##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062838_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 890330 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.160692102928127 32.0 32.0 32.0 32.0 32.0 2 31.20075814585603 32.0 32.0 32.0 32.0 32.0 3 31.317126234092978 32.0 32.0 32.0 32.0 32.0 4 31.43596306987297 32.0 32.0 32.0 32.0 32.0 5 31.32879157166444 32.0 32.0 32.0 32.0 32.0 6 34.86749744476767 36.0 36.0 36.0 32.0 36.0 7 34.90494423416037 36.0 36.0 36.0 36.0 36.0 8 34.845680814978714 36.0 36.0 36.0 32.0 36.0 9 34.978567497444764 36.0 36.0 36.0 36.0 36.0 10 34.79385845697663 36.0 36.0 36.0 32.0 36.0 11 34.98087787674233 36.0 36.0 36.0 36.0 36.0 12 34.8797019082812 36.0 36.0 36.0 32.0 36.0 13 34.94268192692597 36.0 36.0 36.0 36.0 36.0 14 34.88434063774106 36.0 36.0 36.0 32.0 36.0 15 34.857431514157675 36.0 36.0 36.0 32.0 36.0 16 34.86324733525771 36.0 36.0 36.0 32.0 36.0 17 34.83205552997203 36.0 36.0 36.0 32.0 36.0 18 34.832177956488046 36.0 36.0 36.0 32.0 36.0 19 34.83113789269147 36.0 36.0 36.0 32.0 36.0 20 34.81229207147911 36.0 36.0 36.0 32.0 36.0 21 34.80652454707805 36.0 36.0 36.0 32.0 36.0 22 34.78110138937248 36.0 36.0 36.0 32.0 36.0 23 34.73749508609168 36.0 36.0 36.0 32.0 36.0 24 34.70652791661519 36.0 36.0 36.0 32.0 36.0 25 34.68952298585918 36.0 36.0 36.0 32.0 36.0 26 34.62574214055463 36.0 36.0 36.0 32.0 36.0 27 34.608221670616516 36.0 36.0 36.0 32.0 36.0 28 34.58236608897825 36.0 36.0 36.0 32.0 36.0 29 34.53556771084879 36.0 36.0 36.0 32.0 36.0 30 34.52174811586715 36.0 36.0 36.0 32.0 36.0 31 34.506963710085024 36.0 36.0 36.0 32.0 36.0 32 34.47847315040491 36.0 36.0 36.0 32.0 36.0 33 34.43554187773073 36.0 36.0 36.0 32.0 36.0 34 34.43053137600665 36.0 36.0 36.0 32.0 36.0 35 34.41082744600317 36.0 36.0 36.0 32.0 36.0 36 34.3698460121528 36.0 36.0 36.0 32.0 36.0 37 34.358935450900226 36.0 36.0 36.0 32.0 36.0 38 33.910145676322266 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 10.0 21 17.0 22 47.0 23 169.0 24 505.0 25 1268.0 26 2818.0 27 5592.0 28 10051.0 29 16212.0 30 25486.0 31 37070.0 32 54623.0 33 89318.0 34 213997.0 35 433146.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.96949392810326 19.25259112899874 12.417649444144278 26.36026549875372 2 15.382049352487279 21.355340154774073 37.02761897274044 26.234991519998204 3 17.342221423517124 25.393393460851595 29.709096627093324 27.55528848853796 4 12.02634082457159 16.78548042352883 36.77528194633669 34.41289680556289 5 13.81566385497512 37.42230408949491 33.52172789864432 15.240304156885648 6 33.0182067323352 36.806352700684016 16.9182213336628 13.257219233317983 7 29.058555153579096 31.344579439147363 21.522076819311643 18.074788587961894 8 27.47436286237378 33.4593568532309 19.896103604362526 19.170176680032796 9 27.401745498657743 14.140560940817037 19.002235226723876 39.455458333801346 10 15.610886410631672 27.067428489275215 32.002390149170914 25.319294950922195 11 36.760345059981134 21.443927753066454 22.791481331715865 19.004245855236555 12 24.269258071182755 24.397750042680897 29.086246866323425 22.246745019812924 13 29.199655408281654 19.721473747345083 25.656807764320828 25.422063080052432 14 23.32135275684297 20.091651410151293 25.75629261060506 30.830703222400686 15 24.761155975874114 27.6011141936136 22.873878224927836 24.763851605584446 16 25.163141756427393 26.207585951276492 24.175305785495265 24.45396650680085 17 23.60731414194737 26.21084317050981 25.784259768849754 24.397582918693068 18 24.456100546988196 25.006009007895948 26.970112205586695 23.567778239529165 19 25.160895398335448 25.43248009165141 26.025406310019882 23.381218199993263 20 25.293767479473907 24.568081497871574 25.801332090348524 24.336818932306 21 26.394145990812394 24.712185369469747 24.93727045028248 23.956398189435376 22 25.15207878444798 24.856008122849108 25.49678320798627 24.495129884716643 23 23.75823714208375 24.507175453513145 26.15263830030989 25.581949104093216 24 24.399155369357427 25.52312064066133 25.69822425392832 24.379499736052924 25 24.430716700549233 24.734985904102974 25.944986690328303 24.889310705019486 26 24.14857412420114 25.51918951400043 26.310918423505893 24.021317938292544 27 24.867436644206805 25.224271027900926 25.374552553045 24.533739774847277 28 24.021991845720127 24.972089000707605 26.28362517268878 24.722293980883492 29 24.120494648051846 25.269506812080916 26.121325800545865 24.488672739321377 30 24.16890366493323 25.238844024125882 26.361349162670024 24.230903148270865 31 24.617389057989733 25.0158929835005 25.399121673986052 24.967596284523715 32 24.08578841553132 25.38081385553671 25.400918760459607 25.132478968472366 33 23.879460424786313 24.9125605112711 26.045511214942774 25.16246784899981 34 24.538766524771713 24.921096672020486 26.367189693709076 24.172947109498725 35 25.452248042860514 24.94794065121921 25.73326744016264 23.86654386575764 36 24.242584210348973 25.60488807520807 25.551424752619816 24.601102961823145 37 25.144160030550474 25.327575168757647 25.425067109947996 24.103197690743883 38 24.190019430997495 25.137645592083835 26.016196241842916 24.656138735075757 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 221.0 1 187.0 2 153.0 3 153.0 4 471.5 5 790.0 6 790.0 7 871.0 8 952.0 9 946.0 10 940.0 11 940.0 12 1213.5 13 1487.0 14 1952.5 15 2418.0 16 2418.0 17 3690.0 18 4962.0 19 4962.0 20 5957.0 21 6952.0 22 7590.0 23 8228.0 24 8228.0 25 9570.0 26 10912.0 27 10912.0 28 14090.5 29 17269.0 30 20571.5 31 23874.0 32 23874.0 33 29782.0 34 35690.0 35 35690.0 36 39063.5 37 42437.0 38 47508.5 39 52580.0 40 52580.0 41 55323.0 42 58066.0 43 64421.5 44 70777.0 45 70777.0 46 73054.5 47 75332.0 48 75332.0 49 79112.0 50 82892.0 51 81710.5 52 80529.0 53 80529.0 54 75949.0 55 71369.0 56 71369.0 57 68701.0 58 66033.0 59 58760.5 60 51488.0 61 51488.0 62 48528.0 63 45568.0 64 37312.0 65 29056.0 66 29056.0 67 24212.0 68 19368.0 69 19368.0 70 15755.5 71 12143.0 72 9439.5 73 6736.0 74 6736.0 75 5084.5 76 3433.0 77 3433.0 78 3343.5 79 3254.0 80 2572.5 81 1891.0 82 1891.0 83 1764.0 84 1637.0 85 1637.0 86 1072.0 87 507.0 88 399.5 89 292.0 90 292.0 91 176.0 92 60.0 93 38.0 94 16.0 95 16.0 96 11.5 97 7.0 98 7.0 99 9.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00909775027237092 2 0.0 3 0.0 4 1.1231790459717183E-4 5 0.0 6 0.0 7 7.862253321802029E-4 8 0.0022463580919434368 9 0.0044927161838868735 10 0.0010108611413745467 11 0.0056158952298585915 12 2.2463580919434366E-4 13 1.1231790459717183E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 2.2463580919434366E-4 23 3.369537137915155E-4 24 0.0 25 0.0 26 0.0 27 1.1231790459717183E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 890330.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.80913420387149 #Duplication Level Percentage of deduplicated Percentage of total 1 85.25925775980353 52.69800904998168 2 9.61941631238945 11.891355876307802 3 2.264602266355573 4.199193161986893 4 0.9233732115022817 2.2829159500001737 5 0.47502121430663213 1.468032499238231 6 0.27912182161737364 1.0351366878946395 7 0.19230177693834216 0.8320204436897464 8 0.14175452661096416 0.7009379647442684 9 0.09955688989312596 0.5538172651491852 >10 0.5761268627542915 6.919383791554829 >50 0.07887931170163892 3.445029644433824 >100 0.0839998246203445 10.429950451148306 >500 0.005673190741652019 2.608986373405768 >1k 9.150307647825838E-4 0.9352308404647254 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2866 0.3219031145754945 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2127 0.23890018307818447 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1138 0.12781777543158154 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1097 0.1232127413430975 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1040 0.11681062078105871 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 962 0.1080498242224793 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 934 0.10490492289375848 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 932 0.10468028708456416 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 931 0.10456796917996697 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 905 0.1016477036604405 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 900 0.10108611413745465 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 1.1231790459717183E-4 0.0 0.0 1.1231790459717183E-4 11 0.0 1.1231790459717183E-4 0.0 0.0 1.1231790459717183E-4 12 0.0 1.1231790459717183E-4 0.0 0.0 3.369537137915155E-4 13 0.0 1.1231790459717183E-4 0.0 0.0 5.615895229858592E-4 14 0.0 1.1231790459717183E-4 0.0 0.0 5.615895229858592E-4 15 0.0 1.1231790459717183E-4 0.0 0.0 5.615895229858592E-4 16 0.0 1.1231790459717183E-4 0.0 1.1231790459717183E-4 6.73907427583031E-4 17 0.0 1.1231790459717183E-4 0.0 1.1231790459717183E-4 6.73907427583031E-4 18 0.0 1.1231790459717183E-4 0.0 2.2463580919434366E-4 0.0010108611413745465 19 0.0 1.1231790459717183E-4 0.0 2.2463580919434366E-4 0.0010108611413745465 20 0.0 1.1231790459717183E-4 0.0 3.369537137915155E-4 0.0010108611413745465 21 0.0 1.1231790459717183E-4 0.0 5.615895229858592E-4 0.0011231790459717184 22 0.0 1.1231790459717183E-4 0.0 0.0011231790459717184 0.0011231790459717184 23 0.0 1.1231790459717183E-4 0.0 0.0015724506643604056 0.0011231790459717184 24 0.0 1.1231790459717183E-4 0.0 0.002920265519526468 0.0011231790459717184 25 0.0 1.1231790459717183E-4 0.0 0.0035941729471094985 0.0011231790459717184 26 0.0 1.1231790459717183E-4 0.0 0.004717351993081217 0.0011231790459717184 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 35 0.0020631002 22.863003 5 TACCGTC 175 0.0 20.119442 7 CGTGAGA 40 0.004484795 19.998386 12 ATACCGT 180 0.0 19.560568 6 ACCGTCG 165 0.0 19.39891 8 CCGTCGT 175 0.0 18.289373 9 CGTCGTA 185 0.0 18.163755 10 GCGACGC 45 0.008852868 17.776342 32 TCCTATA 65 2.0992261E-4 17.231314 2 ATCTAGG 75 3.2330507E-5 17.066246 1 TCTAGAT 180 0.0 16.889421 2 GTGTAGG 100 1.3138924E-6 15.999606 1 AGGGGCG 210 0.0 15.998708 32 GCTCGTT 60 0.002442641 15.998708 12 TTTCGTT 265 0.0 15.696846 28 GTCGTAG 205 0.0 15.6102495 11 GTCCTAC 135 7.903509E-9 15.407028 1 TAATACT 125 5.119182E-8 15.363074 4 TCGTTCT 265 0.0 15.093121 30 TTCGTTC 265 0.0 15.093121 29 >>END_MODULE