##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062842_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 818479 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.255477538214176 32.0 32.0 32.0 32.0 32.0 2 30.90526085580693 32.0 32.0 32.0 32.0 32.0 3 30.964452356138644 32.0 32.0 32.0 32.0 32.0 4 31.01991376687734 32.0 32.0 32.0 32.0 32.0 5 30.953706814713634 32.0 32.0 32.0 32.0 32.0 6 34.60599477811893 36.0 36.0 36.0 32.0 36.0 7 34.52908749033268 36.0 36.0 36.0 32.0 36.0 8 34.5139337722776 36.0 36.0 36.0 32.0 36.0 9 34.6220281766545 36.0 36.0 36.0 32.0 36.0 10 34.3860538877601 36.0 36.0 36.0 32.0 36.0 11 34.633054727121895 36.0 36.0 36.0 32.0 36.0 12 34.4612519075016 36.0 36.0 36.0 32.0 36.0 13 34.53588546560144 36.0 36.0 36.0 32.0 36.0 14 34.43878951078769 36.0 36.0 36.0 32.0 36.0 15 34.397830610192806 36.0 36.0 36.0 32.0 36.0 16 34.39996261357958 36.0 36.0 36.0 32.0 36.0 17 34.33085393760866 36.0 36.0 36.0 32.0 36.0 18 34.349453070879036 36.0 36.0 36.0 32.0 36.0 19 34.35106826198351 36.0 36.0 36.0 32.0 36.0 20 34.32556485871965 36.0 36.0 36.0 32.0 36.0 21 34.28715092262599 36.0 36.0 36.0 32.0 36.0 22 34.27242849236205 36.0 36.0 36.0 32.0 36.0 23 34.22835405673206 36.0 36.0 36.0 32.0 36.0 24 34.21159370002162 36.0 36.0 36.0 32.0 36.0 25 34.20175105286758 36.0 36.0 36.0 32.0 36.0 26 34.1497900373742 36.0 36.0 36.0 32.0 36.0 27 34.156600230427415 36.0 36.0 36.0 32.0 36.0 28 34.142379951104424 36.0 36.0 36.0 32.0 36.0 29 34.10411873731641 36.0 36.0 36.0 32.0 36.0 30 34.07605204287465 36.0 36.0 36.0 32.0 36.0 31 34.09089542920466 36.0 36.0 36.0 32.0 36.0 32 34.04538418212318 36.0 36.0 36.0 32.0 36.0 33 34.00589141566247 36.0 36.0 36.0 32.0 36.0 34 34.00237269374046 36.0 36.0 36.0 32.0 36.0 35 33.9470640053074 36.0 36.0 36.0 32.0 36.0 36 33.91240581615411 36.0 36.0 36.0 32.0 36.0 37 33.912955616454425 36.0 36.0 36.0 32.0 36.0 38 33.314400247287956 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 1.0 9 3.0 10 8.0 11 12.0 12 4.0 13 2.0 14 123.0 15 269.0 16 335.0 17 325.0 18 426.0 19 549.0 20 758.0 21 1041.0 22 1582.0 23 2338.0 24 3355.0 25 5043.0 26 7343.0 27 10867.0 28 14862.0 29 20523.0 30 27760.0 31 37150.0 32 51250.0 33 76862.0 34 174494.0 35 381191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.730067983276946 17.11801299975292 11.304329744579562 25.84758927239057 2 16.772771612770732 19.955675514450075 37.24662554488802 26.024927327891177 3 18.853886261078248 24.17401143474388 28.446094310365684 28.526007993812186 4 12.62147784503129 15.437124753501077 35.99006429131713 35.9513331101505 5 14.814466380851263 36.373410615081426 33.36843918644018 15.443683817627129 6 34.00193285822326 35.435449010784666 17.063032925787773 13.499585205204301 7 30.123436276312525 30.494979101479696 21.00542591807487 18.376158704132912 8 28.225995630904265 32.50260239762681 19.714811430023605 19.55659054144532 9 27.852374412933305 14.009451712695304 18.614840264100597 39.5233336102708 10 16.153598037323118 26.57494312586594 31.304720736394803 25.966738100416144 11 37.70824296998613 21.132377467301193 21.932177089760586 19.227202472952087 12 24.962154302924414 23.83515281842007 28.614645887678613 22.588046990976903 13 29.921328158604776 19.29036483791499 25.015885895280178 25.772421108200056 14 23.963166300292897 19.816931233740764 25.052023446292132 31.16787901967421 15 25.4753367503318 26.860345463922314 22.530069830934345 25.13424795481154 16 25.90189415184741 25.588340597853517 23.777892641511507 24.731872608787565 17 24.110244938511794 25.55582576773186 25.239921934480204 25.094007359276144 18 25.039588088384075 24.58175917734975 26.40611025038244 23.97254248388374 19 25.637905185717376 24.819744361398353 25.500078810294458 24.042271642589817 20 25.958133658515127 23.905382850244496 25.058955491963726 25.07752799927665 21 27.2714943073656 24.09942988125988 24.14366112513532 24.485414686239196 22 25.992206773435584 24.276670540064003 24.902890140920793 24.828232545579624 23 24.39286059040527 23.87012501420477 25.55025922943546 26.186755165954494 24 24.805765804516938 24.960346652133218 25.160263068497034 25.073624474852814 25 25.123456714688814 24.363347073150166 25.173682609009134 25.339513603151886 26 24.53360511696228 25.36166531019262 25.694795783443197 24.409933789401904 27 25.467564364178447 24.62969977639023 24.986742262246604 24.915993597184716 28 24.492778237330302 24.64086683145392 25.67553202538033 25.190822905835446 29 24.36975714067512 24.86427371315106 25.713639835038947 25.05232931113487 30 24.457053629355944 25.19833197100376 25.948163054355117 24.39645134528518 31 25.27800416166212 24.933683437537802 24.465954646924633 25.32235775387544 32 24.56372722718442 25.074595862709398 24.492980291052163 25.86869661905402 33 24.290867235097032 24.52657277546023 25.32655420249904 25.856005786943697 34 25.17638979517522 24.790617309294955 25.502775069101784 24.530217826428043 35 25.87639813716133 24.51861799953808 25.36571834280191 24.23926552049868 36 24.46152793358213 25.567799944765827 24.843890147543668 25.12678197410837 37 25.524021789335542 25.235525708043433 24.87799096265558 24.362461539965445 38 24.45639689746685 25.08577419149882 25.311817288753563 25.14601162228076 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 488.0 1 360.5 2 233.0 3 233.0 4 468.0 5 703.0 6 703.0 7 824.5 8 946.0 9 882.0 10 818.0 11 818.0 12 1086.0 13 1354.0 14 1658.5 15 1963.0 16 1963.0 17 2874.0 18 3785.0 19 3785.0 20 4543.5 21 5302.0 22 5430.5 23 5559.0 24 5559.0 25 6638.5 26 7718.0 27 7718.0 28 10009.0 29 12300.0 30 15262.5 31 18225.0 32 18225.0 33 22834.0 34 27443.0 35 27443.0 36 30616.5 37 33790.0 38 39006.0 39 44222.0 40 44222.0 41 47140.0 42 50058.0 43 56774.0 44 63490.0 45 63490.0 46 66018.0 47 68546.0 48 68546.0 49 72886.5 50 77227.0 51 77287.0 52 77347.0 53 77347.0 54 73810.5 55 70274.0 56 70274.0 57 68438.0 58 66602.0 59 59402.5 60 52203.0 61 52203.0 62 49214.0 63 46225.0 64 38104.0 65 29983.0 66 29983.0 67 24908.5 68 19834.0 69 19834.0 70 15984.0 71 12134.0 72 9443.5 73 6753.0 74 6753.0 75 5094.5 76 3436.0 77 3436.0 78 3465.5 79 3495.0 80 2676.0 81 1857.0 82 1857.0 83 1948.0 84 2039.0 85 2039.0 86 1378.0 87 717.0 88 599.0 89 481.0 90 481.0 91 346.0 92 211.0 93 192.5 94 174.0 95 174.0 96 164.0 97 154.0 98 154.0 99 272.0 100 390.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11301450617547916 2 0.05143687254040727 3 0.011729073073347026 4 0.0020770233567385357 5 2.4435568902806304E-4 6 2.4435568902806304E-4 7 0.0 8 3.6653353354209456E-4 9 3.6653353354209456E-4 10 6.108892225701576E-4 11 0.0029322682683367565 12 0.0029322682683367565 13 0.017471431765506504 14 0.011973428762375088 15 0.02651259225954484 16 0.014416985652655718 17 0.023458146146694052 18 0.006231070070215608 19 0.007086314981813829 20 0.007941559893412048 21 0.0064754257592436705 22 0.009285516183066394 23 0.0112403616952909 24 0.01673836469842232 25 0.021503300634469546 26 0.022114189857039706 27 0.010873828161748806 28 0.006108892225701576 29 0.012706495829459277 30 0.003420979646392882 31 0.006841959292785764 32 0.008430271271468174 33 0.010385116783692678 34 0.014783519186197813 35 0.01930409943321698 36 0.01771578745453457 37 0.011851250917861057 38 0.006231070070215608 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 818479.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.38974728951386 #Duplication Level Percentage of deduplicated Percentage of total 1 83.75047370487927 51.41420416119614 2 10.918381213475987 13.405533270117335 3 2.593830829605839 4.777038574237578 4 0.9472945177622868 2.3261668421667476 5 0.4779648662749686 1.4671071176943307 6 0.27963180589283854 1.0299915538723052 7 0.1688674178594972 0.7256709675479092 8 0.1251853062477513 0.6148075451927882 9 0.08263631622606202 0.4565720313048872 >10 0.4910177305490889 5.842449030045124 >50 0.0724519034881572 3.1958932258650083 >100 0.08345824227721539 10.482493461446241 >500 0.007805447113246676 3.3886232468122524 >1k 0.0010006983478521379 0.8734489725013888 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2394 0.2924937597665914 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1638 0.20012730931398362 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1050 0.1282867367397331 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1015 0.12401051218174199 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1012 0.12364397864819988 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 978 0.11948993193472282 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 948 0.11582459659930186 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 939 0.1147249959986756 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 935 0.11423628462061947 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 916 0.11191490557485287 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 909 0.11105966066325465 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 877 0.10714996963880564 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 874 0.10678343610526354 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 852 0.10409552352595484 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 838 0.1023850337027584 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.2217784451403152E-4 13 0.0 0.0 0.0 0.0 1.2217784451403152E-4 14 0.0 0.0 0.0 0.0 1.2217784451403152E-4 15 0.0 0.0 0.0 0.0 1.2217784451403152E-4 16 0.0 0.0 0.0 0.0 1.2217784451403152E-4 17 0.0 0.0 0.0 0.0 1.2217784451403152E-4 18 0.0 0.0 0.0 0.0 1.2217784451403152E-4 19 0.0 0.0 0.0 2.4435568902806304E-4 1.2217784451403152E-4 20 0.0 0.0 0.0 2.4435568902806304E-4 1.2217784451403152E-4 21 0.0 0.0 0.0 6.108892225701576E-4 1.2217784451403152E-4 22 0.0 0.0 0.0 0.0010996006006262836 1.2217784451403152E-4 23 0.0 0.0 0.0 0.0020770233567385357 1.2217784451403152E-4 24 0.0 0.0 0.0 0.0034209796463928826 1.2217784451403152E-4 25 0.0 0.0 0.0 0.003909691024449009 1.2217784451403152E-4 26 0.0 1.2217784451403152E-4 0.0 0.004887113780561261 1.2217784451403152E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGTA 245 0.0 18.940294 10 AAATCGT 45 0.008840957 17.780289 12 GTTATTC 145 3.6379788E-12 17.65443 3 TACCGTC 245 0.0 17.630835 7 CCGTCGT 250 0.0 17.281385 9 ACCGTCG 250 0.0 17.278217 8 ACGTTTT 65 2.1001464E-4 17.230045 29 ATACCGT 255 0.0 16.936325 6 GTCGTAG 260 0.0 16.617733 11 CCGATAA 90 8.568228E-6 16.001284 9 CGATAAC 90 8.568228E-6 16.001284 10 CGTTTTT 70 3.6959536E-4 15.999328 30 GTCCTAT 245 0.0 15.6833515 1 TATTAGC 215 0.0 15.632983 2 CGTTATT 165 2.910383E-11 15.520189 2 CGACGGT 355 0.0 15.322363 7 TCCAATA 230 0.0 15.309319 2 GTAGAAC 180 7.2759576E-12 15.110476 3 ACGACGG 360 0.0 15.106783 6 GATATAT 85 9.3763665E-5 15.068319 1 >>END_MODULE