##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062851_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 757037 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.183529999194228 32.0 32.0 32.0 32.0 32.0 2 30.84978541339459 32.0 32.0 32.0 32.0 32.0 3 30.916227344238127 32.0 32.0 32.0 32.0 32.0 4 30.964585614705754 32.0 32.0 32.0 32.0 32.0 5 30.918096473488085 32.0 32.0 32.0 32.0 32.0 6 34.566552229283374 36.0 36.0 36.0 32.0 36.0 7 34.45109023733318 36.0 36.0 36.0 32.0 36.0 8 34.44846024698925 36.0 36.0 36.0 32.0 36.0 9 34.53181812777975 36.0 36.0 36.0 32.0 36.0 10 34.305373449382266 36.0 36.0 36.0 32.0 36.0 11 34.55667292351629 36.0 36.0 36.0 32.0 36.0 12 34.39069424612007 36.0 36.0 36.0 32.0 36.0 13 34.46349385829226 36.0 36.0 36.0 32.0 36.0 14 34.3601646947243 36.0 36.0 36.0 32.0 36.0 15 34.33317261903976 36.0 36.0 36.0 32.0 36.0 16 34.330204468209615 36.0 36.0 36.0 32.0 36.0 17 34.26324076630336 36.0 36.0 36.0 32.0 36.0 18 34.28563993569667 36.0 36.0 36.0 32.0 36.0 19 34.269052899660124 36.0 36.0 36.0 32.0 36.0 20 34.22253469777567 36.0 36.0 36.0 32.0 36.0 21 34.19963885516824 36.0 36.0 36.0 32.0 36.0 22 34.18006913796816 36.0 36.0 36.0 32.0 36.0 23 34.13585597533542 36.0 36.0 36.0 32.0 36.0 24 34.117700984231945 36.0 36.0 36.0 32.0 36.0 25 34.08078072802254 36.0 36.0 36.0 32.0 36.0 26 34.03927284927949 36.0 36.0 36.0 32.0 36.0 27 34.04081174367963 36.0 36.0 36.0 32.0 36.0 28 34.01353566602425 36.0 36.0 36.0 32.0 36.0 29 33.99475719152432 36.0 36.0 36.0 32.0 36.0 30 33.94124461552077 36.0 36.0 36.0 32.0 36.0 31 33.966952738109235 36.0 36.0 36.0 32.0 36.0 32 33.90127431023847 36.0 36.0 36.0 32.0 36.0 33 33.85226745852581 36.0 36.0 36.0 32.0 36.0 34 33.837208749374206 36.0 36.0 36.0 32.0 36.0 35 33.78340820858161 36.0 36.0 36.0 32.0 36.0 36 33.752659381245564 36.0 36.0 36.0 27.0 36.0 37 33.73307117089389 36.0 36.0 36.0 27.0 36.0 38 33.10788112073782 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 3.0 9 2.0 10 5.0 11 4.0 12 2.0 13 2.0 14 167.0 15 319.0 16 376.0 17 449.0 18 575.0 19 707.0 20 877.0 21 1213.0 22 1797.0 23 2551.0 24 3564.0 25 5115.0 26 7320.0 27 10577.0 28 14852.0 29 19896.0 30 27143.0 31 35796.0 32 48598.0 33 71981.0 34 159158.0 35 343984.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.40291575417103 16.77682737169518 11.472847303773765 25.347409570360025 2 16.565782587319795 20.19827025655394 37.077145923314006 26.158801232812262 3 19.0288909820873 25.094028791900115 27.89342478819577 27.98365543781681 4 12.585202954759211 15.613804728037453 35.28617624990753 36.514816067295804 5 14.769178744471862 36.5777849402142 32.61826386063543 16.03477245467851 6 33.858276037435516 34.878968607792245 17.29074613459087 13.972009220181366 7 30.148724566963043 30.62637625373661 20.902148772120782 18.32275040717957 8 28.872831988164272 31.36058016194867 19.787194695058318 19.97939315482874 9 28.226303935749335 14.401711941984189 18.269432721076303 39.10255140119017 10 16.506347172503073 26.32432004015693 30.577916330924797 26.5914164564152 11 37.394784814139655 21.465218884573723 21.6011466011466 19.538849700140023 12 25.65318531454213 23.836458962168816 27.98839133920988 22.521964384079173 13 30.100709577780744 19.38054956277273 24.93932720241925 25.579413657027278 14 24.684137938323012 19.72757392572552 24.778460611697067 30.809827524254402 15 25.77974499570589 26.084957389178832 23.23102332034089 24.904274294774396 16 25.99120688652973 25.498972199176702 23.756863014494897 24.752957899798666 17 24.043040075256712 25.307712227630418 25.348405815483645 25.30084188162922 18 25.46268041563959 23.778536912716213 26.77852898671338 23.98025368493082 19 25.4525518999716 25.17288981948123 25.74476376678534 23.62979451376183 20 25.990322337751202 23.254130443685014 25.807099330119776 24.948447888444004 21 27.540905211930344 23.70349038433594 24.300192603904392 24.455411799829324 22 26.028882964810446 23.88406126401281 24.90336677296542 25.18368899821133 23 24.212188065577237 23.69473030635296 25.72281596364453 26.370265664425276 24 24.582193862048012 25.35531687210178 25.13931275018826 24.92317651566195 25 25.31093853629664 23.891335998583703 25.189786788778466 25.607938676341192 26 24.526875980995765 24.956796550065796 25.93884928205643 24.577478186882008 27 25.605726944990835 24.508608515646984 24.94666326720679 24.939001272155387 28 24.393359550962554 24.217004823004583 26.01925767209117 25.37037795394169 29 24.121895572057607 24.831063897810008 26.327609872870216 24.719430657262173 30 24.512624601394425 24.840359623467993 26.3511639150663 24.29585186007128 31 24.775924998778073 24.96020480818387 24.748712353088038 25.515157839950014 32 24.241375438411087 25.122226698987443 24.819582692091757 25.81681517050971 33 24.05410439627943 24.42835421232501 25.462329966009715 26.055211425385842 34 24.901809246378534 24.856231298178862 25.711115074410955 24.530844381031645 35 25.97557189380578 24.501958608298157 25.60313905788629 23.919330440009777 36 24.425930843509427 25.709552251820206 24.972619335439234 24.891897569231137 37 25.548073963398764 25.542393413732928 24.97248896586254 23.93704365700577 38 24.234538186564226 25.48765247809098 25.1745720573743 25.103237277970496 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 619.0 1 486.5 2 354.0 3 354.0 4 752.0 5 1150.0 6 1150.0 7 1323.5 8 1497.0 9 1400.5 10 1304.0 11 1304.0 12 1644.0 13 1984.0 14 2373.5 15 2763.0 16 2763.0 17 3944.5 18 5126.0 19 5126.0 20 5821.0 21 6516.0 22 5992.5 23 5469.0 24 5469.0 25 5925.5 26 6382.0 27 6382.0 28 8259.5 29 10137.0 30 12590.0 31 15043.0 32 15043.0 33 18719.0 34 22395.0 35 22395.0 36 24855.5 37 27316.0 38 32188.0 39 37060.0 40 37060.0 41 40258.5 42 43457.0 43 50681.0 44 57905.0 45 57905.0 46 63324.5 47 68744.0 48 68744.0 49 71127.0 50 73510.0 51 72152.5 52 70795.0 53 70795.0 54 67573.5 55 64352.0 56 64352.0 57 63253.0 58 62154.0 59 55641.0 60 49128.0 61 49128.0 62 46851.5 63 44575.0 64 36412.5 65 28250.0 66 28250.0 67 23531.5 68 18813.0 69 18813.0 70 15054.5 71 11296.0 72 8865.0 73 6434.0 74 6434.0 75 4859.0 76 3284.0 77 3284.0 78 3291.0 79 3298.0 80 2564.5 81 1831.0 82 1831.0 83 1942.0 84 2053.0 85 2053.0 86 1360.0 87 667.0 88 585.5 89 504.0 90 504.0 91 368.0 92 232.0 93 193.0 94 154.0 95 154.0 96 142.5 97 131.0 98 131.0 99 243.0 100 355.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11478963379597035 2 0.05191291839104298 3 0.011624266713515984 4 0.002773972738452678 5 1.32093939926318E-4 6 2.64187879852636E-4 7 0.0 8 9.246575794842261E-4 9 2.64187879852636E-4 10 9.246575794842261E-4 11 0.002245596978747406 12 0.002113503038821088 13 0.014266145512042345 14 0.008057730335505399 15 0.024701566766221462 16 0.010699609134031758 17 0.0212671243281372 18 0.00462328789742113 19 0.006868884876168536 20 0.004755381837347448 21 0.005680039416831674 22 0.006736790936242218 23 0.008850293975063307 24 0.014134051572116025 25 0.01783268189005293 26 0.020210372808726652 27 0.007133072756021173 28 0.00528375759705272 29 0.012416830353073892 30 0.003038160618305314 31 0.004755381837347448 32 0.005547945476905356 33 0.007397260635873809 34 0.012152642473221256 35 0.016115460671010797 36 0.01532289703145289 37 0.008982387914989624 38 0.005680039416831674 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 757037.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.19969630499401 #Duplication Level Percentage of deduplicated Percentage of total 1 79.44475596383212 42.264368903002314 2 12.807578687319188 13.627185931353896 3 3.6405504226534617 5.810285306045453 4 1.4370423929561937 3.0580087553068553 5 0.7386983200761695 1.9649263144530742 6 0.4206452866738392 1.3426920901905237 7 0.2702096986842201 1.0062551736065117 8 0.18756874477563454 0.7982880206698153 9 0.12887250627262367 0.6170380376190314 >10 0.6957883809730739 7.129677224199227 >50 0.10342826753589672 3.923904541556063 >100 0.11190166942765249 12.300581974972033 >500 0.010467416739235874 3.821673904810379 >1k 0.0024922420807704463 2.3351138222148347 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3819 0.5044667565786085 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2525 0.33353719831395295 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2490 0.32891391041653184 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1962 0.25916831013543595 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1413 0.18664873711588734 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1188 0.1569276006324658 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1087 0.14358611269990768 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1053 0.13909491874241287 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1045 0.1380381672230023 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1030 0.13605675812410756 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 997 0.13169765810653905 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 983 0.12984834294757058 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 975 0.12879159142816005 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 935 0.12350783383110733 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 900 0.11888454593368619 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 884 0.1167710428948651 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 878 0.1159784792553072 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 862 0.11386497621648613 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 820 0.10831703073958077 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 802 0.10593933982090703 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 761 0.100523488283928 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.64187879852636E-4 13 0.0 0.0 0.0 0.0 2.64187879852636E-4 14 0.0 0.0 0.0 0.0 2.64187879852636E-4 15 0.0 0.0 0.0 0.0 5.28375759705272E-4 16 0.0 0.0 0.0 2.64187879852636E-4 5.28375759705272E-4 17 0.0 0.0 0.0 2.64187879852636E-4 5.28375759705272E-4 18 0.0 0.0 0.0 2.64187879852636E-4 5.28375759705272E-4 19 0.0 0.0 0.0 2.64187879852636E-4 5.28375759705272E-4 20 0.0 0.0 0.0 2.64187879852636E-4 6.6046969963159E-4 21 0.0 0.0 0.0 5.28375759705272E-4 6.6046969963159E-4 22 0.0 0.0 0.0 0.00132093939926318 6.6046969963159E-4 23 0.0 0.0 0.0 0.00264187879852636 6.6046969963159E-4 24 0.0 0.0 0.0 0.004491193957494812 6.6046969963159E-4 25 0.0 0.0 0.0 0.005547945476905356 6.6046969963159E-4 26 0.0 0.0 0.0 0.007000978816094854 9.24657579484226E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 250 0.0 21.759058 28 CTAGCGG 260 0.0 20.92217 29 GCCTTAT 40 0.004454153 20.021616 1 TATAATA 40 0.0044780746 20.003098 2 TTTAGAC 40 0.004483214 19.999132 3 ACACCGT 40 0.0044866432 19.99649 6 TCTTAGG 50 7.185342E-4 19.202972 2 TAAATAC 75 1.5078022E-6 19.199165 3 CGTTTAT 265 0.0 18.112421 31 GTCTTAG 45 0.008792666 17.796993 1 CGGTCCA 310 0.0 17.547626 10 GTAGACT 55 0.0013656674 17.451483 4 TAGCGGC 305 0.0 17.310724 30 ATCGTTT 290 0.0 17.102707 29 GGTCCAA 330 0.0 16.968962 11 GCGGCGC 335 0.0 16.715693 32 AGCGGCG 320 0.0 16.499285 31 GATATAC 80 5.565123E-5 16.017294 1 GCAATTA 60 0.0024405024 16.000362 13 GTTTTCG 250 0.0 15.999307 28 >>END_MODULE