##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062846_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1371553 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21794199713755 32.0 32.0 32.0 32.0 32.0 2 30.897835519298198 32.0 32.0 32.0 32.0 32.0 3 30.949414277100484 32.0 32.0 32.0 32.0 32.0 4 30.999131641285462 32.0 32.0 32.0 32.0 32.0 5 30.96815070216025 32.0 32.0 32.0 32.0 32.0 6 34.59024478091623 36.0 36.0 36.0 32.0 36.0 7 34.50675620993137 36.0 36.0 36.0 32.0 36.0 8 34.4975527741181 36.0 36.0 36.0 32.0 36.0 9 34.58860722115733 36.0 36.0 36.0 32.0 36.0 10 34.382475194177694 36.0 36.0 36.0 32.0 36.0 11 34.59153893433211 36.0 36.0 36.0 32.0 36.0 12 34.43913505347588 36.0 36.0 36.0 32.0 36.0 13 34.505590378206314 36.0 36.0 36.0 32.0 36.0 14 34.41487642110804 36.0 36.0 36.0 32.0 36.0 15 34.38344781426602 36.0 36.0 36.0 32.0 36.0 16 34.39348971567267 36.0 36.0 36.0 32.0 36.0 17 34.320868387878555 36.0 36.0 36.0 32.0 36.0 18 34.35587542005303 36.0 36.0 36.0 32.0 36.0 19 34.3360643008327 36.0 36.0 36.0 32.0 36.0 20 34.30829286217886 36.0 36.0 36.0 32.0 36.0 21 34.289559353521156 36.0 36.0 36.0 32.0 36.0 22 34.26709795392522 36.0 36.0 36.0 32.0 36.0 23 34.229104526037275 36.0 36.0 36.0 32.0 36.0 24 34.2203298013274 36.0 36.0 36.0 32.0 36.0 25 34.192676476957146 36.0 36.0 36.0 32.0 36.0 26 34.14997889254006 36.0 36.0 36.0 32.0 36.0 27 34.15915826803631 36.0 36.0 36.0 32.0 36.0 28 34.140728794293764 36.0 36.0 36.0 32.0 36.0 29 34.10762106896343 36.0 36.0 36.0 32.0 36.0 30 34.085379857723325 36.0 36.0 36.0 32.0 36.0 31 34.099622836303084 36.0 36.0 36.0 32.0 36.0 32 34.045260372730766 36.0 36.0 36.0 32.0 36.0 33 34.02137722712867 36.0 36.0 36.0 32.0 36.0 34 34.02355577947043 36.0 36.0 36.0 32.0 36.0 35 33.96765710111093 36.0 36.0 36.0 32.0 36.0 36 33.93632327733599 36.0 36.0 36.0 32.0 36.0 37 33.933554153576274 36.0 36.0 36.0 32.0 36.0 38 33.345123374743814 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 6.0 9 4.0 10 14.0 11 19.0 12 5.0 13 12.0 14 247.0 15 473.0 16 591.0 17 730.0 18 876.0 19 1065.0 20 1473.0 21 1894.0 22 2791.0 23 3894.0 24 5726.0 25 8790.0 26 12542.0 27 17958.0 28 25411.0 29 34088.0 30 46034.0 31 61811.0 32 84995.0 33 126550.0 34 286603.0 35 646948.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.32395369649862 17.463964996445043 11.588795825735556 25.623285481320778 2 16.575969210523628 19.93817010952265 37.75679173189346 25.72906894806027 3 18.791157428371218 24.25567535917387 28.541261518246536 28.41190569420837 4 12.6132497670478 15.607287065648045 36.23824849109678 35.541214676207375 5 14.68513725347235 36.53144252852612 33.35751522000656 15.42590499799497 6 33.63143888301557 35.60285808027414 17.188655171156718 13.57704786555357 7 30.097874524626118 30.653959893609574 20.972154172791114 18.27601140897319 8 28.095740135584222 32.518632258779505 19.772286164663814 19.61334144097245 9 27.78646625093234 14.484863464593682 18.789995836823913 38.938674447650065 10 16.130847962809852 26.401812261491774 31.308319225166347 26.159020550532023 11 37.04008043648019 21.334843097096133 22.591043348350766 19.03403311807291 12 25.344547250840314 23.789983303074713 28.47481972424554 22.39064972183943 13 29.459935217310772 19.62301491810284 25.247456163762237 25.66959370082415 14 23.80735018641249 20.051683618669976 25.268097834290128 30.872868360627407 15 25.039799946471536 27.278733811102857 22.634300662250688 25.047165580174923 16 25.576124905571223 25.820327197528957 24.005909272541135 24.597638624358687 17 23.8319048532347 25.97539071416226 25.409784061647915 24.78292037095512 18 24.862118145281247 24.625947163031622 26.646707460057286 23.86522723162985 19 25.548620428163098 24.979291839234673 25.79274339380505 23.679344338797176 20 25.839154949911375 24.171381197825106 25.3400550796263 24.649408772637223 21 26.883837323253534 24.177151873629192 24.648986186942928 24.290024616174342 22 25.81300457324187 24.368918871622565 25.158226002146623 24.659850552988942 23 24.048519230138215 24.306792619301962 25.871745605815892 25.77294254474393 24 24.645696105519303 25.07235565511674 25.59053079773158 24.691417441632378 25 24.696386093921596 24.613472917216626 25.62921402392158 25.060926964940194 26 24.373416175339187 25.49841936577735 26.01253568732977 24.115628771553688 27 25.19913549963979 24.904770793654496 25.102520876050367 24.793572830655346 28 24.259932641274318 24.91106212854448 25.900516455784807 24.928488774396392 29 24.379811243571336 25.21574715417928 25.729165223491083 24.675276378758305 30 24.190136762967764 25.29229010344171 26.047960731959314 24.46961240163121 31 24.98166195880904 25.165698602808966 24.717492085111843 25.13514735327015 32 24.450875565822017 25.17412151756965 24.791535419291613 25.583467497316718 33 24.062092806710655 24.810070648833225 25.71649612703811 25.41134041741801 34 25.003226679131007 24.92892190998987 25.57440357479588 24.49344783608324 35 25.570045043566907 24.865624036069857 25.5467101861757 24.017620734187535 36 24.344549078059075 25.545777652029468 25.191964682873614 24.917708587037847 37 25.230017398050776 25.308038832799333 24.989025957075086 24.4729178120748 38 24.370162104145642 25.30500253743445 25.5324237457199 24.792411612700004 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 756.0 1 567.0 2 378.0 3 378.0 4 809.5 5 1241.0 6 1241.0 7 1434.0 8 1627.0 9 1526.0 10 1425.0 11 1425.0 12 1844.5 13 2264.0 14 2943.5 15 3623.0 16 3623.0 17 5228.5 18 6834.0 19 6834.0 20 8434.5 21 10035.0 22 10361.0 23 10687.0 24 10687.0 25 12428.0 26 14169.0 27 14169.0 28 18377.5 29 22586.0 30 27701.0 31 32816.0 32 32816.0 33 41591.5 34 50367.0 35 50367.0 36 55517.0 37 60667.0 38 68328.0 39 75989.0 40 75989.0 41 81218.0 42 86447.0 43 96372.0 44 106297.0 45 106297.0 46 109545.5 47 112794.0 48 112794.0 49 119475.5 50 126157.0 51 127318.0 52 128479.0 53 128479.0 54 122245.5 55 116012.0 56 116012.0 57 111730.0 58 107448.0 59 95858.0 60 84268.0 61 84268.0 62 79526.0 63 74784.0 64 61774.0 65 48764.0 66 48764.0 67 40548.0 68 32332.0 69 32332.0 70 26226.5 71 20121.0 72 15585.0 73 11049.0 74 11049.0 75 8498.0 76 5947.0 77 5947.0 78 5841.0 79 5735.0 80 4435.5 81 3136.0 82 3136.0 83 3196.0 84 3256.0 85 3256.0 86 2130.5 87 1005.0 88 869.0 89 733.0 90 733.0 91 526.5 92 320.0 93 280.0 94 240.0 95 240.0 96 204.5 97 169.0 98 169.0 99 382.5 100 596.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11920793436345516 2 0.05067248586091824 3 0.01035322732697898 4 0.001968571393157975 5 2.1873015479533054E-4 6 2.1873015479533054E-4 7 7.291005159844351E-5 8 5.103703611891046E-4 9 2.9164020639377405E-4 10 5.103703611891046E-4 11 0.0026247618575439666 12 0.0031351322187330713 13 0.014509100268090259 14 0.009624126810994544 15 0.023331216511501926 16 0.010863597688168084 17 0.020560634550761073 18 0.006488994592261473 19 0.008238835830624118 20 0.006124444334269255 21 0.007072275005049021 22 0.007072275005049021 23 0.010061587120585205 24 0.01472783042288559 25 0.017425502332028 26 0.01953989382838286 27 0.00911375644980544 28 0.006561904643859916 29 0.011373968049357188 30 0.0040829628895128365 31 0.006343174489064587 32 0.007072275005049021 33 0.008895026295010109 34 0.012686348978129173 35 0.015602751042066912 36 0.01509238068087781 37 0.009842856965789874 38 0.006488994592261473 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1371553.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.258421383793745 #Duplication Level Percentage of deduplicated Percentage of total 1 81.30757692094458 47.368510779556125 2 11.96789901799692 13.944618081383117 3 3.222176742429503 5.631567913005534 4 1.2628675053610774 2.9429066911690422 5 0.6143642119205878 1.789594457059598 6 0.3614465970514877 1.2634384895258322 7 0.2340508951821702 0.9544804973743909 8 0.155535046428229 0.7248981019810952 9 0.11785319065026384 0.6179346758094888 >10 0.6075196861217583 6.462652002647712 >50 0.06273632980849587 2.5914800642340046 >100 0.07379948781151792 9.334673438828814 >500 0.008785626603522789 3.484803862658945 >1k 0.0033887416899302187 2.8884409447662835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4345 0.3167941741952371 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2700 0.1968571393157975 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1588 0.11578116193832831 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1557 0.11352095033877656 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1527 0.11133364879082325 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1526 0.1112607387392248 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1515 0.11045872817164193 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1507 0.10987544775885438 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1499 0.10929216734606682 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1478 0.10776105626249952 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1473 0.1073965060045073 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1422 0.10367809337298668 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1388 0.1011991516186396 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.291005159844351E-5 2 0.0 0.0 0.0 0.0 7.291005159844351E-5 3 0.0 0.0 0.0 0.0 7.291005159844351E-5 4 0.0 0.0 0.0 0.0 7.291005159844351E-5 5 0.0 0.0 0.0 0.0 7.291005159844351E-5 6 0.0 0.0 0.0 0.0 7.291005159844351E-5 7 0.0 0.0 0.0 0.0 7.291005159844351E-5 8 0.0 0.0 0.0 0.0 1.4582010319688703E-4 9 0.0 0.0 0.0 0.0 1.4582010319688703E-4 10 0.0 0.0 0.0 2.1873015479533054E-4 1.4582010319688703E-4 11 0.0 0.0 0.0 2.1873015479533054E-4 1.4582010319688703E-4 12 0.0 0.0 0.0 2.1873015479533054E-4 2.1873015479533054E-4 13 0.0 0.0 0.0 2.1873015479533054E-4 2.1873015479533054E-4 14 0.0 0.0 0.0 2.1873015479533054E-4 2.1873015479533054E-4 15 0.0 0.0 0.0 2.1873015479533054E-4 2.1873015479533054E-4 16 0.0 0.0 0.0 2.9164020639377405E-4 3.645502579922176E-4 17 0.0 0.0 0.0 2.9164020639377405E-4 3.645502579922176E-4 18 0.0 7.291005159844351E-5 0.0 3.645502579922176E-4 3.645502579922176E-4 19 0.0 7.291005159844351E-5 0.0 4.374603095906611E-4 3.645502579922176E-4 20 0.0 7.291005159844351E-5 0.0 5.103703611891046E-4 3.645502579922176E-4 21 0.0 7.291005159844351E-5 0.0 8.749206191813222E-4 4.374603095906611E-4 22 0.0 7.291005159844351E-5 0.0 0.0013123809287719833 4.374603095906611E-4 23 0.0 7.291005159844351E-5 0.0 0.0023331216511501924 5.832804127875481E-4 24 0.0 7.291005159844351E-5 0.0 0.0033538623735284018 5.832804127875481E-4 25 0.0 7.291005159844351E-5 0.0 0.003645502579922176 5.832804127875481E-4 26 0.0 7.291005159844351E-5 0.0 0.004666243302300385 5.832804127875481E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACACGA 55 0.0013637757 17.456554 2 GAGCGTT 55 0.0013664442 17.451464 7 TAGTACT 95 7.712224E-7 16.838516 4 TAATACT 235 0.0 16.336945 4 ATCGTTT 250 0.0 15.999508 29 CTTATAC 145 1.2223609E-9 15.446674 3 CTAGCGG 345 0.0 15.303876 29 TAGCGGC 350 0.0 15.085251 30 TCTTATA 160 3.0377123E-10 15.001727 2 GTAATAC 110 3.5472367E-6 14.543946 3 GTATTAG 245 0.0 14.382113 1 CATCGTT 295 0.0 14.101261 28 TCTAGCG 365 0.0 14.026966 28 TCTATAG 80 0.0010189197 13.9985485 3 TCTATAC 80 0.0010189197 13.9985485 3 GTCTTAA 185 1.7826096E-10 13.852059 1 CGGCATC 335 0.0 13.850825 25 TGTAATA 140 2.0533116E-7 13.715864 2 TTAGTAC 105 3.6873826E-5 13.712865 3 TTTCGTT 480 0.0 13.666246 28 >>END_MODULE