##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062845_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2021279 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.224176375453364 32.0 32.0 32.0 32.0 32.0 2 30.798746734122307 32.0 32.0 32.0 32.0 32.0 3 30.840840378789864 32.0 32.0 32.0 32.0 32.0 4 30.926851760692116 32.0 32.0 32.0 32.0 32.0 5 30.813854495099392 32.0 32.0 32.0 32.0 32.0 6 34.46066723099582 36.0 36.0 36.0 32.0 36.0 7 34.38959144185439 36.0 36.0 36.0 32.0 36.0 8 34.376811909686886 36.0 36.0 36.0 32.0 36.0 9 34.532775039962324 36.0 36.0 36.0 32.0 36.0 10 34.228039770857954 36.0 36.0 36.0 32.0 36.0 11 34.500872467383275 36.0 36.0 36.0 32.0 36.0 12 34.313236816886736 36.0 36.0 36.0 32.0 36.0 13 34.40700417903714 36.0 36.0 36.0 32.0 36.0 14 34.29497263861149 36.0 36.0 36.0 32.0 36.0 15 34.23904814723747 36.0 36.0 36.0 32.0 36.0 16 34.2543943710888 36.0 36.0 36.0 32.0 36.0 17 34.17731545224583 36.0 36.0 36.0 32.0 36.0 18 34.20218633845204 36.0 36.0 36.0 32.0 36.0 19 34.19221591873264 36.0 36.0 36.0 32.0 36.0 20 34.18179034165991 36.0 36.0 36.0 32.0 36.0 21 34.16854476794148 36.0 36.0 36.0 32.0 36.0 22 34.145364890250185 36.0 36.0 36.0 32.0 36.0 23 34.081651271299016 36.0 36.0 36.0 32.0 36.0 24 34.07042867412168 36.0 36.0 36.0 32.0 36.0 25 34.03848949105987 36.0 36.0 36.0 32.0 36.0 26 33.98901190780689 36.0 36.0 36.0 32.0 36.0 27 33.99540291073127 36.0 36.0 36.0 32.0 36.0 28 33.98039756015869 36.0 36.0 36.0 32.0 36.0 29 33.9474797887872 36.0 36.0 36.0 32.0 36.0 30 33.92485203675495 36.0 36.0 36.0 32.0 36.0 31 33.9476984622113 36.0 36.0 36.0 32.0 36.0 32 33.9012170017103 36.0 36.0 36.0 32.0 36.0 33 33.86215905869501 36.0 36.0 36.0 32.0 36.0 34 33.881576961913716 36.0 36.0 36.0 32.0 36.0 35 33.83611812124897 36.0 36.0 36.0 32.0 36.0 36 33.78687454824396 36.0 36.0 36.0 32.0 36.0 37 33.802875802895095 36.0 36.0 36.0 32.0 36.0 38 33.20390901008718 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 8.0 8 2.0 9 7.0 10 12.0 11 18.0 12 12.0 13 3.0 14 163.0 15 478.0 16 602.0 17 753.0 18 927.0 19 1186.0 20 1750.0 21 2603.0 22 3887.0 23 6058.0 24 9244.0 25 14152.0 26 20970.0 27 30200.0 28 41580.0 29 55758.0 30 75684.0 31 100644.0 32 137910.0 33 204648.0 34 444960.0 35 867058.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.18562180207936 17.33432727885125 11.57423138457271 25.905819534496676 2 17.052020689276237 19.305734101516848 37.15654618382448 26.48569902538243 3 18.9179761371092 23.307633769839974 28.36194722930601 29.412442863744815 4 12.888131152212717 15.12999054038543 35.749130229999246 36.232748077402604 5 15.150281307451333 35.93398427527957 33.266708752293106 15.649025664975985 6 34.687348022755955 35.05716447011364 16.65237699212328 13.603110515007128 7 30.818323852532902 30.122180125643283 20.621359357792446 18.438136664031372 8 28.372027671725043 32.37228691480451 19.347202178433452 19.908483235037 9 27.38351265119818 14.508890693034235 18.63955897056852 39.468037685199064 10 16.307280228410963 25.83817393924312 30.927353063842567 26.92719276850335 11 37.690903756652474 21.13068159610853 22.118688469113774 19.05972617812522 12 25.39790127793472 23.334405287869266 27.994340080050268 23.273353354145744 13 29.21313511413932 19.085846328170035 25.328217041605743 26.3728015160849 14 23.874615372055636 19.718283378085992 24.62786519678058 31.779236053077792 15 25.31223881128796 26.97375160146258 22.084521595064153 25.629487992185307 16 26.30908898391044 25.55028000130624 23.242186533614507 24.89844448116881 17 24.48849924314663 25.75256065837089 24.786787057238303 24.97215304124418 18 25.473932007900352 24.409205333924408 25.820858747580615 24.296003910594624 19 25.823286595614253 24.77259087335495 25.141195277707546 24.26292725332325 20 25.958739719439595 24.083884128442502 24.616793548683955 25.340582603433955 21 27.225661661132722 23.940869687402746 24.249355445354976 24.58411320610955 22 26.13120173841883 23.958326633342356 24.70033104964656 25.210140578592256 23 24.53062549292611 23.804830453209995 25.505048256043512 26.159495797820387 24 25.092058113632515 24.799283129293034 24.911504468566644 25.1971542885078 25 25.127130993539165 24.27411505596139 25.01634134888248 25.582412601616966 26 24.95180365183829 25.182542431589887 25.405710327081994 24.459943589489832 27 25.66040181721206 24.478729099439022 24.510394741920067 25.350474341428853 28 24.789948811928117 24.390626437901933 25.504929313359465 25.314495436810486 29 24.79728579684445 24.67739892492697 25.374949531733655 25.15036574649493 30 24.57025954621466 24.877450252817603 25.63164821246574 24.920641988501995 31 25.50051331527453 24.693655917968506 24.279243509344813 25.526587257412146 32 25.010612727951003 24.55394382824104 24.3517330164193 26.083710427388656 33 24.53861183526633 24.29612360220451 25.169496850522656 25.995767712006508 34 25.518717572420563 24.324680041285635 25.24732291560492 24.909279470688883 35 26.184533717572407 24.239125486648945 25.140774402710786 24.435566393067862 36 24.778054759192752 24.976422493090034 24.708188148999948 25.537334598717266 37 25.986888328138143 24.65083370441839 24.501706991242393 24.86057097620108 38 24.867984814728505 24.468958310759763 25.23589071472994 25.427166159781788 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 104.0 1 162.5 2 221.0 3 221.0 4 502.0 5 783.0 6 783.0 7 934.0 8 1085.0 9 1101.0 10 1117.0 11 1117.0 12 1470.0 13 1823.0 14 2687.5 15 3552.0 16 3552.0 17 5326.0 18 7100.0 19 7100.0 20 8961.5 21 10823.0 22 12152.0 23 13481.0 24 13481.0 25 16277.5 26 19074.0 27 19074.0 28 24315.5 29 29557.0 30 36125.5 31 42694.0 32 42694.0 33 55318.0 34 67942.0 35 67942.0 36 76395.5 37 84849.0 38 96295.0 39 107741.0 40 107741.0 41 115131.5 42 122522.0 43 139451.5 44 156381.0 45 156381.0 46 160022.0 47 163663.0 48 163663.0 49 175153.0 50 186643.0 51 189766.0 52 192889.0 53 192889.0 54 184529.5 55 176170.0 56 176170.0 57 170465.0 58 164760.0 59 147682.0 60 130604.0 61 130604.0 62 123953.5 63 117303.0 64 97784.5 65 78266.0 66 78266.0 67 65750.5 68 53235.0 69 53235.0 70 43083.0 71 32931.0 72 25937.5 73 18944.0 74 18944.0 75 14368.5 76 9793.0 77 9793.0 78 9431.5 79 9070.0 80 7186.5 81 5303.0 82 5303.0 83 5312.0 84 5321.0 85 5321.0 86 3604.0 87 1887.0 88 1585.0 89 1283.0 90 1283.0 91 945.0 92 607.0 93 533.0 94 459.0 95 459.0 96 417.0 97 375.0 98 375.0 99 649.5 100 924.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11819249099208967 2 0.054519935149971874 3 0.011527354709567556 4 0.0027210493949622987 5 1.4842087608885266E-4 6 2.968417521777053E-4 7 4.947362536295089E-5 8 4.947362536295088E-4 9 3.957890029036071E-4 10 4.947362536295088E-4 11 0.0018799977637921337 12 0.002424207642784593 13 0.014050509603078052 14 0.00841051631170165 15 0.023252603920586916 16 0.010735776703760342 17 0.020383133649535763 18 0.005095783412383941 19 0.007025254801539026 20 0.005442098789924597 21 0.005738940542102302 22 0.006530518547909516 23 0.009152620692145914 24 0.013506299724085593 25 0.016425243620499692 26 0.018750504012558386 27 0.007965253683435094 28 0.005194730663109843 29 0.010241040450130834 30 0.002918943896414102 31 0.005145257037746892 32 0.005986308668917057 33 0.007421043804442633 34 0.01172524921101936 35 0.015584191989329529 36 0.014099983228441 37 0.008855778939968209 38 0.005442098789924597 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2021279.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.99196294293503 #Duplication Level Percentage of deduplicated Percentage of total 1 81.72513746742189 44.94225731114735 2 11.169004478618204 12.284109607952955 3 3.1189324838769634 5.145486587246349 4 1.2887136704710176 2.83475577642384 5 0.6710167765215211 1.8450264854279605 6 0.4234080205578913 1.3970422905756619 7 0.3048292307852798 1.1734210434287249 8 0.20856392891817083 0.917547188024079 9 0.1512608522792581 0.7486318064931958 >10 0.7842542964000968 7.666994667105074 >50 0.06407523519487099 2.4787166713779047 >100 0.07264464962104843 8.777453666040422 >500 0.012467310885826227 4.761803270998957 >1k 0.005691598447877191 5.026753627757515 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3899 0.1928976652901455 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2788 0.13793246751190705 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2708 0.133974577482871 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2467 0.12205143377039983 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2442 0.12081459313632605 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2436 0.12051775138414834 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2416 0.11952827887688933 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2358 0.11665880860583819 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2331 0.1153230207210385 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2300 0.11378933833478705 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2157 0.10671460990788505 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2110 0.10438934951582637 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2055 0.10166830012086406 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2027 0.10028303861070144 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4842087608885266E-4 2 0.0 0.0 0.0 0.0 1.4842087608885266E-4 3 0.0 0.0 0.0 0.0 1.4842087608885266E-4 4 0.0 0.0 0.0 0.0 1.4842087608885266E-4 5 0.0 0.0 0.0 0.0 1.4842087608885266E-4 6 0.0 0.0 0.0 0.0 1.4842087608885266E-4 7 0.0 0.0 0.0 0.0 1.4842087608885266E-4 8 0.0 0.0 0.0 4.947362536295088E-5 1.4842087608885266E-4 9 0.0 0.0 0.0 4.947362536295088E-5 1.4842087608885266E-4 10 0.0 0.0 0.0 4.947362536295088E-5 1.9789450145180353E-4 11 0.0 0.0 0.0 4.947362536295088E-5 1.9789450145180353E-4 12 0.0 0.0 0.0 9.894725072590176E-5 3.4631537754065616E-4 13 0.0 0.0 0.0 9.894725072590176E-5 3.9578900290360706E-4 14 0.0 0.0 0.0 9.894725072590176E-5 3.9578900290360706E-4 15 0.0 0.0 0.0 1.4842087608885266E-4 6.431571297183615E-4 16 0.0 0.0 0.0 2.473681268147544E-4 6.431571297183615E-4 17 0.0 0.0 0.0 2.473681268147544E-4 6.431571297183615E-4 18 0.0 0.0 4.947362536295088E-5 2.473681268147544E-4 6.431571297183615E-4 19 0.0 0.0 4.947362536295088E-5 2.473681268147544E-4 6.431571297183615E-4 20 0.0 0.0 4.947362536295088E-5 3.9578900290360706E-4 6.431571297183615E-4 21 0.0 0.0 9.894725072590176E-5 4.947362536295088E-4 7.421043804442633E-4 22 0.0 0.0 9.894725072590176E-5 6.926307550813123E-4 7.421043804442633E-4 23 0.0 0.0 9.894725072590176E-5 0.0012368406340737721 7.915780058072141E-4 24 0.0 0.0 9.894725072590176E-5 0.0019294713891550846 8.410516311701651E-4 25 0.0 0.0 9.894725072590176E-5 0.002127365890606888 8.410516311701651E-4 26 0.0 0.0 9.894725072590176E-5 0.0024736812681475442 8.905252565331159E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGTT 65 9.452549E-6 19.689188 4 CTAGCGG 640 0.0 17.749382 29 TCTAGCG 645 0.0 17.611355 28 ACGAATT 65 2.1019549E-4 17.23017 21 TAGCGGC 700 0.0 16.456572 30 CGCAAGA 695 0.0 16.120928 2 CAAGACG 725 0.0 16.107792 4 AAGACGG 730 0.0 15.997465 5 GTATCAA 3110 0.0 15.860018 1 GCGCAAG 715 0.0 15.678531 1 GACGGAC 710 0.0 15.323031 7 ACGATTA 95 1.4339335E-5 15.157369 32 AGACGGA 765 0.0 15.0564375 6 TCTAGAT 465 0.0 14.8010435 2 GTACGAA 65 0.0041639935 14.768717 19 TACGTTG 65 0.0041674185 14.766891 5 GTATTAG 430 0.0 14.524779 1 CATCGTT 420 0.0 14.475328 28 ATCGTTT 415 0.0 14.264564 29 GTTATTC 340 0.0 14.116806 3 >>END_MODULE