114727684154 24.49243136009179 28 23.625605905435055 25.096642337075025 26.57333724758142 24.704414509908503 29 23.860236692490247 25.09232844724617 26.532159208305973 24.51527565195761 30 23.58655679880242 25.19199610965572 27.011225077481942 24.21022201405992 31 24.618528885134 24.982184195252255 25.537779590483 24.861507329130745 32 23.870321110271988 25.436039019973872 25.567136451136513 25.12650341861763 33 23.45377863134282 24.927504241057925 26.56089979898394 25.057817328615318 34 24.480820557869993 25.00767536242277 26.684489941353505 23.827014138353732 35 25.187458121653933 24.972043752927284 26.361956645967467 23.478541479451316 36 23.740400194517214 25.668484849843022 26.091414126700624 24.49970082893914 37 24.788339275669884 25.610835594857395 25.55637973883599 24.044445390636728 38 23.990366003353635 25.372885980338715 26.06249324202811 24.574254774279535 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 820.0 1 597.5 2 375.0 3 375.0 4 1115.0 5 1855.0 6 1855.0 7 2165.0 8 2475.0 9 2489.5 10 2504.0 11 2504.0 12 3183.0 13 3862.0 14 4895.0 15 5928.0 16 5928.0 17 8876.5 18 11825.0 19 11825.0 20 13497.5 21 15170.0 22 15694.5 23 16219.0 24 16219.0 25 18526.0 26 20833.0 27 20833.0 28 26900.5 29 32968.0 30 41600.0 31 50232.0 32 50232.0 33 63604.0 34 76976.0 35 76976.0 36 82912.0 37 88848.0 38 97997.0 39 107146.0 40 107146.0 41 110348.5 42 113551.0 43 126205.0 44 138859.0 45 138859.0 46 140760.5 47 142662.0 48 142662.0 49 150455.5 50 158249.0 51 157103.5 52 155958.0 53 155958.0 54 147614.5 55 139271.0 56 139271.0 57 135644.5 58 132018.0 59 117765.0 60 103512.0 61 103512.0 62 99931.0 63 96350.0 64 78950.0 65 61550.0 66 61550.0 67 51576.5 68 41603.0 69 41603.0 70 33488.0 71 25373.0 72 19623.5 73 13874.0 74 13874.0 75 10421.0 76 6968.0 77 6968.0 78 7158.0 79 7348.0 80 5680.0 81 4012.0 82 4012.0 83 3937.0 84 3862.0 85 3862.0 86 2414.5 87 967.0 88 820.5 89 674.0 90 674.0 91 404.5 92 135.0 93 93.5 94 52.0 95 52.0 96 38.0 97 24.0 98 24.0 99 24.0 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006666920644595985 2 0.0 3 0.0 4 5.602454323189903E-5 5 1.1204908646379806E-4 6 5.602454323189903E-5 7 4.4819634585519224E-4 8 0.001624711753725072 9 0.003977742569464831 10 9.524172349422835E-4 11 0.004594012545015721 12 5.602454323189903E-4 13 1.1204908646379806E-4 14 0.0 15 0.0 16 5.602454323189903E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.680736296956971E-4 22 0.0 23 2.2409817292759612E-4 24 0.0 25 1.680736296956971E-4 26 1.1204908646379806E-4 27 5.602454323189903E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.680736296956971E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1784932.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.578689584298154 #Duplication Level Percentage of deduplicated Percentage of total 1 72.64532342936863 33.110786463381345 2 15.578709651681521 14.201143426758033 3 5.4071428425877315 7.393514554807973 4 2.4040508661157336 4.382939526862086 5 1.1959744185774577 2.725547338755171 6 0.6751600867537079 1.846374720831304 7 0.44780751898904775 1.4287335931061553 8 0.27353768749182245 0.9973991478237225 9 0.197626524188881 0.8106802199665917 >10 0.9590164855707103 7.821392899957368 >50 0.08850386581833011 2.868157674669347 >100 0.10196452802700193 10.327738993388403 >500 0.017034946502239943 5.554797873650048 >1k 0.007900265044517074 5.757401233787534 >5k 2.4688328264115857E-4 0.7733923322548953 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 7943 0.445002946890974 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 5803 0.32511042437471005 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 3390 0.1899232015561377 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2647 0.14829696593483674 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2557 0.1432547570439658 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2547 0.1426945116116468 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2521 0.14123787348761746 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2496 0.13983725990681997 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2445 0.13698000820199313 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2404 0.13468300192948526 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2342 0.13120948024910753 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2311 0.12947271940891866 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2192 0.12280579876432268 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2180 0.12213350424553988 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2136 0.11966842434333633 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2028 0.11361777367429123 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1946 0.1090237611292755 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1944 0.10891171204281172 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1891 0.10594241125152107 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1825 0.10224479139821573 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1786 0.10005983421217167 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1204908646379806E-4 2 0.0 0.0 0.0 0.0 1.1204908646379806E-4 3 0.0 0.0 0.0 0.0 1.1204908646379806E-4 4 0.0 0.0 0.0 0.0 1.1204908646379806E-4 5 0.0 0.0 0.0 0.0 1.1204908646379806E-4 6 0.0 0.0 0.0 0.0 1.680736296956971E-4 7 0.0 0.0 0.0 0.0 1.680736296956971E-4 8 0.0 0.0 0.0 0.0 1.680736296956971E-4 9 0.0 0.0 0.0 0.0 2.2409817292759612E-4 10 0.0 0.0 0.0 0.0 2.2409817292759612E-4 11 0.0 0.0 0.0 0.0 2.2409817292759612E-4 12 0.0 0.0 0.0 0.0 6.722945187827884E-4 13 0.0 0.0 0.0 0.0 9.524172349422835E-4 14 0.0 0.0 0.0 0.0 9.524172349422835E-4 15 0.0 0.0 0.0 5.602454323189903E-5 0.0012325399511017787 16 0.0 0.0 0.0 5.602454323189903E-5 0.0014006135807974759 17 0.0 0.0 0.0 5.602454323189903E-5 0.0014006135807974759 18 0.0 0.0 0.0 1.1204908646379806E-4 0.001680736296956971 19 0.0 0.0 0.0 1.1204908646379806E-4 0.001680736296956971 20 0.0 0.0 0.0 1.680736296956971E-4 0.001848809926652668 21 0.0 0.0 0.0 7.283190620146874E-4 0.001848809926652668 22 0.0 0.0 0.0 0.0012325399511017787 0.001904834469884567 23 0.0 0.0 0.0 0.0028012271615949517 0.001960859013116466 24 0.0 0.0 0.0 0.004650037088247619 0.001960859013116466 25 0.0 0.0 0.0 0.006274748841972691 0.001960859013116466 26 0.0 0.0 0.0 0.007395239706610672 0.0023530308157397595 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACACCG 55 2.2188487E-6 23.273726 5 ATCGTTT 450 0.0 18.844198 29 CATCGTT 465 0.0 17.892239 28 TACCGTC 490 0.0 17.306866 7 CGCGTAA 205 0.0 17.171469 10 ACCGTCG 485 0.0 17.155376 8 AATCCCG 180 0.0 16.888666 19 CGTCGTA 515 0.0 16.466726 10 TCTAGCG 535 0.0 16.448381 28 TCGCGTA 215 0.0 16.372795 9 GCGTAAC 215 0.0 16.372337 11 CGGCATC 520 0.0 16.307478 25 TAACGAA 285 0.0 16.280489 13 ATAACGA 295 0.0 16.270973 12 CCGTCGT 515 0.0 16.156033 9 GGCATCG 530 0.0 15.999789 26 AACCGCG 365 0.0 15.7815 7 CGCAAGA 720 0.0 15.777571 2 TTAGGAC 590 0.0 15.728607 3 ATACCGT 540 0.0 15.704377 6 >>END_MODULE