##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062864_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1377165 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.244962658795423 32.0 32.0 32.0 32.0 32.0 2 30.821291566370043 32.0 32.0 32.0 32.0 32.0 3 30.883430090076352 32.0 32.0 32.0 32.0 32.0 4 30.95274059390124 32.0 32.0 32.0 32.0 32.0 5 30.837651987960776 32.0 32.0 32.0 32.0 32.0 6 34.52332073498818 36.0 36.0 36.0 32.0 36.0 7 34.4462573475219 36.0 36.0 36.0 32.0 36.0 8 34.415399752389874 36.0 36.0 36.0 32.0 36.0 9 34.58580417016116 36.0 36.0 36.0 32.0 36.0 10 34.25783838537866 36.0 36.0 36.0 32.0 36.0 11 34.56874884273126 36.0 36.0 36.0 32.0 36.0 12 34.35698482026482 36.0 36.0 36.0 32.0 36.0 13 34.465072086496534 36.0 36.0 36.0 32.0 36.0 14 34.36174895528132 36.0 36.0 36.0 32.0 36.0 15 34.292986679156094 36.0 36.0 36.0 32.0 36.0 16 34.30797035939775 36.0 36.0 36.0 32.0 36.0 17 34.231613495841096 36.0 36.0 36.0 32.0 36.0 18 34.261291856821806 36.0 36.0 36.0 32.0 36.0 19 34.24771614149358 36.0 36.0 36.0 32.0 36.0 20 34.22717176227975 36.0 36.0 36.0 32.0 36.0 21 34.214009214582134 36.0 36.0 36.0 32.0 36.0 22 34.17828219567009 36.0 36.0 36.0 32.0 36.0 23 34.10956276117967 36.0 36.0 36.0 32.0 36.0 24 34.09720331260234 36.0 36.0 36.0 32.0 36.0 25 34.063576986054684 36.0 36.0 36.0 32.0 36.0 26 34.02237640369891 36.0 36.0 36.0 32.0 36.0 27 34.01837252616789 36.0 36.0 36.0 32.0 36.0 28 34.001270000326755 36.0 36.0 36.0 32.0 36.0 29 33.96530989387619 36.0 36.0 36.0 32.0 36.0 30 33.917948829660936 36.0 36.0 36.0 32.0 36.0 31 33.95218655716635 36.0 36.0 36.0 32.0 36.0 32 33.89586868675867 36.0 36.0 36.0 32.0 36.0 33 33.86361111413665 36.0 36.0 36.0 32.0 36.0 34 33.87465699462301 36.0 36.0 36.0 32.0 36.0 35 33.829565810923164 36.0 36.0 36.0 32.0 36.0 36 33.78594068248903 36.0 36.0 36.0 32.0 36.0 37 33.775121354376566 36.0 36.0 36.0 32.0 36.0 38 33.15616647242705 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 4.0 9 5.0 10 10.0 11 14.0 12 7.0 13 7.0 14 120.0 15 279.0 16 433.0 17 484.0 18 651.0 19 834.0 20 1152.0 21 1711.0 22 2596.0 23 3997.0 24 6172.0 25 9303.0 26 13687.0 27 19689.0 28 27810.0 29 37606.0 30 50649.0 31 68108.0 32 92572.0 33 138727.0 34 302831.0 35 597704.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.9627085349283 17.047900782921566 11.04036455398771 25.949026128162423 2 16.776698408408475 19.497304967012276 37.73300465482581 25.992991969753444 3 19.12076978939724 23.652505446623092 28.40312273057371 28.823602033405955 4 12.24119163854657 14.858520879307601 36.437036762714314 36.463250719431514 5 14.371770993308717 36.744834496955704 33.84873998395254 15.03465452578304 6 34.53863553023784 35.85038829769853 16.620375917192202 12.99060025487142 7 30.34240632023033 30.30791517356308 20.82640787414725 18.523270632059337 8 28.287002444888355 33.11193551361898 19.476400328502375 19.124661712990292 9 27.53633922516015 13.719518836563891 18.546982853142914 40.19715908513305 10 15.653698162228416 26.40446949766802 31.647662539565207 26.294169800538352 11 38.482160881012994 20.85122667088797 21.888084162707987 18.77852828539105 12 24.62683207370702 23.63890647782922 28.95678542590086 22.777476022562897 13 29.718443852170314 18.938263894436417 25.45094735618995 25.89234489720332 14 23.34933372063469 19.82208343923605 24.89720779928107 31.93137504084819 15 25.25163757797515 27.54479145256562 22.097697622379858 25.105873347079378 16 25.972782001844553 25.597844636645533 24.114144208913384 24.31522915259653 17 23.98109104853317 25.926891585095362 25.362440936761484 24.729576429609985 18 25.11927290366525 24.46993451427426 26.746177094664564 23.66461548739592 19 25.757211564646106 24.770688837587933 25.2841018431309 24.18799775463506 20 25.65326063908584 24.192428683050952 25.23215587629585 24.922154801567363 21 27.167088574503406 24.110907297916313 24.076196119609783 24.645808007970498 22 25.726541531597473 24.500316613800877 25.13063950178349 24.642502352818152 23 24.1097273156385 24.031661885915547 25.752804909044695 26.105805889401257 24 24.63819688131812 25.133479352095 25.30588413004578 24.9224396365411 25 24.945604810597256 24.500058099000697 25.233993725307926 25.32034336509412 26 24.17861344720903 25.682310049820618 26.058869667523638 24.080206835446717 27 25.40804440778008 24.70204552320312 25.12831722166709 24.761592847349707 28 24.013678158081632 24.890239244317346 25.944930091512074 25.15115250608894 29 24.08415212449983 24.96525130171456 25.818609616348226 25.131986957437384 30 24.230064307747718 25.371062094445833 25.99678461261408 24.40208898519237 31 25.059092212898985 25.096780518268663 24.60523497097129 25.23889229786106 32 24.664742297986674 25.009095365176186 24.79734219269103 25.52882014414611 33 24.146116877816684 24.53092162880103 25.61068419577332 25.712277297608964 34 25.081244694131428 24.984077855474133 25.72771644131174 24.206961009082704 35 25.919045557934368 24.586847081857872 25.57263328520841 23.921474074999345 36 24.15247805894763 25.707542202710997 25.119300500731672 25.020679237609706 37 25.54390174294012 25.298447903875047 24.883137103397793 24.274513249787045 38 24.55376593952421 24.927745664739884 25.44783164376797 25.070656751967935 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 57.0 1 93.0 2 129.0 3 129.0 4 330.0 5 531.0 6 531.0 7 707.0 8 883.0 9 923.0 10 963.0 11 963.0 12 1255.0 13 1547.0 14 2140.5 15 2734.0 16 2734.0 17 3934.0 18 5134.0 19 5134.0 20 6432.5 21 7731.0 22 8647.5 23 9564.0 24 9564.0 25 12298.0 26 15032.0 27 15032.0 28 19652.0 29 24272.0 30 29682.0 31 35092.0 32 35092.0 33 44048.0 34 53004.0 35 53004.0 36 58787.5 37 64571.0 38 73510.0 39 82449.0 40 82449.0 41 84939.5 42 87430.0 43 97717.0 44 108004.0 45 108004.0 46 109937.5 47 111871.0 48 111871.0 49 116950.0 50 122029.0 51 123047.0 52 124065.0 53 124065.0 54 116278.5 55 108492.0 56 108492.0 57 105841.0 58 103190.0 59 92362.5 60 81535.0 61 81535.0 62 79148.0 63 76761.0 64 64427.5 65 52094.0 66 52094.0 67 44437.5 68 36781.0 69 36781.0 70 29850.0 71 22919.0 72 18176.0 73 13433.0 74 13433.0 75 10348.0 76 7263.0 77 7263.0 78 6792.5 79 6322.0 80 5055.5 81 3789.0 82 3789.0 83 3727.5 84 3666.0 85 3666.0 86 2480.5 87 1295.0 88 1075.0 89 855.0 90 855.0 91 628.5 92 402.0 93 351.0 94 300.0 95 300.0 96 280.0 97 260.0 98 260.0 99 488.0 100 716.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12169928803011985 2 0.054024027621962505 3 0.011981135158096526 4 0.0026140658526756055 5 0.0 6 0.0 7 0.0 8 4.356776421126009E-4 9 2.1783882105630046E-4 10 5.809035228168012E-4 11 0.0016700976280983033 12 0.0026866787930277056 13 0.012707264561617526 14 0.008350488140491516 15 0.020622075059996442 16 0.00980274694753352 17 0.018225848028377137 18 0.0051555187649991105 19 0.007696971677322616 20 0.005300744645703311 21 0.006317325810632712 22 0.006753003452745313 23 0.008350488140491516 24 0.012562038680913327 25 0.01488565277218053 26 0.016337911579222535 27 0.007914810498378918 28 0.005736422287815912 29 0.00980274694753352 30 0.0026866787930277056 31 0.005809035228168012 32 0.006535164631689013 33 0.007479132856266316 34 0.011037166933519223 35 0.014014297487955327 36 0.013070329263378026 37 0.009004004603660418 38 0.006172099929928512 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1377165.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.48028474061087 #Duplication Level Percentage of deduplicated Percentage of total 1 78.14149674473616 39.44605005731799 2 13.043532164685859 13.168824353933173 3 4.047350901768594 6.129342778993404 4 1.6632180838773485 3.35838889839447 5 0.847504532580388 2.1391135061808155 6 0.4854929152329086 1.470469236030389 7 0.3043609976609352 1.0754960878102287 8 0.21297688852862984 0.8600907180875661 9 0.15349844221116166 0.6973780563053679 >10 0.8901852538326853 8.427193043235016 >50 0.09286207256417958 3.2936844850917266 >100 0.09798243166125907 10.683233215906744 >500 0.013459904232490641 4.620180507628153 >1k 0.006078666427576419 4.630555055085113 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2965 0.21529736814397696 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2394 0.17383537920292774 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2322 0.16860724749757652 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2080 0.1510349159323683 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2009 0.1458793971673692 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1971 0.1431201054339894 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1940 0.1408691042830743 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1922 0.13956207135673648 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1894 0.1375289090268777 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1874 0.13607665021983567 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1841 0.13368042318821638 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1810 0.13142942203730126 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1687 0.12249803037399296 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1593 0.11567241398089555 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1555 0.11291312224751572 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1540 0.11182392814223423 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1529 0.11102518579836113 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1467 0.10652318349653092 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1428 0.10369127882279901 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1415 0.1027473105982217 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1398 0.101512890612236 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1392 0.1010772129701234 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1381 0.1002784706262503 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 7.261294035210014E-5 6 0.0 0.0 0.0 0.0 7.261294035210014E-5 7 0.0 0.0 0.0 0.0 7.261294035210014E-5 8 0.0 0.0 0.0 0.0 7.261294035210014E-5 9 0.0 0.0 0.0 0.0 7.261294035210014E-5 10 0.0 0.0 0.0 7.261294035210014E-5 1.452258807042003E-4 11 0.0 0.0 0.0 7.261294035210014E-5 1.452258807042003E-4 12 0.0 0.0 0.0 7.261294035210014E-5 2.1783882105630043E-4 13 0.0 0.0 0.0 7.261294035210014E-5 2.1783882105630043E-4 14 0.0 0.0 0.0 7.261294035210014E-5 2.1783882105630043E-4 15 0.0 0.0 0.0 1.452258807042003E-4 2.1783882105630043E-4 16 0.0 0.0 0.0 1.452258807042003E-4 2.1783882105630043E-4 17 0.0 0.0 0.0 1.452258807042003E-4 2.1783882105630043E-4 18 0.0 0.0 0.0 1.452258807042003E-4 2.1783882105630043E-4 19 0.0 0.0 0.0 1.452258807042003E-4 2.1783882105630043E-4 20 0.0 0.0 0.0 2.904517614084006E-4 2.904517614084006E-4 21 0.0 0.0 0.0 3.6306470176050075E-4 2.904517614084006E-4 22 0.0 0.0 0.0 5.809035228168012E-4 2.904517614084006E-4 23 0.0 0.0 0.0 0.0011618070456336023 2.904517614084006E-4 24 0.0 0.0 0.0 0.001960549389506704 2.904517614084006E-4 25 0.0 0.0 0.0 0.0023962270316193047 2.904517614084006E-4 26 0.0 0.0 0.0 0.002904517614084006 2.904517614084006E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 575 0.0 21.147635 29 TCTAGCG 590 0.0 20.881166 28 ACTAGAC 70 7.7981895E-7 20.568254 3 TAGCGGC 600 0.0 20.265747 30 CAAGACG 530 0.0 19.013863 4 CGCTTCG 320 0.0 18.499159 32 AAGACGG 545 0.0 18.490545 5 AGCGGCG 660 0.0 18.423405 31 CGGTCCA 705 0.0 18.38348 10 AGCGCGT 105 5.982656E-9 18.284883 32 GCGCAAG 555 0.0 17.889303 1 CTAGACA 110 1.0672011E-8 17.449951 4 CGCCGGT 725 0.0 17.431791 7 ACGCTTC 340 0.0 17.410976 31 CGCAAGA 575 0.0 17.255777 2 ATCGTTT 400 0.0 17.199842 29 AGGCCCG 480 0.0 17.000463 10 GCCGGTC 780 0.0 16.818527 8 GTCCTAA 335 0.0 16.73085 1 TAGGACG 440 0.0 16.72287 4 >>END_MODULE