##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062851_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 757037 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13762735506983 32.0 32.0 32.0 32.0 32.0 2 31.325221884795592 32.0 32.0 32.0 32.0 32.0 3 31.39533866904788 32.0 32.0 32.0 32.0 32.0 4 31.500276736804146 32.0 32.0 32.0 32.0 32.0 5 31.42230168406564 32.0 32.0 32.0 32.0 32.0 6 34.94654158251182 36.0 36.0 36.0 36.0 36.0 7 34.973087180679414 36.0 36.0 36.0 36.0 36.0 8 34.927847648133444 36.0 36.0 36.0 36.0 36.0 9 35.014241047663454 36.0 36.0 36.0 36.0 36.0 10 34.86780170586114 36.0 36.0 36.0 32.0 36.0 11 35.031555921309 36.0 36.0 36.0 36.0 36.0 12 34.9315158968452 36.0 36.0 36.0 32.0 36.0 13 34.979549216220605 36.0 36.0 36.0 36.0 36.0 14 34.93105092617666 36.0 36.0 36.0 32.0 36.0 15 34.89877113007687 36.0 36.0 36.0 32.0 36.0 16 34.90253052360717 36.0 36.0 36.0 32.0 36.0 17 34.86610826155128 36.0 36.0 36.0 32.0 36.0 18 34.85411413180598 36.0 36.0 36.0 32.0 36.0 19 34.84496530552668 36.0 36.0 36.0 32.0 36.0 20 34.82817220294385 36.0 36.0 36.0 32.0 36.0 21 34.81452821988886 36.0 36.0 36.0 32.0 36.0 22 34.78797073326667 36.0 36.0 36.0 32.0 36.0 23 34.719980661447195 36.0 36.0 36.0 32.0 36.0 24 34.70323247080394 36.0 36.0 36.0 32.0 36.0 25 34.67155238119141 36.0 36.0 36.0 32.0 36.0 26 34.61496201638757 36.0 36.0 36.0 32.0 36.0 27 34.59470012694228 36.0 36.0 36.0 32.0 36.0 28 34.55440090774955 36.0 36.0 36.0 32.0 36.0 29 34.51040966293589 36.0 36.0 36.0 32.0 36.0 30 34.47980613893377 36.0 36.0 36.0 32.0 36.0 31 34.463117390563475 36.0 36.0 36.0 32.0 36.0 32 34.43076097997852 36.0 36.0 36.0 32.0 36.0 33 34.3766566231241 36.0 36.0 36.0 32.0 36.0 34 34.35853597644501 36.0 36.0 36.0 32.0 36.0 35 34.29250617869404 36.0 36.0 36.0 32.0 36.0 36 34.26275994436203 36.0 36.0 36.0 32.0 36.0 37 34.228398347769 36.0 36.0 36.0 32.0 36.0 38 33.79898868879592 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 2.0 21 15.0 22 35.0 23 192.0 24 518.0 25 1212.0 26 2668.0 27 5232.0 28 9409.0 29 14765.0 30 22350.0 31 31836.0 32 44481.0 33 70824.0 34 167201.0 35 386296.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.7977322357809 17.932326406916115 12.262123211754433 26.007818145548555 2 15.670964563158735 21.145597903404987 36.34776107376522 26.83567645967106 3 18.06160068794524 25.644981685175228 28.374967141632446 27.91845048524709 4 12.117257303483587 16.423393339286374 35.286300783582284 36.173048573647755 5 14.172755096514436 36.972565409616706 32.548739361484316 16.305940132384546 6 33.79887640894699 35.39457120325691 16.91964857728222 13.886903810513884 7 29.66796647962041 30.76752369780934 21.08021853765759 18.48429128491266 8 28.68329592784329 31.671067701074872 19.634910088121963 20.010726282959872 9 28.01948193482508 14.043558266810566 18.292781195467953 39.6441786028964 10 16.302082094934654 26.437268997366008 30.693397584759307 26.567251322940034 11 37.47506611607367 21.292281922636928 21.686600563803 19.5460513974864 12 25.322145798135615 24.020881520356443 28.056901086214207 22.600071595293734 13 30.161881551051138 19.276915862542683 25.03054680430892 25.530655782097263 14 24.59258926578225 19.562319939448138 24.936429791410458 30.90866100335915 15 25.591351545565143 26.1984552934665 23.290935581748315 24.919257579220037 16 25.857652928456602 25.357677365835485 23.868978662865885 24.915691042842028 17 24.02458532409909 25.18001101663459 25.418440578201597 25.37696308106473 18 25.435612790392014 23.607828943631553 26.96710992989775 23.989448336078688 19 25.498357411857015 24.97869985218688 26.00678698663341 23.51615574932269 20 26.028450392781334 23.009311301825406 26.13782417504032 24.82441413035294 21 27.5113733032511 23.721593160695132 24.400689002900787 24.36634453315298 22 25.775094216002653 23.85775067797215 25.306821198963853 25.060333907061345 23 24.128971409549877 23.378016369102657 26.008406469441347 26.48460575190612 24 24.57554914753176 25.100094182979166 25.577613775812807 24.746742893676267 25 25.207750744019116 23.572956143491005 25.686062900492313 25.533230211997566 26 24.44213426820618 24.640671459915435 26.282202851379786 24.634991420498604 27 25.674174445898945 24.206214491497775 25.291894583752182 24.8277164788511 28 24.408450313524966 23.84969294763664 26.460001294520612 25.28185544431778 29 24.198156761162267 24.33976146476328 26.76579876545004 24.696283008624416 30 24.567359323256326 24.328401385929617 26.779932817022157 24.3243064737919 31 24.74093076031951 24.41188475596305 25.18463430453201 25.662550179185427 32 24.400524677129386 24.61346010829061 25.21329868949602 25.77271652508398 33 24.081517812207327 23.996977690654486 25.915642168084258 26.00586232905393 34 24.762329978587573 24.295509994887965 26.272559993765164 24.6696000327593 35 26.032941586738822 24.02762348471739 25.935324165133277 24.00411076341051 36 24.53248652311578 25.160196925645646 25.376434705305023 24.930881845933552 37 25.734013000685568 24.95941413695764 25.354771299157107 23.951801563199684 38 24.506364294432498 24.654309702576892 25.547926386591918 25.291399616398692 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 281.0 1 234.0 2 187.0 3 187.0 4 669.0 5 1151.0 6 1151.0 7 1338.5 8 1526.0 9 1524.0 10 1522.0 11 1522.0 12 1860.0 13 2198.0 14 2594.5 15 2991.0 16 2991.0 17 4458.5 18 5926.0 19 5926.0 20 6534.0 21 7142.0 22 6506.5 23 5871.0 24 5871.0 25 6008.5 26 6146.0 27 6146.0 28 8068.5 29 9991.0 30 12368.5 31 14746.0 32 14746.0 33 18565.0 34 22384.0 35 22384.0 36 24721.0 37 27058.0 38 31757.5 39 36457.0 40 36457.0 41 39684.0 42 42911.0 43 50127.5 44 57344.0 45 57344.0 46 63480.0 47 69616.0 48 69616.0 49 72294.0 50 74972.0 51 72983.0 52 70994.0 53 70994.0 54 67486.5 55 63979.0 56 63979.0 57 62997.5 58 62016.0 59 55738.5 60 49461.0 61 49461.0 62 47065.0 63 44669.0 64 36411.5 65 28154.0 66 28154.0 67 23433.5 68 18713.0 69 18713.0 70 15085.0 71 11457.0 72 8949.0 73 6441.0 74 6441.0 75 4776.0 76 3111.0 77 3111.0 78 3196.5 79 3282.0 80 2493.0 81 1704.0 82 1704.0 83 1721.5 84 1739.0 85 1739.0 86 1100.5 87 462.0 88 397.5 89 333.0 90 333.0 91 196.0 92 59.0 93 41.5 94 24.0 95 24.0 96 17.0 97 10.0 98 10.0 99 9.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01056751519410544 2 0.0 3 0.0 4 1.32093939926318E-4 5 0.0 6 0.0 7 6.6046969963159E-4 8 0.002377690918673724 9 0.0036986303179369043 10 0.001453033339189498 11 0.00462328789742113 12 5.28375759705272E-4 13 2.64187879852636E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.32093939926318E-4 22 0.0 23 1.32093939926318E-4 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.32093939926318E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 757037.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.9297987406303 #Duplication Level Percentage of deduplicated Percentage of total 1 77.86279694825166 39.6553657795702 2 13.743922834071409 13.9995044769202 3 3.9344003159281904 6.01134648765885 4 1.5728651820986126 3.2042282868170866 5 0.7969071143550983 2.0293159474540805 6 0.45388018128580965 1.386961577114825 7 0.27645327129715896 0.9855796627847222 8 0.21262579245127897 0.8663191053288534 9 0.14135240738907714 0.6479144693846354 >10 0.7645742132404069 7.473212124434974 >50 0.10578102913940765 3.8769408155289375 >100 0.11958970177486873 12.823998548877825 >500 0.011985024578685124 4.1344965158877836 >1k 0.002865984138381225 2.9048162022369692 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4691 0.6196526721943578 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3311 0.4373630350960389 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2596 0.34291586804872154 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2496 0.32970647405608977 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2075 0.2740949253471099 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1433 0.18929061591441368 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1150 0.1519080309152657 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1063 0.14041585814167604 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1056 0.13949120056219183 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1019 0.13460372478491806 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1001 0.13222603386624432 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 964 0.12733855808897057 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 961 0.1269422762691916 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 961 0.1269422762691916 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 947 0.12509296111022317 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 933 0.12324364595125469 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 918 0.12126223685235993 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 889 0.11743151259449672 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 852 0.11254403681722294 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 847 0.11188356711759136 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 789 0.10422211860186491 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 788 0.10409002466193859 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.32093939926318E-4 2 0.0 0.0 0.0 0.0 1.32093939926318E-4 3 0.0 0.0 0.0 0.0 1.32093939926318E-4 4 0.0 0.0 0.0 0.0 1.32093939926318E-4 5 0.0 0.0 0.0 0.0 2.64187879852636E-4 6 0.0 0.0 0.0 0.0 3.96281819778954E-4 7 0.0 0.0 0.0 0.0 3.96281819778954E-4 8 0.0 0.0 0.0 0.0 3.96281819778954E-4 9 0.0 0.0 0.0 0.0 3.96281819778954E-4 10 0.0 0.0 0.0 0.0 3.96281819778954E-4 11 0.0 0.0 0.0 0.0 3.96281819778954E-4 12 0.0 0.0 0.0 0.0 6.6046969963159E-4 13 0.0 0.0 0.0 0.0 6.6046969963159E-4 14 0.0 0.0 0.0 0.0 6.6046969963159E-4 15 0.0 0.0 0.0 0.0 0.001188845459336862 16 0.0 0.0 0.0 2.64187879852636E-4 0.00132093939926318 17 0.0 0.0 0.0 2.64187879852636E-4 0.00132093939926318 18 0.0 0.0 0.0 2.64187879852636E-4 0.00132093939926318 19 0.0 0.0 0.0 2.64187879852636E-4 0.00132093939926318 20 0.0 0.0 0.0 2.64187879852636E-4 0.001453033339189498 21 0.0 0.0 0.0 5.28375759705272E-4 0.001585127279115816 22 0.0 0.0 0.0 0.001453033339189498 0.001585127279115816 23 0.0 0.0 0.0 0.002773972738452678 0.001585127279115816 24 0.0 0.0 0.0 0.004755381837347448 0.001849315158968452 25 0.0 0.0 0.0 0.005812133356757992 0.001849315158968452 26 0.0 0.0 0.0 0.007397260635873808 0.00198140909889477 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTAGGCT 45 0.008845249 17.778584 4 CTTATAT 45 0.008845249 17.778584 3 GTTAGGA 45 0.008848616 17.77741 2 AAGACGG 300 0.0 17.6008 5 ACCGTCG 220 0.0 17.455338 8 CAAGACG 335 0.0 17.19481 4 GTTATAT 75 3.2264164E-5 17.069696 1 CGCAAGA 325 0.0 16.738115 2 TACCGTC 240 0.0 16.667425 7 TCTAGCG 215 0.0 16.371754 28 CGTCGTA 225 0.0 16.355219 10 ATACCGT 235 0.0 16.341167 6 GCGCAAG 345 0.0 16.234766 1 GATTATA 90 8.558618E-6 16.00284 1 TAATACT 130 4.78758E-9 16.000727 4 AGAACCG 110 2.0154584E-7 16.000727 5 CCGTCGT 240 0.0 16.000727 9 CCTATTC 190 0.0 16.000727 3 TAACCCG 80 5.6177836E-5 15.99967 28 CTAGCGG 220 0.0 15.99967 29 >>END_MODULE