##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062863_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1657293 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.168752296666913 32.0 32.0 32.0 32.0 32.0 2 30.75509580985378 32.0 32.0 32.0 32.0 32.0 3 30.815794189681608 32.0 32.0 32.0 32.0 32.0 4 30.877826069379402 32.0 32.0 32.0 32.0 32.0 5 30.78785887588978 32.0 32.0 32.0 32.0 32.0 6 34.44328975021315 36.0 36.0 36.0 32.0 36.0 7 34.34254956727627 36.0 36.0 36.0 32.0 36.0 8 34.31867931621023 36.0 36.0 36.0 32.0 36.0 9 34.471874918918985 36.0 36.0 36.0 32.0 36.0 10 34.16678281993588 36.0 36.0 36.0 32.0 36.0 11 34.479484315688296 36.0 36.0 36.0 32.0 36.0 12 34.27565011135629 36.0 36.0 36.0 32.0 36.0 13 34.37536392176881 36.0 36.0 36.0 32.0 36.0 14 34.26757851508454 36.0 36.0 36.0 32.0 36.0 15 34.20279214357389 36.0 36.0 36.0 32.0 36.0 16 34.22925638375351 36.0 36.0 36.0 32.0 36.0 17 34.14729562002615 36.0 36.0 36.0 32.0 36.0 18 34.17647935518946 36.0 36.0 36.0 32.0 36.0 19 34.16396436840076 36.0 36.0 36.0 32.0 36.0 20 34.135741839252326 36.0 36.0 36.0 32.0 36.0 21 34.11849503980286 36.0 36.0 36.0 32.0 36.0 22 34.08472672001873 36.0 36.0 36.0 32.0 36.0 23 34.04332245414661 36.0 36.0 36.0 32.0 36.0 24 34.015951313376696 36.0 36.0 36.0 32.0 36.0 25 34.00910822648741 36.0 36.0 36.0 32.0 36.0 26 33.96104792574397 36.0 36.0 36.0 32.0 36.0 27 33.96445227247083 36.0 36.0 36.0 32.0 36.0 28 33.934065973850124 36.0 36.0 36.0 32.0 36.0 29 33.89480073831242 36.0 36.0 36.0 32.0 36.0 30 33.86113499544136 36.0 36.0 36.0 32.0 36.0 31 33.88508248088902 36.0 36.0 36.0 32.0 36.0 32 33.831831184950396 36.0 36.0 36.0 32.0 36.0 33 33.79235958879933 36.0 36.0 36.0 32.0 36.0 34 33.79398814814279 36.0 36.0 36.0 32.0 36.0 35 33.750201080919304 36.0 36.0 36.0 32.0 36.0 36 33.700260002304965 36.0 36.0 36.0 27.0 36.0 37 33.70040421337688 36.0 36.0 36.0 27.0 36.0 38 33.085065223831876 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 5.0 9 7.0 10 14.0 11 14.0 12 6.0 13 12.0 14 175.0 15 367.0 16 555.0 17 656.0 18 882.0 19 1167.0 20 1665.0 21 2335.0 22 3525.0 23 5512.0 24 8376.0 25 12347.0 26 18195.0 27 25478.0 28 35559.0 29 47231.0 30 63142.0 31 84302.0 32 112911.0 33 167605.0 34 362077.0 35 703168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.85667113106295 17.733983600744025 11.808600034192805 25.600745234000215 2 16.061330337290293 20.11009371489012 38.61581121065053 25.212764737169064 3 18.312873050902382 24.75703226032262 29.05070444803704 27.879390240737955 4 12.13031265745258 15.770269332536833 36.662774665182276 35.43664334482832 5 14.273620517375374 37.042384908356304 33.56525842219337 15.118736152074957 6 33.24127552658192 36.307965041766934 17.180134822348748 13.270624609302404 7 29.51517927125741 30.981667092059155 21.27891688434091 18.224236752342524 8 27.833179768548604 33.402482741309406 19.743242093525478 19.021095396616506 9 27.997306442815006 13.857036314750362 18.897318993439885 39.24833824899474 10 16.255862772653245 26.56004209309356 31.483534154478516 25.70056097977468 11 37.19580850825036 21.063476987947592 22.918102267474907 18.822612236327146 12 25.027274197402434 23.974683269331493 28.958982503481685 22.039060029784387 13 29.815748325163078 19.541866245993578 25.389688882558943 25.252696546284398 14 23.60997628429876 20.447218987043865 25.234230265579647 30.70857446307773 15 24.840951928584232 27.98328675004783 22.613343440628793 24.562417880739144 16 25.18965487067985 25.73832787496628 24.763244460617383 24.308772793736484 17 23.530629463816904 26.1632026381256 25.76572150731411 24.540446390743384 18 24.700533852603098 24.439490972417918 27.473164055735012 23.386811119243976 19 25.703973776886297 24.610901516084105 25.91867793410912 23.76644677292048 20 25.910942900727985 24.055023461486474 25.527340355687723 24.506693282097824 21 27.221753893481328 23.94530993070813 24.488759003930138 24.344177171880403 22 25.957740826899112 24.594923226855663 25.155763944833165 24.29157200141206 23 23.908803555070644 24.359765038989188 26.190464696106392 25.540966709833775 24 24.745616443729652 25.172702008696202 25.920961711963166 24.160719835610983 25 24.582272934931318 24.619689885896403 26.030610686884696 24.76742649228758 26 24.03805475138218 25.728599181282103 26.58980398688941 23.643542080446306 27 25.03501533674767 25.056075832266732 25.369569454677993 24.539339376307606 28 23.81702356448871 25.162427882744176 26.156274721713835 24.86427383105328 29 24.076865609494995 25.007995770991464 25.926755116991707 24.988383502521835 30 23.791240354421458 25.280225628697423 26.523802282837206 24.404731734043914 31 25.006305855092055 24.8751802750439 25.014331488845578 25.104182381018468 32 24.3159837819017 25.346722497089903 25.045967169152544 25.291326551855853 33 23.809724959538674 24.853331466661196 26.179473284663075 25.157470289137052 34 24.79267673018827 25.032617734633455 26.128404645779245 24.046300889399024 35 25.43764412367675 24.912839311115228 26.01519495810795 23.634321607100073 36 23.84308348531171 25.714378823850325 25.636770277495813 24.805767413342153 37 25.03810823825886 25.431863194140202 25.169118507870873 24.360910059730063 38 24.16711220104442 25.482414164734678 25.6912621757606 24.659211458460305 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 563.0 1 475.5 2 388.0 3 388.0 4 861.5 5 1335.0 6 1335.0 7 1586.5 8 1838.0 9 1801.5 10 1765.0 11 1765.0 12 2294.0 13 2823.0 14 3606.5 15 4390.0 16 4390.0 17 6711.0 18 9032.0 19 9032.0 20 10737.5 21 12443.0 22 13323.5 23 14204.0 24 14204.0 25 16592.0 26 18980.0 27 18980.0 28 24831.0 29 30682.0 30 38539.5 31 46397.0 32 46397.0 33 57890.5 34 69384.0 35 69384.0 36 75448.0 37 81512.0 38 90708.0 39 99904.0 40 99904.0 41 102641.0 42 105378.0 43 117070.5 44 128763.0 45 128763.0 46 129728.0 47 130693.0 48 130693.0 49 138253.5 50 145814.0 51 145502.5 52 145191.0 53 145191.0 54 137775.0 55 130359.0 56 130359.0 57 126611.0 58 122863.0 59 110153.5 60 97444.0 61 97444.0 62 93871.0 63 90298.0 64 74818.0 65 59338.0 66 59338.0 67 50047.0 68 40756.0 69 40756.0 70 32751.0 71 24746.0 72 19281.0 73 13816.0 74 13816.0 75 10483.5 76 7151.0 77 7151.0 78 6996.5 79 6842.0 80 5318.5 81 3795.0 82 3795.0 83 3969.0 84 4143.0 85 4143.0 86 2772.5 87 1402.0 88 1170.0 89 938.0 90 938.0 91 712.5 92 487.0 93 420.5 94 354.0 95 354.0 96 321.5 97 289.0 98 289.0 99 541.0 100 793.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11910989788770002 2 0.05346067352001124 3 0.010861084913772035 4 0.00289628931033921 5 3.0169680316033436E-4 6 6.0339360632066865E-5 7 0.0 8 7.240723275848025E-4 9 3.0169680316033436E-4 10 8.447510488489361E-4 11 0.001870520179594073 12 0.0029566286709712766 13 0.016050269928129787 14 0.0098353157830269 15 0.024377101695355015 16 0.012309229568941642 17 0.021661830466912006 18 0.0056718998994142854 19 0.007783777521536626 20 0.006576990308895289 21 0.0060339360632066874 22 0.008326831767225228 23 0.010076673225555168 24 0.014964161436752584 25 0.017498414583299392 26 0.018825880517204865 27 0.009774976422394832 28 0.00579257862067842 29 0.010076673225555168 30 0.003439343556027812 31 0.006214954145102887 32 0.007964795603432828 33 0.009352600897970364 34 0.013214319978422645 35 0.017860450747091795 36 0.01562789440370532 37 0.010318030668083435 38 0.006456311587631156 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1657293.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.3632495336019 #Duplication Level Percentage of deduplicated Percentage of total 1 76.14771361441113 37.58898588561431 2 13.969098236963129 13.791201640612186 3 4.5433001383527145 6.728161753066594 4 1.9535329776385637 3.8573094338917104 5 1.0000481577608036 2.4682813378582718 6 0.5613883548441454 1.6627172067257876 7 0.3519378399091423 1.2160956788226283 8 0.23226318641343863 0.9172212502716853 9 0.17893324328853705 0.7949453704477878 >10 0.8646405506948643 7.7271108104468995 >50 0.08203852030240871 2.8560911080436973 >100 0.09402116778012751 10.14072562686668 >500 0.015200101415618984 5.279090809517116 >1k 0.005761328762371712 4.618561537521782 >5k 1.2258146302918536E-4 0.35350055029284855 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5842 0.3525025448125346 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4179 0.25215818808140744 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2464 0.14867618459741277 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2442 0.1473487186635073 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2424 0.1462626101721301 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2215 0.13365168380002812 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2194 0.1323845572267547 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2094 0.12635062116354803 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2067 0.12472145842648222 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2031 0.12254924144372782 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2017 0.12170449039487886 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2010 0.12128211487045441 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1940 0.11705835962620972 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1875 0.11313630118512537 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1825 0.11011933315352204 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1802 0.10873152785898449 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1729 0.10432675453284361 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1696 0.10233555563198542 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1677 0.10118910777997614 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1660 0.10016333864923099 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 6.033936063206687E-5 3 0.0 0.0 0.0 0.0 6.033936063206687E-5 4 0.0 0.0 0.0 0.0 6.033936063206687E-5 5 0.0 0.0 0.0 0.0 6.033936063206687E-5 6 0.0 0.0 0.0 0.0 6.033936063206687E-5 7 0.0 0.0 0.0 0.0 6.033936063206687E-5 8 0.0 0.0 0.0 0.0 6.033936063206687E-5 9 0.0 0.0 0.0 0.0 6.033936063206687E-5 10 0.0 0.0 0.0 0.0 6.033936063206687E-5 11 0.0 0.0 0.0 0.0 6.033936063206687E-5 12 0.0 0.0 0.0 0.0 3.0169680316033436E-4 13 0.0 0.0 0.0 0.0 3.0169680316033436E-4 14 0.0 0.0 0.0 6.033936063206687E-5 3.0169680316033436E-4 15 0.0 0.0 0.0 6.033936063206687E-5 4.223755244244681E-4 16 0.0 0.0 0.0 1.2067872126413374E-4 4.223755244244681E-4 17 0.0 0.0 0.0 1.2067872126413374E-4 4.223755244244681E-4 18 0.0 0.0 0.0 1.8101808189620062E-4 4.223755244244681E-4 19 0.0 0.0 0.0 1.8101808189620062E-4 4.223755244244681E-4 20 0.0 0.0 0.0 4.223755244244681E-4 4.82714885056535E-4 21 0.0 0.0 0.0 7.844116882168693E-4 6.033936063206687E-4 22 0.0 0.0 0.0 0.0012067872126413374 6.033936063206687E-4 23 0.0 0.0 0.0 0.0019911989008582066 7.240723275848025E-4 24 0.0 0.0 0.0 0.0035600222772919454 7.240723275848025E-4 25 0.0 0.0 0.0 0.003982397801716413 7.240723275848025E-4 26 0.0 0.0 0.0 0.0044047733261408815 7.240723275848025E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATTA 55 5.83651E-5 20.363081 32 CTAGCGG 410 0.0 16.78003 29 ACCGTCG 440 0.0 16.724796 8 TAGGACG 750 0.0 16.637035 4 TCTAGCG 420 0.0 16.379515 28 ATACCGT 450 0.0 16.352148 6 GTCCTAC 905 0.0 16.281946 1 ATCGTTT 455 0.0 16.175383 29 TAGCGGC 440 0.0 15.999563 30 TACCGTC 460 0.0 15.997632 7 TTAGGAC 530 0.0 15.997149 3 CCGTCGT 465 0.0 15.828481 9 CATCGTT 465 0.0 15.826569 28 GACGTGA 465 0.0 15.825615 7 AGGACGT 800 0.0 15.596748 5 TGTAGGA 880 0.0 15.458321 2 TCCTACA 1060 0.0 15.399988 2 CCTACAG 1065 0.0 15.321213 3 CTAGACA 210 0.0 15.235379 4 GGACGTG 820 0.0 15.216341 6 >>END_MODULE