##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062872_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1028492 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227958020091553 32.0 32.0 32.0 32.0 32.0 2 30.8206782357082 32.0 32.0 32.0 32.0 32.0 3 30.877529431439427 32.0 32.0 32.0 32.0 32.0 4 30.937953819767195 32.0 32.0 32.0 32.0 32.0 5 30.841958906826694 32.0 32.0 32.0 32.0 32.0 6 34.520900502872166 36.0 36.0 36.0 32.0 36.0 7 34.43906807247893 36.0 36.0 36.0 32.0 36.0 8 34.40901047358657 36.0 36.0 36.0 32.0 36.0 9 34.57576723980352 36.0 36.0 36.0 32.0 36.0 10 34.256190616942085 36.0 36.0 36.0 32.0 36.0 11 34.575993785075624 36.0 36.0 36.0 32.0 36.0 12 34.37403888411383 36.0 36.0 36.0 32.0 36.0 13 34.47524433831279 36.0 36.0 36.0 32.0 36.0 14 34.367439902303566 36.0 36.0 36.0 32.0 36.0 15 34.304396145035646 36.0 36.0 36.0 32.0 36.0 16 34.32251879450691 36.0 36.0 36.0 32.0 36.0 17 34.24180547831194 36.0 36.0 36.0 32.0 36.0 18 34.27565892588372 36.0 36.0 36.0 32.0 36.0 19 34.276271473185986 36.0 36.0 36.0 32.0 36.0 20 34.248799212828104 36.0 36.0 36.0 32.0 36.0 21 34.22685251805556 36.0 36.0 36.0 32.0 36.0 22 34.194852269147454 36.0 36.0 36.0 32.0 36.0 23 34.1422937660186 36.0 36.0 36.0 32.0 36.0 24 34.124732132092426 36.0 36.0 36.0 32.0 36.0 25 34.0991859926961 36.0 36.0 36.0 32.0 36.0 26 34.0684263951494 36.0 36.0 36.0 32.0 36.0 27 34.05327605854008 36.0 36.0 36.0 32.0 36.0 28 34.040805373303826 36.0 36.0 36.0 32.0 36.0 29 34.01276334672511 36.0 36.0 36.0 32.0 36.0 30 33.97469693492997 36.0 36.0 36.0 32.0 36.0 31 33.98406015797887 36.0 36.0 36.0 32.0 36.0 32 33.944102627925155 36.0 36.0 36.0 32.0 36.0 33 33.904885988417995 36.0 36.0 36.0 32.0 36.0 34 33.89085671060154 36.0 36.0 36.0 32.0 36.0 35 33.85422249273694 36.0 36.0 36.0 32.0 36.0 36 33.80045931324697 36.0 36.0 36.0 32.0 36.0 37 33.80061779770771 36.0 36.0 36.0 32.0 36.0 38 33.185762261641315 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 1.0 8 4.0 9 6.0 10 13.0 11 9.0 12 4.0 13 4.0 14 125.0 15 288.0 16 396.0 17 413.0 18 575.0 19 725.0 20 975.0 21 1391.0 22 2136.0 23 3125.0 24 4722.0 25 7031.0 26 10189.0 27 14567.0 28 20415.0 29 27361.0 30 36696.0 31 49092.0 32 67264.0 33 100697.0 34 222620.0 35 457646.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.20751284215322 17.040712327006922 11.09735310981124 25.65442172102862 2 16.7298830391721 19.69685325467848 37.66492760841713 25.90833609773229 3 19.201526273669348 24.06224504977212 28.351778075763306 28.384450600795226 4 12.432520729942906 14.99245476749794 36.22927005709485 36.34575444546431 5 14.371846104483271 36.71742068469309 33.772326420286056 15.138406790537584 6 34.1253042084067 35.5540020359965 16.932218040251282 13.388475715345521 7 30.074905784391127 30.58380619392275 20.953979223951183 18.387308797734935 8 28.334798266970544 32.78725663303801 19.605284650866125 19.27266044912532 9 27.72076317782689 13.982551101664676 18.62752056657874 39.6691651539297 10 15.739543367629699 26.747665986702785 31.74695620552929 25.765834440138224 11 37.72093584036808 21.253011767039453 22.035730884637896 18.990321507954565 12 24.79865507521447 23.85170434601671 28.935232226078046 22.414408352690774 13 29.698913982091597 19.46692935437947 25.414549994943325 25.419606668585608 14 23.51535789715246 19.74570107234956 25.491444929774133 31.247496100723847 15 25.19637638523518 27.384744056678546 22.7054573038789 24.71342225420737 16 25.475604253697092 25.874874559499638 24.341874956241686 24.307646230561584 17 23.63665008227363 26.05253842353609 25.675305073735068 24.635506420455208 18 24.731069876617397 24.76928357579099 26.934045877830904 23.565600669760713 19 25.1984613170597 25.058536850989682 26.046953944528067 23.69604788742255 20 25.529546064478993 24.133823660966055 25.89340235777322 24.44322791678173 21 26.687922491112616 24.285508700691544 24.848506063646898 24.178062744548942 22 25.42113635833249 24.647124487557466 25.454488879899806 24.477250274210235 23 23.927455960544382 24.406162606622352 26.062236725930475 25.604144706902787 24 24.299553456819897 25.362621846386034 25.95434990625705 24.38347479053702 25 24.582152995165842 24.770520865850372 25.912592251146787 24.734733887837 26 24.2273831045881 25.74757534588944 26.128304147366844 23.896737402155615 27 24.986143389181148 25.088244732056904 25.470492711908904 24.45511916685304 28 24.073249373804003 25.100055229708918 26.11208130435459 24.71461409213249 29 23.96165978848121 25.34997063319499 26.155515708323446 24.532853870000352 30 24.025770719934968 25.59336635376983 26.361995772295117 24.01886715400008 31 24.552863868755797 25.35583226536657 25.24663712012633 24.844666745751308 32 24.164543668929035 25.442231773011027 25.2913206666537 25.101903891406234 33 23.888101797065147 25.036683232869734 25.895591108120485 25.179623861944634 34 24.61581846735806 25.370616178265287 25.997637002786 24.01592835159065 35 25.26810511821131 25.126516053243712 25.888140748866125 23.717238079678857 36 24.062310979203094 25.913085928003376 25.538107565110675 24.486495527682855 37 24.95298476259007 25.758321259444372 25.24402220947306 24.0446717684925 38 24.131929251383177 25.55672238266095 25.753235514327667 24.55811285162821 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 71.0 1 125.5 2 180.0 3 180.0 4 551.0 5 922.0 6 922.0 7 1152.0 8 1382.0 9 1383.0 10 1384.0 11 1384.0 12 1735.5 13 2087.0 14 2625.0 15 3163.0 16 3163.0 17 4605.0 18 6047.0 19 6047.0 20 7113.5 21 8180.0 22 8467.0 23 8754.0 24 8754.0 25 10135.0 26 11516.0 27 11516.0 28 14903.0 29 18290.0 30 22242.5 31 26195.0 32 26195.0 33 32306.5 34 38418.0 35 38418.0 36 42525.5 37 46633.0 38 52537.0 39 58441.0 40 58441.0 41 61966.5 42 65492.0 43 72688.5 44 79885.0 45 79885.0 46 83657.5 47 87430.0 48 87430.0 49 90585.0 50 93740.0 51 93372.0 52 93004.0 53 93004.0 54 88014.0 55 83024.0 56 83024.0 57 80235.5 58 77447.0 59 69007.5 60 60568.0 61 60568.0 62 57289.0 63 54010.0 64 45310.5 65 36611.0 66 36611.0 67 30610.0 68 24609.0 69 24609.0 70 19994.0 71 15379.0 72 12313.5 73 9248.0 74 9248.0 75 7128.5 76 5009.0 77 5009.0 78 4618.0 79 4227.0 80 3303.5 81 2380.0 82 2380.0 83 2307.5 84 2235.0 85 2235.0 86 1519.5 87 804.0 88 682.5 89 561.0 90 561.0 91 412.5 92 264.0 93 242.5 94 221.0 95 221.0 96 191.0 97 161.0 98 161.0 99 340.5 100 520.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11774520365739354 2 0.05260128421028068 3 0.010209121704398284 4 0.002722432454506209 5 1.9445946103615778E-4 6 2.916891915542367E-4 7 0.0 8 3.8891892207231556E-4 9 2.916891915542367E-4 10 5.833783831084734E-4 11 0.0025279729934700513 12 0.0032085811070966036 13 0.014390000116675676 14 0.009334054129735574 15 0.0230434461327847 16 0.011278648740097152 17 0.021001621791905043 18 0.006319932483675128 19 0.0077783784414463125 20 0.006222702753157049 21 0.006611621675229364 22 0.008167297363518627 23 0.009334054129735574 24 0.014390000116675676 25 0.017987500145844597 26 0.01954317583413386 27 0.009917432512844047 28 0.0058337838310847335 29 0.011667567662169467 30 0.003694729759686998 31 0.005639324370048576 32 0.007000540597301681 33 0.009042364938181337 34 0.013320473080976808 35 0.015945675804964938 36 0.016140135266001096 37 0.009917432512844047 38 0.006028243292120892 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1028492.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.82149553899008 #Duplication Level Percentage of deduplicated Percentage of total 1 80.51647834658272 47.360996718787064 2 12.417054775606793 14.607794641815008 3 3.4659968378498913 6.1162535260722315 4 1.2937008307703355 3.0438967058378017 5 0.6242733757894646 1.8360346794555134 6 0.3759167857507278 1.3267192521640752 7 0.244629493102584 1.0072630846067334 8 0.16138567574796706 0.7594357444852754 9 0.12170563236621831 0.6443016580169529 >10 0.6273166148671342 6.991814680687858 >50 0.06830149671196754 2.8348734250985506 >100 0.07493273675796634 9.136747281388354 >500 0.005815178667428286 2.315240662341629 >1k 0.002492219428897837 2.0186279392429864 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3668 0.3566386515403134 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2521 0.24511615063607692 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1338 0.13009337943318955 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1291 0.12552358209883985 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1209 0.11755074419635739 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1165 0.1132726360535619 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1082 0.10520256842056136 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1080 0.1050081089595252 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1079 0.10491087922900712 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1075 0.10452196030693482 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1064 0.10345243327123593 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1037 0.10082723054724782 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.722973051807889E-5 2 0.0 0.0 0.0 9.722973051807889E-5 9.722973051807889E-5 3 0.0 0.0 0.0 9.722973051807889E-5 9.722973051807889E-5 4 0.0 0.0 0.0 9.722973051807889E-5 9.722973051807889E-5 5 0.0 0.0 0.0 1.9445946103615778E-4 9.722973051807889E-5 6 0.0 0.0 0.0 1.9445946103615778E-4 9.722973051807889E-5 7 0.0 0.0 0.0 1.9445946103615778E-4 9.722973051807889E-5 8 0.0 0.0 0.0 1.9445946103615778E-4 9.722973051807889E-5 9 0.0 0.0 0.0 1.9445946103615778E-4 9.722973051807889E-5 10 0.0 0.0 0.0 1.9445946103615778E-4 9.722973051807889E-5 11 0.0 0.0 0.0 1.9445946103615778E-4 9.722973051807889E-5 12 0.0 0.0 0.0 3.8891892207231556E-4 1.9445946103615778E-4 13 0.0 0.0 0.0 3.8891892207231556E-4 3.8891892207231556E-4 14 0.0 0.0 0.0 4.861486525903945E-4 3.8891892207231556E-4 15 0.0 0.0 0.0 5.833783831084734E-4 3.8891892207231556E-4 16 0.0 0.0 0.0 7.778378441446311E-4 4.861486525903945E-4 17 0.0 0.0 0.0 0.001069527035698868 4.861486525903945E-4 18 0.0 0.0 0.0 0.0012639864967350257 4.861486525903945E-4 19 0.0 0.0 0.0 0.0012639864967350257 4.861486525903945E-4 20 0.0 0.0 0.0 0.0016529054188073413 6.806081136265523E-4 21 0.0 0.0 0.0 0.0020418243408796568 7.778378441446311E-4 22 0.0 0.0 0.0 0.0032085811070966036 9.72297305180789E-4 23 0.0 0.0 0.0 0.004180878412277393 9.72297305180789E-4 24 0.0 0.0 0.0 0.005347635178494339 9.72297305180789E-4 25 0.0 0.0 0.0 0.0067088514057474435 9.72297305180789E-4 26 0.0 0.0 0.0 0.008070067633000548 9.72297305180789E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCTAG 35 0.002056626 22.875776 1 GTATTAG 165 0.0 22.32121 1 CGCTTCG 270 0.0 19.555317 32 AGATACG 50 7.1934663E-4 19.200699 17 ATAGGTC 50 7.198176E-4 19.198833 3 GACGTGA 100 3.263267E-9 19.198833 7 GGCGTTA 125 1.4733814E-10 17.91978 31 ATACGAG 45 0.0088502765 17.777561 19 ATTATAC 110 1.0635631E-8 17.453485 3 ACGCTTC 295 0.0 17.35572 31 AAGACGG 305 0.0 16.781784 5 TAGGACG 205 0.0 16.38606 4 AACGCTT 295 0.0 16.270988 30 GTAAACG 295 0.0 16.270988 27 CAAGACG 315 0.0 16.249819 4 ATAACGA 130 4.794856E-9 16.000584 12 TATACAG 190 0.0 15.995138 5 AAACGCT 315 0.0 15.74584 29 TACCGTC 195 0.0 15.588795 7 CGGCGTT 175 3.6379788E-12 15.542667 30 >>END_MODULE