##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062841_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1765198 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.210694211074337 32.0 32.0 32.0 32.0 32.0 2 31.235051252040847 32.0 32.0 32.0 32.0 32.0 3 31.33554366139096 32.0 32.0 32.0 32.0 32.0 4 31.438214863148495 32.0 32.0 32.0 32.0 32.0 5 31.3415157959617 32.0 32.0 32.0 32.0 32.0 6 34.872810302300365 36.0 36.0 36.0 36.0 36.0 7 34.90118898843076 36.0 36.0 36.0 36.0 36.0 8 34.82913021655361 36.0 36.0 36.0 32.0 36.0 9 34.95307495249825 36.0 36.0 36.0 32.0 36.0 10 34.78836028592826 36.0 36.0 36.0 32.0 36.0 11 34.97470708668376 36.0 36.0 36.0 36.0 36.0 12 34.86079012099493 36.0 36.0 36.0 32.0 36.0 13 34.93020046476373 36.0 36.0 36.0 36.0 36.0 14 34.86837737183024 36.0 36.0 36.0 32.0 36.0 15 34.83427354891633 36.0 36.0 36.0 32.0 36.0 16 34.85062525563704 36.0 36.0 36.0 32.0 36.0 17 34.81140812532079 36.0 36.0 36.0 32.0 36.0 18 34.81454714995145 36.0 36.0 36.0 32.0 36.0 19 34.81161830004339 36.0 36.0 36.0 32.0 36.0 20 34.79586142744327 36.0 36.0 36.0 32.0 36.0 21 34.792854399336505 36.0 36.0 36.0 32.0 36.0 22 34.77479523543534 36.0 36.0 36.0 32.0 36.0 23 34.71961672288321 36.0 36.0 36.0 32.0 36.0 24 34.68852502665423 36.0 36.0 36.0 32.0 36.0 25 34.67191442546389 36.0 36.0 36.0 32.0 36.0 26 34.6026604380925 36.0 36.0 36.0 32.0 36.0 27 34.596067976510284 36.0 36.0 36.0 32.0 36.0 28 34.56544251693011 36.0 36.0 36.0 32.0 36.0 29 34.5269210592806 36.0 36.0 36.0 32.0 36.0 30 34.50664004831186 36.0 36.0 36.0 32.0 36.0 31 34.50921199774756 36.0 36.0 36.0 32.0 36.0 32 34.48713345471726 36.0 36.0 36.0 32.0 36.0 33 34.45286307824958 36.0 36.0 36.0 32.0 36.0 34 34.45079305550992 36.0 36.0 36.0 32.0 36.0 35 34.41991946512516 36.0 36.0 36.0 32.0 36.0 36 34.388081676956354 36.0 36.0 36.0 32.0 36.0 37 34.39102638910762 36.0 36.0 36.0 32.0 36.0 38 33.94141053864779 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 7.0 21 38.0 22 120.0 23 411.0 24 1155.0 25 2782.0 26 6099.0 27 11889.0 28 20755.0 29 33158.0 30 50687.0 31 73265.0 32 106094.0 33 171955.0 34 417585.0 35 869197.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.576178117108896 18.402575350940857 12.071107696648406 26.950138835301846 2 16.09955370445695 20.378223859306434 36.03442786588247 27.487794570354147 3 17.852558183274624 24.068234838244777 28.587161326944628 29.492045651535975 4 12.290816430583346 15.937833532366943 35.532881334424054 36.23846870262566 5 14.641085385937094 36.54345662268857 32.888680413574235 15.926777577800097 6 34.996360175504684 35.333829973459025 16.22931177575282 13.440498075283466 7 30.659283883642992 30.20817046116334 20.6162176493382 18.516328005855467 8 28.45542088678948 32.41926766729702 19.085643518922428 20.039667926991072 9 27.447475688828334 13.929246204964493 18.24421361538919 40.37906449081798 10 16.119461834835256 26.109587504525027 30.883483468852805 26.88746719178691 11 38.254448010469574 20.785727842095277 21.769459780240947 19.190364367194203 12 24.93418574151864 23.519441194882152 27.89419865793864 23.652174405660563 13 29.452293426739338 18.78447561377002 25.17866277814884 26.5845681813418 14 23.926890921018494 19.43872585398352 24.349053194032624 32.28533003096536 15 25.479804531842888 26.740059755336226 21.666124706690127 26.114011006130756 16 26.497197481528982 25.36553972982068 22.89510865070094 25.242154137949395 17 24.697909243042425 25.54274364688834 24.46394115560974 25.2954059544595 18 25.79988193958978 24.25319992431444 25.343842447136243 24.60307568895954 19 25.96615223901228 24.620977363445913 24.77693720477816 24.635933192763645 20 26.21683233269016 23.674907857362175 24.298973826165675 25.809285983781987 21 27.577189641048765 23.81166305422961 23.755975250368515 24.85517205435311 22 26.37092269535769 23.736940558509584 24.456179986607733 25.43595675952499 23 24.68691826507455 23.45504233529006 25.117862399260364 26.74017700037503 24 25.207087250268806 24.638822387063662 24.5624003652848 25.591689997382726 25 25.3193836155398 23.90169482499687 24.740014853866167 26.038906705597164 26 25.190998403578526 24.900719352729837 25.039457329999244 24.868824913692404 27 26.088195455114537 24.032499562370802 24.112717419568284 25.766587562946373 28 24.964904786885096 24.119730477827417 25.327583647840076 25.587781087447414 29 24.93731581386337 24.325713036157985 25.179441626378456 25.557529523600188 30 24.935219731724146 24.56347673178873 25.365709682426562 25.135593854060563 31 25.695587690446057 24.372110097564125 24.02642649719748 25.905875714792337 32 25.458957012187867 24.20312055644749 23.998724222438504 26.339198208926142 33 24.927288610116257 23.817384791961015 24.855511959564875 26.39981463835785 34 25.830983266466422 23.971928361577568 24.889615782478796 25.307472589477214 35 26.398851573591177 23.857323654343592 24.85437894219232 24.88944582987291 36 25.052883585864024 24.56392993873775 24.469606242472516 25.91358023292571 37 26.302205191712204 24.39029502639364 24.275180461342014 25.032319320552144 38 25.162984733706622 23.966063825206945 24.93575784218863 25.935193598897797 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 35.0 1 54.5 2 74.0 3 74.0 4 296.0 5 518.0 6 518.0 7 613.5 8 709.0 9 724.0 10 739.0 11 739.0 12 1005.5 13 1272.0 14 1883.0 15 2494.0 16 2494.0 17 3884.0 18 5274.0 19 5274.0 20 6511.0 21 7748.0 22 8773.0 23 9798.0 24 9798.0 25 12032.5 26 14267.0 27 14267.0 28 18273.5 29 22280.0 30 27777.0 31 33274.0 32 33274.0 33 44279.5 34 55285.0 35 55285.0 36 62368.0 37 69451.0 38 80526.0 39 91601.0 40 91601.0 41 98755.5 42 105910.0 43 121719.5 44 137529.0 45 137529.0 46 140553.0 47 143577.0 48 143577.0 49 155231.0 50 166885.0 51 169455.0 52 172025.0 53 172025.0 54 164755.5 55 157486.0 56 157486.0 57 153171.0 58 148856.0 59 133551.5 60 118247.0 61 118247.0 62 112504.5 63 106762.0 64 88930.0 65 71098.0 66 71098.0 67 60086.5 68 49075.0 69 49075.0 70 39406.0 71 29737.0 72 23122.0 73 16507.0 74 16507.0 75 12458.5 76 8410.0 77 8410.0 78 8118.5 79 7827.0 80 6115.5 81 4404.0 82 4404.0 83 4205.0 84 4006.0 85 4006.0 86 2552.0 87 1098.0 88 883.5 89 669.0 90 669.0 91 418.0 92 167.0 93 110.5 94 54.0 95 54.0 96 37.5 97 21.0 98 21.0 99 25.0 100 29.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008894186374559682 2 0.0 3 0.0 4 1.1330173725553733E-4 5 5.6650868627768666E-5 6 1.6995260588330603E-4 7 5.665086862776867E-4 8 0.0024926382196218213 9 0.0035690047235494263 10 8.4976302941653E-4 11 0.0047020220961048 12 1.6995260588330603E-4 13 5.6650868627768666E-5 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 2.2660347451107466E-4 24 0.0 25 5.6650868627768666E-5 26 0.0 27 2.8325434313884333E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.1330173725553733E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1765198.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.46902885642727 #Duplication Level Percentage of deduplicated Percentage of total 1 80.83200657660143 43.220088921672215 2 11.794162002623821 12.612447769113425 3 3.253537822745254 5.218905231895305 4 1.3630507124482354 2.915239915066738 5 0.6991668910315364 1.8691887336011883 6 0.4347926207835708 1.394876351234303 7 0.29479202738526966 1.1033570393235377 8 0.20670572281272967 0.884188340629 9 0.14770222006611608 0.710774484018618 >10 0.8080494327049697 7.7299819843853355 >50 0.06743765494060268 2.5441636710468094 >100 0.07883473724591063 9.374051166428275 >500 0.012925140604740497 4.812646525365012 >1k 0.006836438005813156 5.610089866220275 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3059 0.17329500713234436 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2577 0.14598928845375986 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2575 0.14587598671650434 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2515 0.1424769345988382 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2435 0.1379448651086167 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2430 0.13766161076547787 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2304 0.130523601318379 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2247 0.1272945018065962 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2197 0.12446195837520777 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2196 0.12440530750657999 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2190 0.1240654022948134 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2172 0.12304568665951354 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2126 0.12043974670263619 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1915 0.108486413422177 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1848 0.1046908052241165 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1800 0.1019715635299836 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1330173725553735E-4 2 0.0 0.0 0.0 0.0 1.1330173725553735E-4 3 0.0 0.0 0.0 0.0 1.1330173725553735E-4 4 0.0 0.0 0.0 0.0 1.1330173725553735E-4 5 0.0 0.0 0.0 0.0 1.1330173725553735E-4 6 0.0 0.0 0.0 0.0 1.1330173725553735E-4 7 0.0 0.0 0.0 0.0 1.1330173725553735E-4 8 0.0 0.0 0.0 0.0 1.1330173725553735E-4 9 0.0 0.0 0.0 0.0 1.1330173725553735E-4 10 0.0 0.0 0.0 0.0 1.1330173725553735E-4 11 0.0 0.0 0.0 0.0 1.1330173725553735E-4 12 0.0 0.0 0.0 0.0 3.39905211766612E-4 13 0.0 0.0 0.0 0.0 3.9655608039438066E-4 14 0.0 0.0 0.0 0.0 3.9655608039438066E-4 15 0.0 0.0 0.0 0.0 5.09857817649918E-4 16 0.0 0.0 0.0 0.0 5.665086862776867E-4 17 0.0 0.0 0.0 0.0 5.665086862776867E-4 18 0.0 0.0 0.0 0.0 5.665086862776867E-4 19 0.0 0.0 0.0 0.0 5.665086862776867E-4 20 0.0 0.0 0.0 5.665086862776867E-5 6.79810423533224E-4 21 0.0 0.0 0.0 5.665086862776867E-5 9.064138980442988E-4 22 0.0 0.0 0.0 5.665086862776867E-5 9.064138980442988E-4 23 0.0 0.0 0.0 1.69952605883306E-4 9.630647666720674E-4 24 0.0 0.0 0.0 3.9655608039438066E-4 9.630647666720674E-4 25 0.0 0.0 0.0 4.532069490221494E-4 9.630647666720674E-4 26 0.0 0.0 0.0 7.364612921609927E-4 0.0010763665039276048 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2530 0.0 17.83535 1 ATCGTTT 495 0.0 16.807932 29 CATCGTT 485 0.0 16.4947 28 TCTAGCG 490 0.0 16.326385 28 CGTTTAT 515 0.0 16.155197 31 CGGCATC 525 0.0 16.152237 25 TCGTTTA 520 0.0 15.999858 30 TACCGTC 490 0.0 15.673775 7 TAGCGGC 530 0.0 15.094206 30 CGTCGTA 575 0.0 15.026379 10 GCATCGT 545 0.0 14.972344 27 CGCGTAA 385 0.0 14.961331 10 ATACCGT 535 0.0 14.953562 6 CTAGCGG 520 0.0 14.769099 29 ACCGTCG 530 0.0 14.490849 8 GCGTAAC 400 0.0 14.40028 11 TCGCGTA 390 0.0 14.359254 9 CGCGGTT 695 0.0 14.273661 10 GTTTTCG 685 0.0 14.24805 28 CGCATCG 565 0.0 14.159165 13 >>END_MODULE