##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062858_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1271853 Sequences flagged as poor quality 0 Sequence length 38 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27562619264962 32.0 32.0 32.0 32.0 32.0 2 31.401032981012744 32.0 32.0 32.0 32.0 32.0 3 31.455800316546014 32.0 32.0 32.0 32.0 32.0 4 31.5373954379948 32.0 32.0 32.0 32.0 32.0 5 31.509297064991003 32.0 32.0 32.0 32.0 32.0 6 35.038133337736355 36.0 36.0 36.0 36.0 36.0 7 35.06066974721135 36.0 36.0 36.0 36.0 36.0 8 34.98343519258908 36.0 36.0 36.0 36.0 36.0 9 35.101863187019255 36.0 36.0 36.0 36.0 36.0 10 34.99113891306621 36.0 36.0 36.0 36.0 36.0 11 35.11637665673627 36.0 36.0 36.0 36.0 36.0 12 35.06122091153616 36.0 36.0 36.0 36.0 36.0 13 35.077540407578546 36.0 36.0 36.0 36.0 36.0 14 35.049526163794084 36.0 36.0 36.0 36.0 36.0 15 35.02111171652699 36.0 36.0 36.0 36.0 36.0 16 35.05006474804871 36.0 36.0 36.0 36.0 36.0 17 35.06356788087932 36.0 36.0 36.0 36.0 36.0 18 35.06110140086944 36.0 36.0 36.0 36.0 36.0 19 35.00909774950407 36.0 36.0 36.0 36.0 36.0 20 34.99926799716634 36.0 36.0 36.0 36.0 36.0 21 34.9679082409681 36.0 36.0 36.0 36.0 36.0 22 34.955507436787116 36.0 36.0 36.0 36.0 36.0 23 34.926647183282974 36.0 36.0 36.0 36.0 36.0 24 34.91161321316221 36.0 36.0 36.0 36.0 36.0 25 34.88724954849342 36.0 36.0 36.0 36.0 36.0 26 34.84132914731498 36.0 36.0 36.0 32.0 36.0 27 34.77084537285362 36.0 36.0 36.0 32.0 36.0 28 34.72445557780655 36.0 36.0 36.0 32.0 36.0 29 34.70075944311174 36.0 36.0 36.0 32.0 36.0 30 34.639970971488054 36.0 36.0 36.0 32.0 36.0 31 34.63125927288767 36.0 36.0 36.0 32.0 36.0 32 34.6102324718344 36.0 36.0 36.0 32.0 36.0 33 34.631247479071874 36.0 36.0 36.0 32.0 36.0 34 34.5909197053433 36.0 36.0 36.0 32.0 36.0 35 34.582908559401126 36.0 36.0 36.0 32.0 36.0 36 34.5162900115029 36.0 36.0 36.0 32.0 36.0 37 34.44639278281374 36.0 36.0 36.0 32.0 36.0 38 34.099192280868934 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 7.0 21 13.0 22 59.0 23 173.0 24 515.0 25 1420.0 26 3201.0 27 6621.0 28 12180.0 29 20442.0 30 32255.0 31 46838.0 32 67025.0 33 107310.0 34 272629.0 35 701164.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.262961189363544 22.599684369198396 13.740240725494775 25.397113715943288 2 10.704932095139926 22.367364781936278 47.73822131960219 19.18948180332161 3 17.0838925567656 28.890838799766954 31.496800337774882 22.528468305692563 4 9.964075924107343 19.150072060441136 41.42229148271532 29.4635605327362 5 9.442608102200571 42.07950296103635 36.745470384919 11.732418551844082 6 27.813928035651948 40.794133279658325 19.858599899988363 11.533338784701366 7 25.168317937113606 33.31433212590488 24.402267879284413 17.1150820576971 8 21.69443922444939 43.99478227640883 20.861144549656828 13.449633949484952 9 26.331229743181677 15.36042786803523 22.30235399758137 36.00598839120172 10 14.754688705199504 30.564075629426192 35.66671095969361 19.0145247056807 11 32.016232009863124 21.43192997685185 29.965372131642514 16.58646588164251 12 25.09879340737794 24.744190727493738 34.87820066265884 15.278815202469481 13 29.542532891038338 24.384302878245958 27.006937133359177 19.06622709735653 14 18.088961538794184 26.609364446991908 28.45030046711373 26.851373547100177 15 18.718043673286143 40.72396731383265 22.977262309402107 17.580726703479097 16 17.16309536258571 29.306892080911993 34.930035043413106 18.59997751308919 17 17.539762849951998 33.529110675526184 31.158003322711036 17.773123151810783 18 18.232531589735608 27.769011041370344 38.09339601353301 15.905061355361036 19 23.419687652582493 26.533569524150984 29.117751815657943 20.928991007608584 20 23.902683722096814 29.481866221961184 30.59614593824915 16.019304117692844 21 20.650689428242774 27.66794223537191 27.841704727990933 23.83966360839438 22 22.543957517103 33.39513292809782 28.190050265242917 15.870859289556261 23 17.288188632158956 33.20703447180527 31.434185293717583 18.070591602318196 24 22.533107206571827 28.28322141002144 32.298150808308826 16.88552057509791 25 19.623730100884302 30.90797442786234 31.960140047631292 17.508155423622068 26 15.992033664294272 32.91829552495102 33.05872066875706 18.030950141997653 27 18.14697982777816 32.16744453739755 31.028236078525108 18.657339556299178 28 16.885284698782012 32.84239609451721 29.217212995527 21.055106211173776 29 19.88712532030038 29.827425024747356 28.517603842582435 21.767845812369828 30 17.186577379618555 30.162605269634145 31.45945325442484 21.191364096322452 31 21.811718807126297 27.99765381691123 30.516498368915272 19.6741290070472 32 18.48468337142736 31.948660733591066 30.71078182777412 18.855874067207452 33 16.537131256520997 32.688447485676406 33.652159486984736 17.122261770817854 34 18.918931668990048 31.65939774486517 32.825177123456875 16.596493462687906 35 17.701731253533232 32.853089154171116 31.92035557568367 17.524824016611984 36 16.575972223205042 31.27845749469475 33.65837089663664 18.48719938546357 37 17.49274483765026 31.332551796473336 28.951380387513336 22.223322978363065 38 18.797548771397928 34.14941361101763 28.87725930375547 18.175778313828967 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 222.0 1 169.5 2 117.0 3 117.0 4 402.5 5 688.0 6 688.0 7 862.0 8 1036.0 9 1067.5 10 1099.0 11 1099.0 12 1465.5 13 1832.0 14 2605.0 15 3378.0 16 3378.0 17 5472.5 18 7567.0 19 7567.0 20 9985.5 21 12404.0 22 16120.0 23 19836.0 24 19836.0 25 28734.5 26 37633.0 27 37633.0 28 51852.0 29 66071.0 30 91303.0 31 116535.0 32 116535.0 33 144115.0 34 171695.0 35 171695.0 36 178483.5 37 185272.0 38 184071.0 39 182870.0 40 182870.0 41 158839.5 42 134809.0 43 113263.0 44 91717.0 45 91717.0 46 79182.0 47 66647.0 48 66647.0 49 58097.5 50 49548.0 51 42165.5 52 34783.0 53 34783.0 54 29267.5 55 23752.0 56 23752.0 57 21052.0 58 18352.0 59 15197.0 60 12042.0 61 12042.0 62 11824.5 63 11607.0 64 9268.0 65 6929.0 66 6929.0 67 5903.5 68 4878.0 69 4878.0 70 4041.0 71 3204.0 72 2480.0 73 1756.0 74 1756.0 75 1318.5 76 881.0 77 881.0 78 1003.5 79 1126.0 80 840.0 81 554.0 82 554.0 83 615.5 84 677.0 85 677.0 86 422.0 87 167.0 88 150.0 89 133.0 90 133.0 91 77.0 92 21.0 93 15.5 94 10.0 95 10.0 96 6.5 97 3.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008963300004009897 2 0.0 3 0.0 4 3.1450175452666306E-4 5 7.862543863166577E-5 6 7.862543863166577E-5 7 3.1450175452666306E-4 8 0.002673264913476636 9 0.00463890087926828 10 0.0015725087726333152 11 0.003538144738424959 12 5.503780704216603E-4 13 1.5725087726333153E-4 14 0.0 15 0.0 16 1.5725087726333153E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 1.5725087726333153E-4 22 0.0 23 1.5725087726333153E-4 24 0.0 25 0.0 26 7.862543863166577E-5 27 3.931271931583288E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 7.862543863166577E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1271853.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.783473628262726 #Duplication Level Percentage of deduplicated Percentage of total 1 85.60411507892648 50.32107241212842 2 9.394497822740693 11.044824300276982 3 2.023257422145721 3.5680229795366945 4 0.7950558233680546 1.8694457210381095 5 0.4421873946385753 1.299665552574345 6 0.2928952008260528 1.0330438388161793 7 0.20609951059917692 0.8480671602273201 8 0.15403533703842648 0.7243785738095124 9 0.1247446126962857 0.6599629485629963 >10 0.7933701920211884 9.073288316524703 >50 0.09346865520573128 3.7954920852566048 >100 0.06710942354165148 7.797402064718581 >500 0.004716520864998093 1.9523397900685573 >1k 0.00390797443099842 4.0857657101418505 >5k 5.390309559997821E-4 1.9272285463189942 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 6874 0.5404712651540705 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 6321 0.4969913975907593 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAG 6104 0.4799296774076879 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 5030 0.3954859563172788 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3583 0.2817149466172585 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 3493 0.2746386571404085 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAA 3238 0.25458917028933375 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 2728 0.2144901965871842 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCA 2620 0.20599864921496433 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2546 0.20018036675622103 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCAT 2362 0.18571328604799453 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2113 0.16613555182870976 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTA 2050 0.1611821491949148 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTT 1712 0.1346067509374118 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAG 1693 0.13311286760341015 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATG 1600 0.12580070181066522 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTT 1516 0.1191961649656053 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTC 1479 0.11628702373623367 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCA 1463 0.11502901671812701 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1451 0.11408551145454703 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACG 1426 0.11211987548875538 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAA 1364 0.1072450982935921 No Hit TTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGT 1316 0.10347107723927215 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 7.862543863166577E-5 0.0 6 0.0 0.0 0.0 7.862543863166577E-5 0.0 7 0.0 0.0 0.0 7.862543863166577E-5 0.0 8 0.0 0.0 0.0 7.862543863166577E-5 0.0 9 0.0 0.0 0.0 7.862543863166577E-5 0.0 10 0.0 0.0 0.0 7.862543863166577E-5 0.0 11 0.0 0.0 0.0 7.862543863166577E-5 0.0 12 0.0 0.0 0.0 7.862543863166577E-5 0.0 13 0.0 0.0 0.0 7.862543863166577E-5 0.0 14 0.0 0.0 0.0 7.862543863166577E-5 0.0 15 0.0 0.0 0.0 7.862543863166577E-5 0.0 16 0.0 0.0 0.0 7.862543863166577E-5 0.0 17 0.0 0.0 0.0 7.862543863166577E-5 0.0 18 0.0 0.0 0.0 7.862543863166577E-5 0.0 19 0.0 0.0 0.0 7.862543863166577E-5 0.0 20 0.0 0.0 0.0 2.358763158949973E-4 0.0 21 0.0 0.0 0.0 3.9312719315832886E-4 0.0 22 0.0 0.0 0.0 5.503780704216604E-4 0.0 23 0.0 0.0 0.0 9.435052635799892E-4 0.0 24 0.0 0.0 0.0 0.001651134211264981 0.0 25 0.0 0.0 0.0 0.0024373885975816387 0.0 26 0.0 0.0 0.0 0.002987766668003299 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGGG 110 1.8189894E-12 21.817726 31 ACCGGGA 45 3.5366145E-4 21.333727 8 ACCCACG 75 6.4052074E-8 21.332888 14 GGCGGGT 115 1.8189894E-12 20.86913 32 CCCGGCG 110 2.3646862E-11 20.36321 29 GACCGGG 40 0.0044822395 20.001156 7 CGGAAGC 130 0.0 19.691896 20 TTGCGAG 90 2.039269E-8 19.555147 18 CTGCCCG 115 4.5474735E-11 19.477854 26 CGCCACT 50 7.197525E-4 19.199598 17 TAGGACC 1645 0.0 19.06493 4 CGCTTCG 85 2.3970279E-7 18.823137 32 TCCGACT 120 8.185452E-11 18.666277 22 ATTGCGA 95 3.7913196E-8 18.525928 17 TTCGTTC 115 9.422365E-10 18.086578 29 TGCCCGG 125 1.4733814E-10 17.919626 27 ACGCTTC 90 4.368594E-7 17.777407 31 ATAGCGT 100 6.811388E-8 17.601017 6 CGTATGT 110 1.063745E-8 17.454182 23 TCCCCGA 120 1.6607373E-9 17.332972 22 >>END_MODULE