##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062835_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1823543 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.200443312825637 32.0 32.0 32.0 32.0 32.0 2 31.27859008534485 32.0 32.0 32.0 32.0 32.0 3 31.368658156127932 32.0 32.0 32.0 32.0 32.0 4 31.464338378639823 32.0 32.0 32.0 32.0 32.0 5 31.390542476925415 32.0 32.0 32.0 32.0 32.0 6 34.90190524709316 36.0 36.0 36.0 36.0 36.0 7 34.9276233135166 36.0 36.0 36.0 36.0 36.0 8 34.86150093526722 36.0 36.0 36.0 32.0 36.0 9 34.97523173295063 36.0 36.0 36.0 36.0 36.0 10 34.824057343314635 36.0 36.0 36.0 32.0 36.0 11 34.99617722203425 36.0 36.0 36.0 36.0 36.0 12 34.90369955630331 36.0 36.0 36.0 32.0 36.0 13 34.95714935156451 36.0 36.0 36.0 36.0 36.0 14 34.89731966835989 36.0 36.0 36.0 32.0 36.0 15 34.86869955904522 36.0 36.0 36.0 32.0 36.0 16 34.884467215744294 36.0 36.0 36.0 32.0 36.0 17 34.84497651001375 36.0 36.0 36.0 32.0 36.0 18 34.84929009077384 36.0 36.0 36.0 32.0 36.0 19 34.84075505759941 36.0 36.0 36.0 32.0 36.0 20 34.822927674313135 36.0 36.0 36.0 32.0 36.0 21 34.817734487204305 36.0 36.0 36.0 32.0 36.0 22 34.805795640684096 36.0 36.0 36.0 32.0 36.0 23 34.75286845443184 36.0 36.0 36.0 32.0 36.0 24 34.732771862248384 36.0 36.0 36.0 32.0 36.0 25 34.7106089628816 36.0 36.0 36.0 32.0 36.0 26 34.64865319874552 36.0 36.0 36.0 32.0 36.0 27 34.63931642960983 36.0 36.0 36.0 32.0 36.0 28 34.61338778411038 36.0 36.0 36.0 32.0 36.0 29 34.57978890544396 36.0 36.0 36.0 32.0 36.0 30 34.55640420872993 36.0 36.0 36.0 32.0 36.0 31 34.54655415309647 36.0 36.0 36.0 32.0 36.0 32 34.51912787359552 36.0 36.0 36.0 32.0 36.0 33 34.49130730671007 36.0 36.0 36.0 32.0 36.0 34 34.47697696188135 36.0 36.0 36.0 32.0 36.0 35 34.453276396553306 36.0 36.0 36.0 32.0 36.0 36 34.425162993140276 36.0 36.0 36.0 32.0 36.0 37 34.42107041073339 36.0 36.0 36.0 32.0 36.0 38 34.00321133090912 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 8.0 21 36.0 22 139.0 23 431.0 24 1207.0 25 2958.0 26 6315.0 27 12367.0 28 21723.0 29 33662.0 30 51107.0 31 73416.0 32 105488.0 33 168395.0 34 411239.0 35 935052.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.82102469041012 18.666048766576356 12.120073709265212 26.392852833748314 2 15.740292386853504 20.50069562384874 37.104033192526856 26.6549787967709 3 18.156522769136785 24.289419004651933 28.881249304239056 28.672808921972226 4 11.743202781403204 16.370301720828717 36.495552606468735 35.390942891299346 5 13.901023392935288 37.16953050711198 33.460375467085484 15.469070632867243 6 34.05880869078825 36.527304035008825 16.4440593570747 12.969827917128224 7 29.912933038448863 30.785247806600243 20.61875287558972 18.683066279361178 8 27.8469246402785 33.53759321390693 18.995017258077077 19.620464887737494 9 27.02810901401283 14.048364877552274 18.61443444154887 40.309091666886026 10 15.61164844095742 26.81912978339182 31.632943483575477 25.936278292075286 11 37.62117127294823 21.33607026672487 22.17217672853467 18.870581731792228 12 24.520066793343698 24.091119720762148 28.753821560869408 22.634991925024746 13 29.272984714330054 19.636168810301733 25.470321978483586 25.620524496884627 14 23.281681080929907 20.1821072298347 25.233323517266683 31.30288817196871 15 25.01602649348 27.76435762688349 22.339917402550967 24.87969847708554 16 25.554703124631555 26.039857573964532 23.93472487350175 24.470714427902166 17 23.672817147717385 26.298858869793584 25.22720879079901 24.801115191690023 18 24.521768886173785 25.18037688170775 26.593230869795775 23.70462336232269 19 25.22978619094806 24.93333033550621 25.80207870063936 24.03480477290637 20 25.491364886926167 24.616913338484476 25.208070223734786 24.683651550854574 21 26.977183403060312 24.298987519337377 24.65291430244782 24.070914775154492 22 25.581368567326663 24.58725930085515 25.519456091496657 24.311916040321528 23 24.317041177141554 24.454192294531065 25.986764176852006 25.242002351475374 24 24.691712781107984 25.23439260823573 25.59605120361845 24.477843407037838 25 24.75193880919661 24.72561641026091 25.696145194352532 24.826299586189954 26 24.16817152104447 25.903913425677377 26.18139522895813 23.74651982432002 27 24.954278566504875 25.031984439083693 25.403404252052187 24.61033274235924 28 24.077468971118314 25.181693000932796 26.212269192445696 24.528568835503194 29 24.107136491982914 24.96535590331569 26.120360199896574 24.807147404804823 30 24.06672066411376 25.38124957843056 26.178982343712214 24.373047413743464 31 24.861163131332795 25.15081903744524 25.11511930346584 24.87289852775613 32 24.333344483787876 25.313304923437506 25.112487065015742 25.240863527758872 33 24.083556022534154 24.949014089604688 25.695747234915768 25.271682652945394 34 24.825463397353396 25.002262079918047 25.99220309035762 24.18007143237094 35 25.26663752924938 24.997655662630386 25.855491205855852 23.880215602264382 36 23.980350339970048 25.63509607396151 25.41267192492856 24.97188166113988 37 25.192989690947787 25.302666293035042 25.119890235656634 24.38445378036054 38 24.20107450167065 25.14829647559723 25.678966714796413 24.971662307935706 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 49.0 2 65.0 3 65.0 4 255.0 5 445.0 6 445.0 7 695.0 8 945.0 9 1194.5 10 1444.0 11 1444.0 12 2001.5 13 2559.0 14 3602.0 15 4645.0 16 4645.0 17 6790.0 18 8935.0 19 8935.0 20 10805.5 21 12676.0 22 14104.5 23 15533.0 24 15533.0 25 18937.5 26 22342.0 27 22342.0 28 28820.5 29 35299.0 30 42309.5 31 49320.0 32 49320.0 33 61070.0 34 72820.0 35 72820.0 36 79175.0 37 85530.0 38 96454.0 39 107378.0 40 107378.0 41 112819.5 42 118261.0 43 131141.5 44 144022.0 45 144022.0 46 144076.0 47 144130.0 48 144130.0 49 152060.0 50 159990.0 51 161809.5 52 163629.0 53 163629.0 54 157088.0 55 150547.0 56 150547.0 57 144157.0 58 137767.0 59 123659.0 60 109551.0 61 109551.0 62 103322.0 63 97093.0 64 81276.0 65 65459.0 66 65459.0 67 55774.5 68 46090.0 69 46090.0 70 36910.5 71 27731.0 72 21406.0 73 15081.0 74 15081.0 75 11652.5 76 8224.0 77 8224.0 78 7635.5 79 7047.0 80 5515.5 81 3984.0 82 3984.0 83 3630.0 84 3276.0 85 3276.0 86 2123.5 87 971.0 88 758.0 89 545.0 90 545.0 91 322.0 92 99.0 93 73.5 94 48.0 95 48.0 96 33.0 97 18.0 98 18.0 99 14.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008938643070111316 2 0.0 3 0.0 4 1.645149031308831E-4 5 5.48383010436277E-5 6 1.645149031308831E-4 7 2.193532041745108E-4 8 0.0026870767511377575 9 0.0038935193740975674 10 0.001096766020872554 11 0.004990285394970121 12 4.387064083490216E-4 13 2.741915052181385E-4 14 1.096766020872554E-4 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.096766020872554E-4 22 5.48383010436277E-5 23 3.8386810730539395E-4 24 0.0 25 5.48383010436277E-5 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1823543.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.851529725046326 #Duplication Level Percentage of deduplicated Percentage of total 1 70.8657573653176 33.20169137689098 2 16.07739375672013 15.065009829884948 3 6.032884369646868 8.479495841168328 4 2.713920179494395 5.086052478439387 5 1.3924751809601974 3.2619796166072974 6 0.7699254053286692 2.164330980829469 7 0.4889742986818652 1.6036435722633962 8 0.3058827089699023 1.1464858265344855 9 0.23083879942386704 0.9733635785611183 >10 0.9234383239006896 7.54697619870941 >50 0.08426094775700557 2.7982254563949063 >100 0.09363748239130196 9.536778231889393 >500 0.014486716075036852 4.497903789882047 >1k 0.006006687153064061 4.3200006367441075 >5k 1.1777817947184434E-4 0.3180625852007081 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5764 0.3160879672154701 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3997 0.2191886892713799 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2436 0.1335861013422771 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2385 0.1307893479890521 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2373 0.13013128837652854 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2136 0.11713461102918878 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2043 0.11203464903213141 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2024 0.11099272131230248 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1938 0.10627662742255048 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1922 0.10539921460585246 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1918 0.10517986140167793 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1899 0.10413793368184902 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 5.483830104362771E-5 13 0.0 0.0 0.0 0.0 5.483830104362771E-5 14 0.0 0.0 0.0 0.0 5.483830104362771E-5 15 0.0 0.0 0.0 0.0 1.645149031308831E-4 16 0.0 0.0 0.0 0.0 2.1935320417451083E-4 17 0.0 0.0 0.0 0.0 2.1935320417451083E-4 18 0.0 0.0 0.0 5.483830104362771E-5 2.1935320417451083E-4 19 0.0 0.0 0.0 1.0967660208725542E-4 2.1935320417451083E-4 20 0.0 0.0 0.0 1.0967660208725542E-4 2.7419150521813856E-4 21 0.0 0.0 0.0 1.0967660208725542E-4 3.290298062617662E-4 22 0.0 0.0 0.0 1.645149031308831E-4 3.290298062617662E-4 23 0.0 0.0 0.0 6.032213114799047E-4 3.290298062617662E-4 24 0.0 0.0 0.0 0.0014257958271343203 3.290298062617662E-4 25 0.0 0.0 0.0 0.0018096639344397144 3.290298062617662E-4 26 0.0 0.0 0.0 0.0021935320417451084 3.290298062617662E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACCGT 40 0.004481158 20.002554 6 CTAGCGG 500 0.0 17.599352 29 TCTAGCG 510 0.0 17.254265 28 TAGCGGC 520 0.0 16.922453 30 CGCCGGT 575 0.0 16.141191 7 CCGGTCC 630 0.0 16.001604 9 CGGTCCA 600 0.0 16.001165 10 ACTATAC 110 2.0206608E-7 16.000288 3 CCTATAC 130 4.80577E-9 16.000288 3 TAACCCG 205 0.0 15.609181 28 GTATCAA 3880 0.0 15.464195 1 TGTAGGA 660 0.0 15.272584 2 AACCCGT 210 0.0 15.237534 29 ACCCGTT 210 0.0 15.237534 30 ACCGTCG 465 0.0 15.141303 8 ATCGTTT 350 0.0 15.085158 29 GCCGGTC 630 0.0 14.98563 8 CGTCGTA 470 0.0 14.9798155 10 ATACCGT 475 0.0 14.822946 6 CAAGACG 605 0.0 14.81059 4 >>END_MODULE