##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062844_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1018343 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.223102628485687 32.0 32.0 32.0 32.0 32.0 2 30.855812825344703 32.0 32.0 32.0 32.0 32.0 3 30.91508263915007 32.0 32.0 32.0 32.0 32.0 4 30.978444394472195 32.0 32.0 32.0 32.0 32.0 5 30.894505093077676 32.0 32.0 32.0 32.0 32.0 6 34.55212732841488 36.0 36.0 36.0 32.0 36.0 7 34.458043115139006 36.0 36.0 36.0 32.0 36.0 8 34.44852863917168 36.0 36.0 36.0 32.0 36.0 9 34.57346886068839 36.0 36.0 36.0 32.0 36.0 10 34.309191500309815 36.0 36.0 36.0 32.0 36.0 11 34.57253891861583 36.0 36.0 36.0 32.0 36.0 12 34.392790052074794 36.0 36.0 36.0 32.0 36.0 13 34.48425628692886 36.0 36.0 36.0 32.0 36.0 14 34.38000654003612 36.0 36.0 36.0 32.0 36.0 15 34.327251230675714 36.0 36.0 36.0 32.0 36.0 16 34.34311523720397 36.0 36.0 36.0 32.0 36.0 17 34.26737062070442 36.0 36.0 36.0 32.0 36.0 18 34.28783622021264 36.0 36.0 36.0 32.0 36.0 19 34.28757304758809 36.0 36.0 36.0 32.0 36.0 20 34.26568847627961 36.0 36.0 36.0 32.0 36.0 21 34.24305661255589 36.0 36.0 36.0 32.0 36.0 22 34.21822804300712 36.0 36.0 36.0 32.0 36.0 23 34.15655236005943 36.0 36.0 36.0 32.0 36.0 24 34.14332204375147 36.0 36.0 36.0 32.0 36.0 25 34.13120824712302 36.0 36.0 36.0 32.0 36.0 26 34.07621106051694 36.0 36.0 36.0 32.0 36.0 27 34.083531776621435 36.0 36.0 36.0 32.0 36.0 28 34.05654578074382 36.0 36.0 36.0 32.0 36.0 29 34.02749466535342 36.0 36.0 36.0 32.0 36.0 30 33.99386356070597 36.0 36.0 36.0 32.0 36.0 31 34.01274521452988 36.0 36.0 36.0 32.0 36.0 32 33.96376073680479 36.0 36.0 36.0 32.0 36.0 33 33.91875134409526 36.0 36.0 36.0 32.0 36.0 34 33.924588277230754 36.0 36.0 36.0 32.0 36.0 35 33.875339644893714 36.0 36.0 36.0 32.0 36.0 36 33.83479240295264 36.0 36.0 36.0 32.0 36.0 37 33.822084503944154 36.0 36.0 36.0 32.0 36.0 38 33.22652583657962 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 2.0 8 1.0 9 2.0 10 8.0 11 11.0 12 8.0 13 3.0 14 155.0 15 299.0 16 402.0 17 457.0 18 537.0 19 725.0 20 1024.0 21 1296.0 22 2012.0 23 2997.0 24 4402.0 25 6676.0 26 9754.0 27 13848.0 28 19726.0 29 26945.0 30 36017.0 31 48483.0 32 66276.0 33 98957.0 34 219870.0 35 457448.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.35598692774472 17.350724991053134 11.44510557301232 25.848182508189822 2 16.5437365578456 20.116291522685984 37.391025823674305 25.948946095794113 3 18.52012625930298 24.593752639404766 28.727134161312563 28.15898693997969 4 12.493003195452912 15.680600045957958 36.34881697537714 35.477579783211986 5 14.549350364956338 36.516844554034456 33.74105530465728 15.19274977635193 6 33.63028778264191 35.79646443518753 17.145191478664255 13.428056303506303 7 29.8294678997822 30.75047479137657 21.38122556076446 18.038831748076774 8 28.08727929768054 32.431113380599804 19.99617023783805 19.48543708388161 9 27.783255101439597 14.245635053125675 18.75748767602176 39.213622169412965 10 15.726197268296707 26.60518746704192 31.820641259934067 25.847974004727302 11 37.04997044156956 21.348551833310093 22.434063095955896 19.167414629164448 12 24.993764202397294 23.865035735539333 28.666698091158523 22.474501970904846 13 29.527734210420352 19.463101749230766 25.32107532858845 25.688088711760436 14 23.880246695343036 19.903855596802387 25.263881523383024 30.95201618447155 15 25.176455103888983 26.688576631509882 22.947315898344574 25.187652366256557 16 25.766389164143543 25.742033628316847 23.792314060706175 24.699263146833434 17 24.00524095012847 25.743417382353634 25.50170114798023 24.749640519537667 18 25.09447154854777 24.536873364915508 26.327610046587637 24.04104503994909 19 25.554343268089134 25.218972833521725 25.66462760133048 23.56205629705866 20 25.759507096196376 24.0425143279138 25.334579865107454 24.86339871078237 21 27.021206389610697 24.274706907151092 24.444405162440905 24.259681540797306 22 25.71768079506619 24.353026672428015 24.911517460816277 25.017775071689513 23 24.189276381110073 24.17925926362402 25.64873111601492 25.982733239250994 24 24.584250373936502 25.294410545451328 25.226547085554117 24.894791995058046 25 24.790706627852614 24.44597657799935 25.37910484114918 25.384211952998857 26 24.69442335514071 25.238150894213764 25.705171206405296 24.36225454424023 27 25.524444963845433 24.85075132553643 24.737716139283705 24.887087571334433 28 24.44266804414071 24.55491515669913 25.893336763924584 25.109080035235575 29 24.3031030378265 25.242676492887643 25.731859662079614 24.722360807206243 30 24.508943213979183 24.991996574730386 26.008087878591475 24.490972332698952 31 24.941371955171643 25.01610552655251 24.69792317271017 25.344599345565676 32 24.428864780674058 25.116593782254178 24.69824085540407 25.756300581667695 33 24.288274663275278 24.498141446480044 25.422065965146594 25.791517925098084 34 24.96439914597234 24.78025679755341 25.60148256687559 24.653861489598658 35 25.907683785832987 24.580532628295533 25.336870307877856 24.174913277993628 36 24.565140743054183 25.448363440296283 24.920963697808787 25.065532118840743 37 25.491085721244406 25.330614954618397 24.84782775221114 24.33047157192606 38 24.444335328518047 25.073628699234497 25.525663247519116 24.956372724728343 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 407.0 1 332.0 2 257.0 3 257.0 4 578.0 5 899.0 6 899.0 7 1015.0 8 1131.0 9 1084.5 10 1038.0 11 1038.0 12 1334.0 13 1630.0 14 2075.5 15 2521.0 16 2521.0 17 3603.5 18 4686.0 19 4686.0 20 5745.5 21 6805.0 22 7316.0 23 7827.0 24 7827.0 25 9093.0 26 10359.0 27 10359.0 28 13151.5 29 15944.0 30 19406.5 31 22869.0 32 22869.0 33 28923.5 34 34978.0 35 34978.0 36 39236.0 37 43494.0 38 49654.0 39 55814.0 40 55814.0 41 60219.0 42 64624.0 43 72799.5 44 80975.0 45 80975.0 46 84944.5 47 88914.0 48 88914.0 49 93059.0 50 97204.0 51 96371.5 52 95539.0 53 95539.0 54 90627.5 55 85716.0 56 85716.0 57 82744.5 58 79773.0 59 70628.5 60 61484.0 61 61484.0 62 58315.5 63 55147.0 64 45278.0 65 35409.0 66 35409.0 67 29545.0 68 23681.0 69 23681.0 70 19062.5 71 14444.0 72 11435.0 73 8426.0 74 8426.0 75 6393.0 76 4360.0 77 4360.0 78 4354.5 79 4349.0 80 3430.5 81 2512.0 82 2512.0 83 2541.0 84 2570.0 85 2570.0 86 1698.5 87 827.0 88 707.5 89 588.0 90 588.0 91 431.5 92 275.0 93 240.5 94 206.0 95 206.0 96 182.0 97 158.0 98 158.0 99 330.5 100 503.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12048985459712494 2 0.05459849971964259 3 0.011882047600857471 4 0.0020621735505620404 5 1.9639748100590862E-4 6 4.909937025147715E-4 7 9.819874050295431E-5 8 2.9459622150886295E-4 9 2.9459622150886295E-4 10 3.9279496201181723E-4 11 0.0020621735505620404 12 0.0028477634745856747 13 0.012176643822366334 14 0.008150495461745207 15 0.02327310149920017 16 0.009230681607277705 17 0.02032713928411154 18 0.004615340803638852 19 0.006481116873194984 20 0.00500813576565067 21 0.0063829181326920306 22 0.006186520651686122 23 0.008445091683254071 24 0.011980246341360426 25 0.015220804777957918 26 0.0182649657335495 27 0.0074631042782245275 28 0.005302731987159533 29 0.011292855157839746 30 0.0028477634745856747 31 0.005793725689674304 32 0.006284719392189076 33 0.0076595017592304354 34 0.010703662714822018 35 0.014435214853934284 36 0.013747823670413604 37 0.008739687904762934 38 0.005695526949171349 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1018343.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.680089188409646 #Duplication Level Percentage of deduplicated Percentage of total 1 83.70491592907328 50.79221764084498 2 10.702341940375048 12.9883812693363 3 2.650617640316338 4.8251914445630195 4 1.020385593100721 2.4766835518368016 5 0.5232763654859635 1.5876228263937555 6 0.28706529806993786 1.0451488733868737 7 0.2006230684088537 0.8521677979011157 8 0.12964942249483621 0.6293710816169973 9 0.0917990306552409 0.5013336030812612 >10 0.5306814510973739 6.097289445017051 >50 0.06860068836575438 2.9329292367484223 >100 0.07996649446705688 10.120059728094306 >500 0.00731400829077268 2.995946309976611 >1k 0.0027630697987363452 2.155657191202515 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2734 0.2684753565350771 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1758 0.17263338580419368 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1486 0.1459233283873901 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1267 0.1244178042172431 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1253 0.12304302185020174 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1218 0.11960606593259834 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1196 0.11744569364153334 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1188 0.11666010371750972 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1141 0.11204476291387087 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1139 0.11184836543286496 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1118 0.10978619188230293 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1111 0.10909880069878224 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1109 0.10890240321777633 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1083 0.10634923596469952 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1030 0.10114470271804293 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1025 0.10065370901552817 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.9639748100590862E-4 2 0.0 0.0 0.0 0.0 1.9639748100590862E-4 3 0.0 0.0 0.0 0.0 1.9639748100590862E-4 4 0.0 0.0 0.0 0.0 1.9639748100590862E-4 5 0.0 0.0 0.0 0.0 1.9639748100590862E-4 6 0.0 0.0 0.0 0.0 3.9279496201181723E-4 7 0.0 0.0 0.0 9.819874050295431E-5 4.909937025147715E-4 8 0.0 0.0 0.0 9.819874050295431E-5 4.909937025147715E-4 9 0.0 0.0 0.0 9.819874050295431E-5 4.909937025147715E-4 10 0.0 0.0 0.0 9.819874050295431E-5 4.909937025147715E-4 11 0.0 0.0 0.0 9.819874050295431E-5 4.909937025147715E-4 12 0.0 0.0 0.0 1.9639748100590862E-4 5.891924430177259E-4 13 0.0 0.0 0.0 1.9639748100590862E-4 5.891924430177259E-4 14 0.0 0.0 0.0 1.9639748100590862E-4 5.891924430177259E-4 15 0.0 0.0 0.0 1.9639748100590862E-4 9.81987405029543E-4 16 0.0 0.0 0.0 1.9639748100590862E-4 9.81987405029543E-4 17 0.0 0.0 0.0 2.9459622150886295E-4 9.81987405029543E-4 18 0.0 0.0 0.0 3.9279496201181723E-4 9.81987405029543E-4 19 0.0 0.0 0.0 3.9279496201181723E-4 9.81987405029543E-4 20 0.0 0.0 0.0 4.909937025147715E-4 0.0010801861455324974 21 0.0 0.0 0.0 0.0011783848860354518 0.0011783848860354518 22 0.0 0.0 0.0 0.001276583626538406 0.0011783848860354518 23 0.0 0.0 0.0 0.0023567697720709036 0.0011783848860354518 24 0.0 0.0 0.0 0.0032405584365974923 0.001276583626538406 25 0.0 0.0 0.0 0.003829750879615218 0.001276583626538406 26 0.0 0.0 0.0 0.004615340803638852 0.001571179848047269 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGCCG 40 1.5950702E-4 23.996244 5 CTAGGTC 60 0.002444201 15.997496 3 GGTCTAC 75 6.19523E-4 14.948612 1 GTATAGA 110 3.5038847E-6 14.560336 1 ATCGTTT 255 0.0 14.43124 29 GCGACGA 190 1.8189894E-11 14.315658 32 GTCGTAA 90 1.5340329E-4 14.222091 30 CGTAAAC 90 1.5340329E-4 14.222091 32 TCGTTTA 260 0.0 14.153715 30 GACTGCG 80 0.0010186324 13.998496 7 CATCGTT 275 0.0 13.963508 28 TTAACAC 115 5.621365E-6 13.910866 3 CTAGCGG 185 1.8189894E-10 13.837711 29 GTCCTAA 105 3.6467012E-5 13.728318 1 CCCCTAT 70 0.006757184 13.728317 1 GGGTATA 70 0.006757184 13.728317 1 TACTAAG 70 0.006781413 13.720898 2 CGTGCAA 70 0.0068035033 13.71416 11 AACCCCG 70 0.0068079284 13.712812 7 TACACCG 70 0.0068101417 13.712139 5 >>END_MODULE