##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062836_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1687988 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.238131432213972 32.0 32.0 32.0 32.0 32.0 2 31.323918179513125 32.0 32.0 32.0 32.0 32.0 3 31.39158216764574 32.0 32.0 32.0 32.0 32.0 4 31.49138500984604 32.0 32.0 32.0 32.0 32.0 5 31.420638653829293 32.0 32.0 32.0 32.0 32.0 6 34.94799963032913 36.0 36.0 36.0 36.0 36.0 7 34.97712898432927 36.0 36.0 36.0 36.0 36.0 8 34.91653317440645 36.0 36.0 36.0 36.0 36.0 9 35.013601400009954 36.0 36.0 36.0 36.0 36.0 10 34.86386040659057 36.0 36.0 36.0 32.0 36.0 11 35.03132723692349 36.0 36.0 36.0 36.0 36.0 12 34.93488223849933 36.0 36.0 36.0 32.0 36.0 13 34.9835834141001 36.0 36.0 36.0 36.0 36.0 14 34.93515889923388 36.0 36.0 36.0 32.0 36.0 15 34.90628724848755 36.0 36.0 36.0 32.0 36.0 16 34.913276634668016 36.0 36.0 36.0 32.0 36.0 17 34.8736205470655 36.0 36.0 36.0 32.0 36.0 18 34.87220584506525 36.0 36.0 36.0 32.0 36.0 19 34.86991969137221 36.0 36.0 36.0 32.0 36.0 20 34.85284077848895 36.0 36.0 36.0 32.0 36.0 21 34.84258655867222 36.0 36.0 36.0 32.0 36.0 22 34.82665161126738 36.0 36.0 36.0 32.0 36.0 23 34.76836861399489 36.0 36.0 36.0 32.0 36.0 24 34.74941291051832 36.0 36.0 36.0 32.0 36.0 25 34.73643473768771 36.0 36.0 36.0 32.0 36.0 26 34.664994656360115 36.0 36.0 36.0 32.0 36.0 27 34.653585807482045 36.0 36.0 36.0 32.0 36.0 28 34.6204493159904 36.0 36.0 36.0 32.0 36.0 29 34.589210942257886 36.0 36.0 36.0 32.0 36.0 30 34.56938378708853 36.0 36.0 36.0 32.0 36.0 31 34.56641812619521 36.0 36.0 36.0 32.0 36.0 32 34.5380885409138 36.0 36.0 36.0 32.0 36.0 33 34.502250608416645 36.0 36.0 36.0 32.0 36.0 34 34.49691881695841 36.0 36.0 36.0 32.0 36.0 35 34.465717173344835 36.0 36.0 36.0 32.0 36.0 36 34.43718024061783 36.0 36.0 36.0 32.0 36.0 37 34.429740021848495 36.0 36.0 36.0 32.0 36.0 38 34.00892008710962 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 8.0 21 29.0 22 123.0 23 377.0 24 1035.0 25 2699.0 26 5831.0 27 11074.0 28 19306.0 29 30682.0 30 46193.0 31 66655.0 32 95304.0 33 152293.0 34 374459.0 35 881917.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.94471039908996 18.263401744241158 11.989880557398806 26.802007299270077 2 15.956333812799617 20.718689943293437 36.255707978966676 27.06926826494027 3 17.676310495098306 24.736491017708655 28.768806413315733 28.818392073877302 4 12.146953738387795 16.148169387560447 35.88285928742342 35.822017586628334 5 14.438855275544181 36.66473734691085 32.99966172725264 15.89674565029233 6 34.28699391642234 35.84174522671087 16.452081680723847 13.419179176142945 7 30.19305870197822 30.481864757011916 21.04261651769211 18.282460023317757 8 28.312939662618742 32.448745276792685 19.381234663276345 19.85708039731223 9 27.779186478996067 13.828008640209678 18.199715389692177 40.19308949110208 10 16.03685112569395 26.312322235854552 31.054259496996707 26.59656714145479 11 37.971456518557886 20.866399941702053 22.004335613707365 19.1578079260327 12 25.099823221073187 23.613020028625865 28.086640631664757 23.200516118636198 13 29.610933253079995 18.993677680173082 25.031753780240145 26.363635286506774 14 24.04815674045076 19.559321511764303 24.659002315182335 31.733519432602602 15 25.544257423630974 26.695272715208873 22.041092709189876 25.719377151970274 16 26.23835373139722 25.383370843495833 23.171031530456098 25.207243894650848 17 24.502129162055656 25.515465749756515 24.650886143740358 25.331518944447474 18 25.672161176501255 24.07955506792702 25.71019462223665 24.53808913333507 19 25.935966369429163 24.62896655663429 25.028910158129086 24.406156915807458 20 26.205281080197253 23.598627478394395 24.505446721185223 25.690644720223126 21 27.56523310337473 23.90252283047539 23.873494136500028 24.658749929649847 22 26.310791308942953 23.74116403671116 24.55284042303618 25.395204231309705 23 24.522685049147384 23.509583029223023 25.232170447113244 26.735561474516345 24 25.175475181103184 24.677367374649585 24.775827790244954 25.371329654002277 25 25.228215620143995 23.956108666713664 24.896696479297532 25.91897923384481 26 25.086878682643103 24.885988390898977 25.246477162725284 24.780655763732636 27 25.967276979785375 24.142084116811397 24.328519312363966 25.562119591039263 28 24.89241629679832 24.08784896575094 25.430808749825236 25.588925987625505 29 24.960070806190565 24.29235278923784 25.258295675087737 25.48928072948386 30 24.755863193340236 24.560127204695767 25.614340860243086 25.069668741720914 31 25.597812306722563 24.281570722066746 24.170491733353554 25.95012523785714 32 25.22073616637085 24.28471055481437 24.272743645097 26.221809633717776 33 24.760128626506823 23.854257257753016 25.089040917352495 26.29657319838767 34 25.676900546686348 24.002718028801155 25.183354384035905 25.13702704047659 35 26.460318438282737 23.833937208084418 25.053851093728152 24.651893259904693 36 25.03661163467987 24.77191780984225 24.50384718374775 25.68762337173013 37 26.21428588354894 24.559297814913375 24.406867821335222 24.819548480202467 38 25.034079053926362 24.225186568379968 25.067313907038386 25.673420470655284 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 301.0 1 244.5 2 188.0 3 188.0 4 538.5 5 889.0 6 889.0 7 1055.0 8 1221.0 9 1144.0 10 1067.0 11 1067.0 12 1478.0 13 1889.0 14 2437.5 15 2986.0 16 2986.0 17 4908.0 18 6830.0 19 6830.0 20 8003.0 21 9176.0 22 9879.5 23 10583.0 24 10583.0 25 12391.5 26 14200.0 27 14200.0 28 17962.5 29 21725.0 30 27084.0 31 32443.0 32 32443.0 33 43365.0 34 54287.0 35 54287.0 36 60284.5 37 66282.0 38 76705.5 39 87129.0 40 87129.0 41 94014.0 42 100899.0 43 116010.0 44 131121.0 45 131121.0 46 135000.0 47 138879.0 48 138879.0 49 149491.0 50 160103.0 51 161285.0 52 162467.0 53 162467.0 54 155152.5 55 147838.0 56 147838.0 57 145060.5 58 142283.0 59 127513.0 60 112743.0 61 112743.0 62 107696.5 63 102650.0 64 84131.5 65 65613.0 66 65613.0 67 55290.0 68 44967.0 69 44967.0 70 36188.5 71 27410.0 72 21380.0 73 15350.0 74 15350.0 75 11455.0 76 7560.0 77 7560.0 78 7441.5 79 7323.0 80 5692.0 81 4061.0 82 4061.0 83 3866.5 84 3672.0 85 3672.0 86 2320.0 87 968.0 88 825.5 89 683.0 90 683.0 91 409.0 92 135.0 93 82.0 94 29.0 95 29.0 96 23.0 97 17.0 98 17.0 99 19.0 100 21.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00876783484242779 2 0.0 3 0.0 4 5.924212731370128E-5 5 5.924212731370128E-5 6 5.924212731370128E-5 7 2.3696850925480513E-4 8 0.002725137856430259 9 0.003909980402704284 10 4.1469489119590896E-4 11 0.006338907622566037 12 2.3696850925480513E-4 13 0.0 14 0.0 15 0.0 16 5.924212731370128E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.7772638194110384E-4 22 0.0 23 2.3696850925480513E-4 24 0.0 25 5.924212731370128E-5 26 1.1848425462740256E-4 27 1.1848425462740256E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 5.924212731370128E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1687988.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.108188160447575 #Duplication Level Percentage of deduplicated Percentage of total 1 78.46418958462473 40.88626754732657 2 13.215205278803785 13.772408064936956 3 3.8526670542171995 6.0226649934212135 4 1.5788633090617499 3.2908682555286632 5 0.804165553536283 2.095180498790956 6 0.4837078920047394 1.5123085110765853 7 0.316507423156922 1.1544839852027506 8 0.21433184188828716 0.8934755156712134 9 0.1533524324395178 0.7191825663978647 >10 0.7488043325409957 6.903947469939192 >50 0.06713755055326308 2.4964803061694356 >100 0.08053322919140471 9.57091869816896 >500 0.013422003373162326 4.887763761226632 >1k 0.007112514608000548 5.7940498261430635 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4281 0.2536155470299552 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3080 0.18246575212619995 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2634 0.15604376334428918 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2452 0.14526169617319554 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2391 0.14164792640705975 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2249 0.13323554432851417 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2201 0.13039192221745652 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2179 0.1290885954165551 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2143 0.12695587883326184 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2142 0.12689663670594814 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2107 0.12482316224996859 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2083 0.12340135119443976 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2047 0.12126863461114651 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2008 0.11895819164591218 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1958 0.1159960852802271 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1803 0.1068135555466034 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1701 0.10077085856060589 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.924212731370128E-5 2 0.0 0.0 0.0 0.0 5.924212731370128E-5 3 0.0 0.0 0.0 1.1848425462740256E-4 5.924212731370128E-5 4 0.0 0.0 0.0 1.1848425462740256E-4 5.924212731370128E-5 5 0.0 0.0 0.0 1.1848425462740256E-4 5.924212731370128E-5 6 0.0 0.0 5.924212731370128E-5 1.1848425462740256E-4 5.924212731370128E-5 7 0.0 0.0 5.924212731370128E-5 1.1848425462740256E-4 5.924212731370128E-5 8 0.0 0.0 5.924212731370128E-5 1.1848425462740256E-4 5.924212731370128E-5 9 0.0 0.0 5.924212731370128E-5 1.7772638194110384E-4 5.924212731370128E-5 10 0.0 0.0 5.924212731370128E-5 1.7772638194110384E-4 5.924212731370128E-5 11 0.0 0.0 1.1848425462740256E-4 1.7772638194110384E-4 5.924212731370128E-5 12 0.0 0.0 1.1848425462740256E-4 1.7772638194110384E-4 5.924212731370128E-5 13 0.0 0.0 1.1848425462740256E-4 1.7772638194110384E-4 1.1848425462740256E-4 14 0.0 0.0 1.1848425462740256E-4 1.7772638194110384E-4 1.1848425462740256E-4 15 0.0 0.0 1.1848425462740256E-4 1.7772638194110384E-4 1.7772638194110384E-4 16 0.0 0.0 1.1848425462740256E-4 2.3696850925480513E-4 1.7772638194110384E-4 17 0.0 0.0 1.1848425462740256E-4 2.3696850925480513E-4 1.7772638194110384E-4 18 0.0 0.0 1.1848425462740256E-4 2.3696850925480513E-4 1.7772638194110384E-4 19 0.0 0.0 1.1848425462740256E-4 2.3696850925480513E-4 1.7772638194110384E-4 20 0.0 0.0 1.1848425462740256E-4 2.962106365685064E-4 1.7772638194110384E-4 21 0.0 0.0 1.1848425462740256E-4 4.1469489119590896E-4 1.7772638194110384E-4 22 0.0 0.0 1.1848425462740256E-4 5.331791458233115E-4 1.7772638194110384E-4 23 0.0 0.0 1.1848425462740256E-4 8.886319097055192E-4 1.7772638194110384E-4 24 0.0 0.0 1.1848425462740256E-4 0.0015402953101562333 1.7772638194110384E-4 25 0.0 0.0 1.1848425462740256E-4 0.001954990201352142 1.7772638194110384E-4 26 0.0 0.0 1.1848425462740256E-4 0.002369685092548051 1.7772638194110384E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 30 8.4140454E-4 26.669086 5 AACGTAG 45 0.008847321 17.77939 8 ACCGTCG 490 0.0 17.634253 8 AACCGCT 65 2.0996816E-4 17.232332 7 CGTCGTA 505 0.0 17.10945 10 TACCGTC 515 0.0 17.08893 7 GTATTAC 110 2.0200787E-7 16.000504 1 GTATATA 190 0.0 16.000504 1 GCGACGC 110 2.0214429E-7 15.999557 32 ATACCGT 555 0.0 15.857293 6 CCGTCGT 555 0.0 15.856824 9 GTCGTAG 560 0.0 15.429058 11 CGTCTTA 135 7.91988E-9 15.40698 15 GGTCTAT 105 2.1855867E-6 15.238576 1 AGGGGCG 455 0.0 15.120459 32 TACGCTA 520 0.0 15.077845 9 GTATCAA 3355 0.0 14.688987 1 GTGTAGG 230 0.0 14.609155 1 GTATTAG 455 0.0 14.4180355 1 ATACGCT 545 0.0 14.386626 8 >>END_MODULE