##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062845_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2021279 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.204347346407893 32.0 32.0 32.0 32.0 32.0 2 31.238102706256782 32.0 32.0 32.0 32.0 32.0 3 31.330884059053698 32.0 32.0 32.0 32.0 32.0 4 31.427759849085653 32.0 32.0 32.0 32.0 32.0 5 31.349742910305803 32.0 32.0 32.0 32.0 32.0 6 34.86005890329836 36.0 36.0 36.0 32.0 36.0 7 34.882380413589615 36.0 36.0 36.0 32.0 36.0 8 34.81312525386154 36.0 36.0 36.0 32.0 36.0 9 34.932531332883784 36.0 36.0 36.0 32.0 36.0 10 34.774062363483715 36.0 36.0 36.0 32.0 36.0 11 34.95917238540548 36.0 36.0 36.0 36.0 36.0 12 34.84994698901043 36.0 36.0 36.0 32.0 36.0 13 34.911497621060725 36.0 36.0 36.0 32.0 36.0 14 34.85062923030418 36.0 36.0 36.0 32.0 36.0 15 34.81201308676338 36.0 36.0 36.0 32.0 36.0 16 34.82826764637638 36.0 36.0 36.0 32.0 36.0 17 34.793166109181364 36.0 36.0 36.0 32.0 36.0 18 34.79688553633615 36.0 36.0 36.0 32.0 36.0 19 34.78923691385504 36.0 36.0 36.0 32.0 36.0 20 34.77951336752621 36.0 36.0 36.0 32.0 36.0 21 34.76984325271276 36.0 36.0 36.0 32.0 36.0 22 34.756353279285044 36.0 36.0 36.0 32.0 36.0 23 34.69992762008609 36.0 36.0 36.0 32.0 36.0 24 34.66915700405535 36.0 36.0 36.0 32.0 36.0 25 34.65356291734095 36.0 36.0 36.0 32.0 36.0 26 34.587625458929715 36.0 36.0 36.0 32.0 36.0 27 34.57000493252045 36.0 36.0 36.0 32.0 36.0 28 34.53593838356803 36.0 36.0 36.0 32.0 36.0 29 34.4993828165236 36.0 36.0 36.0 32.0 36.0 30 34.485899274667176 36.0 36.0 36.0 32.0 36.0 31 34.485058223036006 36.0 36.0 36.0 32.0 36.0 32 34.45868927545381 36.0 36.0 36.0 32.0 36.0 33 34.4219115718315 36.0 36.0 36.0 32.0 36.0 34 34.41885707020159 36.0 36.0 36.0 32.0 36.0 35 34.38552965721209 36.0 36.0 36.0 32.0 36.0 36 34.36040051868149 36.0 36.0 36.0 32.0 36.0 37 34.36052816063493 36.0 36.0 36.0 32.0 36.0 38 33.91941043270128 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 15.0 21 42.0 22 143.0 23 500.0 24 1378.0 25 3582.0 26 7513.0 27 14528.0 28 25039.0 29 39398.0 30 59187.0 31 85803.0 32 122063.0 33 195405.0 34 469032.0 35 997648.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.33928585565117 18.732732209723004 12.287492380401998 26.64048955422383 2 15.939667873493898 20.483228927440955 36.355909479052364 27.22119372001278 3 17.86215559554124 24.11982709957408 28.67768378338666 29.340333521498025 4 12.335938787091106 16.09545073822289 35.72990882478517 35.83870164990083 5 14.632467858222443 36.51618603864187 32.862954594590846 15.988391508544836 6 34.589289142106274 35.60815049503383 16.271602690577637 13.530957672282263 7 30.592533114065358 30.44579376046062 20.557065331665076 18.404607793808943 8 28.24508604401373 32.74471572550023 19.115905984119593 19.89429224636645 9 27.45741999163861 14.290110553410235 18.45982203597377 39.79264741897739 10 16.09308055371402 26.16595588890098 30.85095435520418 26.89000920218082 11 37.78847010162381 21.068088938145042 22.044498758151178 19.098942202079975 12 25.17388897326966 23.47776957057995 27.887838334584202 23.46050312156619 13 29.20312476809135 19.1404414056509 25.258129789686684 26.39830403657107 14 23.75972033535219 19.725094717302618 24.56188609384756 31.953298853497635 15 25.326785663928632 27.072363587609626 21.918250770922768 25.682599977538974 16 26.260600342654328 25.654301063831365 23.074202027528116 25.01089656598619 17 24.42404042193087 25.87163870005081 24.656368566635283 25.047952311383042 18 25.51785280508035 24.45189407301021 25.697738906900035 24.332514215009407 19 25.76131251549143 24.891170392607847 25.064080713251364 24.28343637864936 20 26.02485851779987 24.021671426853988 24.593883377801877 25.359586677544264 21 27.14920955949652 24.103265359836698 24.147593750092764 24.599931330574023 22 26.0528605897553 24.076389256505408 24.696788518556815 25.173961635182472 23 24.353750448973372 23.827697130231467 25.496740181212086 26.321812239583075 24 24.98808922469387 24.850700967060956 24.84842518029426 25.31278462795092 25 25.07137814361911 24.286428826924762 25.028682362684577 25.61351066677155 26 24.938974252923153 25.168383567228258 25.367960270680236 24.524681909168358 27 25.80278417911836 24.416087247770964 24.455567220342772 25.3255613527679 28 24.710542186407718 24.462382481587152 25.469022336847114 25.358052995158015 29 24.77248316536213 24.64528647455398 25.394564530675872 25.18766582940801 30 24.678631698048612 24.736070577095 25.632829510423843 24.952468214432542 31 25.496925461551818 24.51462662997043 24.39455414121455 25.593893767263204 32 24.983982913788743 24.56662341022689 24.30708477157285 26.142308904411514 33 24.578447606688634 24.246133265125692 25.192563718318944 25.982855409866723 34 25.565298011803417 24.228421707245758 25.23986050416593 24.9664197767849 35 26.17629728503586 24.230598546761726 25.037859691809 24.555244476393412 36 24.860942007511085 24.901312485807253 24.71821059833897 25.51953490834269 37 26.010610113695336 24.6090717807883 24.527687667066246 24.85263043845011 38 24.90609891969231 24.29405979193341 25.24781375725037 25.552027531123905 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 70.0 1 83.5 2 97.0 3 97.0 4 393.5 5 690.0 6 690.0 7 847.0 8 1004.0 9 1044.5 10 1085.0 11 1085.0 12 1437.0 13 1789.0 14 2675.5 15 3562.0 16 3562.0 17 5473.0 18 7384.0 19 7384.0 20 9234.5 21 11085.0 22 12398.5 23 13712.0 24 13712.0 25 16273.0 26 18834.0 27 18834.0 28 24015.5 29 29197.0 30 36225.0 31 43253.0 32 43253.0 33 56243.0 34 69233.0 35 69233.0 36 76954.0 37 84675.0 38 96150.5 39 107626.0 40 107626.0 41 115723.0 42 123820.0 43 140742.5 44 157665.0 45 157665.0 46 160660.5 47 163656.0 48 163656.0 49 175201.0 50 186746.0 51 189467.0 52 192188.0 53 192188.0 54 184170.5 55 176153.0 56 176153.0 57 170652.5 58 165152.0 59 148006.0 60 130860.0 61 130860.0 62 124307.0 63 117754.0 64 98119.5 65 78485.0 66 78485.0 67 65764.5 68 53044.0 69 53044.0 70 42986.0 71 32928.0 72 25847.5 73 18767.0 74 18767.0 75 14069.5 76 9372.0 77 9372.0 78 9276.5 79 9181.0 80 7145.5 81 5110.0 82 5110.0 83 4874.5 84 4639.0 85 4639.0 86 2976.5 87 1314.0 88 1079.0 89 844.0 90 844.0 91 516.0 92 188.0 93 126.0 94 64.0 95 64.0 96 44.5 97 25.0 98 25.0 99 26.5 100 28.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008657884438516405 2 4.947362536295089E-5 3 0.0 4 2.968417521777053E-4 5 0.0 6 1.4842087608885266E-4 7 3.957890029036071E-4 8 0.0022757867666957404 9 0.004155784530487874 10 9.399988818960669E-4 11 0.004897888910932137 12 8.905252565331159E-4 13 4.4526262826655795E-4 14 4.947362536295089E-5 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 4.947362536295089E-5 22 0.0 23 4.947362536295089E-5 24 0.0 25 9.894725072590178E-5 26 4.947362536295089E-5 27 4.947362536295089E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.4842087608885266E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2021279.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.04294795377245 #Duplication Level Percentage of deduplicated Percentage of total 1 80.4122255098718 42.653014925671435 2 11.93350536624705 12.659766080958132 3 3.35430589473569 5.33766818986492 4 1.3683887897556468 2.9033350142213776 5 0.753700366757114 1.9989244663318404 6 0.4735793947980604 1.5072028314151542 7 0.3014600333784323 1.1193230202444282 8 0.21879758747998376 0.9284535236089402 9 0.16262621874018876 0.776355665089918 >10 0.85682026925237 8.0404538088249 >50 0.06872605421644133 2.5830376819908825 >100 0.0761678313394025 8.999489879116851 >500 0.012474566171055636 4.521068712783526 >1k 0.007222117256926948 5.97190619987767 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4387 0.21704079446726554 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2858 0.14139562128731362 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2831 0.14005983340251393 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2782 0.13763562575972935 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2639 0.13056089733282739 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2586 0.12793879518859097 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2494 0.12338722165519951 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2485 0.12294195902693296 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2361 0.11680722948192704 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2329 0.11522407347031262 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2322 0.11487775809277195 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2311 0.11433354821377949 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2240 0.11082092081300997 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4842087608885266E-4 2 0.0 0.0 0.0 0.0 1.4842087608885266E-4 3 0.0 0.0 0.0 0.0 1.4842087608885266E-4 4 0.0 0.0 0.0 0.0 1.4842087608885266E-4 5 0.0 0.0 0.0 0.0 1.4842087608885266E-4 6 0.0 0.0 0.0 0.0 1.9789450145180353E-4 7 0.0 0.0 0.0 4.947362536295088E-5 1.9789450145180353E-4 8 0.0 0.0 0.0 4.947362536295088E-5 1.9789450145180353E-4 9 0.0 0.0 0.0 9.894725072590176E-5 1.9789450145180353E-4 10 0.0 0.0 4.947362536295088E-5 9.894725072590176E-5 1.9789450145180353E-4 11 0.0 0.0 4.947362536295088E-5 9.894725072590176E-5 1.9789450145180353E-4 12 0.0 0.0 4.947362536295088E-5 1.4842087608885266E-4 2.968417521777053E-4 13 0.0 0.0 4.947362536295088E-5 1.4842087608885266E-4 3.4631537754065616E-4 14 0.0 0.0 4.947362536295088E-5 1.4842087608885266E-4 3.9578900290360706E-4 15 0.0 0.0 4.947362536295088E-5 1.4842087608885266E-4 3.9578900290360706E-4 16 0.0 0.0 4.947362536295088E-5 2.968417521777053E-4 3.9578900290360706E-4 17 0.0 0.0 4.947362536295088E-5 2.968417521777053E-4 3.9578900290360706E-4 18 0.0 0.0 4.947362536295088E-5 2.968417521777053E-4 3.9578900290360706E-4 19 0.0 0.0 4.947362536295088E-5 2.968417521777053E-4 3.9578900290360706E-4 20 0.0 0.0 4.947362536295088E-5 4.4526262826655795E-4 3.9578900290360706E-4 21 0.0 0.0 4.947362536295088E-5 5.442098789924597E-4 3.9578900290360706E-4 22 0.0 0.0 4.947362536295088E-5 7.915780058072141E-4 4.4526262826655795E-4 23 0.0 0.0 4.947362536295088E-5 0.0013357878847996738 4.4526262826655795E-4 24 0.0 0.0 4.947362536295088E-5 0.0019789450145180354 4.4526262826655795E-4 25 0.0 0.0 4.947362536295088E-5 0.002127365890606888 4.4526262826655795E-4 26 0.0 0.0 4.947362536295088E-5 0.0023747340174216426 4.947362536295088E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAACG 35 0.002067293 22.856737 14 TCTAGCG 550 0.0 18.908754 28 CTATACG 65 2.1016817E-4 17.230463 2 CTAGCGG 610 0.0 17.048878 29 GTTAGAC 130 4.807589E-9 15.999716 3 TCTATAC 140 7.4396667E-10 15.999716 3 TAGCGGC 655 0.0 15.87758 30 GTATCAA 3055 0.0 15.607696 1 GTTATTC 390 0.0 15.589466 3 AAGACGG 600 0.0 15.467539 5 CAAGACG 610 0.0 14.950924 4 TACCGTC 510 0.0 14.74593 7 ATACCGT 545 0.0 14.6797285 6 ACCGTCC 175 7.4578566E-11 14.629397 8 ACCGTCG 495 0.0 14.546276 8 TCGTTAG 110 3.5460853E-6 14.545196 14 TTCGGAA 640 0.0 14.249747 31 AGCGGCG 765 0.0 14.22197 31 GTTTTCG 630 0.0 14.221969 28 TTAGGAC 305 0.0 14.163683 3 >>END_MODULE