##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062834_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 997669 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.157589340753297 32.0 32.0 32.0 32.0 32.0 2 31.309160653483268 32.0 32.0 32.0 32.0 32.0 3 31.394158784125796 32.0 32.0 32.0 32.0 32.0 4 31.483564188122514 32.0 32.0 32.0 32.0 32.0 5 31.428491814419413 32.0 32.0 32.0 32.0 32.0 6 34.93067640670403 36.0 36.0 36.0 36.0 36.0 7 34.96139801878178 36.0 36.0 36.0 36.0 36.0 8 34.90290567312405 36.0 36.0 36.0 36.0 36.0 9 35.01455492753609 36.0 36.0 36.0 36.0 36.0 10 34.8682619185321 36.0 36.0 36.0 32.0 36.0 11 35.021131256959976 36.0 36.0 36.0 36.0 36.0 12 34.929482623996535 36.0 36.0 36.0 32.0 36.0 13 34.97444944164848 36.0 36.0 36.0 36.0 36.0 14 34.91338309599677 36.0 36.0 36.0 32.0 36.0 15 34.89243927595224 36.0 36.0 36.0 32.0 36.0 16 34.89395881800477 36.0 36.0 36.0 32.0 36.0 17 34.86519176199722 36.0 36.0 36.0 32.0 36.0 18 34.85899431575001 36.0 36.0 36.0 32.0 36.0 19 34.852707661559094 36.0 36.0 36.0 32.0 36.0 20 34.839772509720156 36.0 36.0 36.0 32.0 36.0 21 34.823441442001304 36.0 36.0 36.0 32.0 36.0 22 34.812471871933475 36.0 36.0 36.0 32.0 36.0 23 34.73692777865204 36.0 36.0 36.0 32.0 36.0 24 34.7238583137293 36.0 36.0 36.0 32.0 36.0 25 34.71048313619046 36.0 36.0 36.0 32.0 36.0 26 34.64441813868127 36.0 36.0 36.0 32.0 36.0 27 34.62297214807717 36.0 36.0 36.0 32.0 36.0 28 34.589674531332534 36.0 36.0 36.0 32.0 36.0 29 34.54543440760413 36.0 36.0 36.0 32.0 36.0 30 34.52459382821357 36.0 36.0 36.0 32.0 36.0 31 34.51521897543173 36.0 36.0 36.0 32.0 36.0 32 34.46174833536975 36.0 36.0 36.0 32.0 36.0 33 34.418837309769074 36.0 36.0 36.0 32.0 36.0 34 34.40431646167216 36.0 36.0 36.0 32.0 36.0 35 34.352471611326 36.0 36.0 36.0 32.0 36.0 36 34.319807471215405 36.0 36.0 36.0 32.0 36.0 37 34.31000161376168 36.0 36.0 36.0 32.0 36.0 38 33.892784079689754 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 8.0 20 7.0 21 28.0 22 82.0 23 257.0 24 710.0 25 1674.0 26 3674.0 27 6927.0 28 12153.0 29 19067.0 30 28565.0 31 40718.0 32 57727.0 33 90988.0 34 219913.0 35 515170.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.8030975114653 18.856827807433024 12.377615718116433 25.96245896298524 2 15.290642487638687 21.324607660456525 37.53800108051869 25.846748771386103 3 17.58088103368953 25.817981715378547 29.29919642687104 27.30194082406089 4 11.742795942934867 16.840488860511574 36.5632019501497 34.853513246403864 5 13.53875884687206 37.781869537892824 33.33309945482921 15.346272160405904 6 32.835339175618365 36.69824360584523 17.147570987972966 13.318846230563445 7 28.978092824838825 31.317357346762037 21.505837636719377 18.198712191679764 8 27.800158171862048 33.11605584729699 19.91071007939666 19.173075901444296 9 27.607744470562288 14.052615487938732 18.94628689424277 39.39335314725621 10 15.713168815027165 27.143315357937574 31.631517751538603 25.51199807549666 11 36.79978348469357 21.42609410396744 22.7929472143702 18.981175196968785 12 24.71448360473345 24.45547908819184 29.06794458265592 21.762092724418792 13 29.69016715998424 19.75649189559242 25.530462569173885 25.02287837524946 14 23.4428452723298 20.48825812970033 25.797233350941045 30.271663247028822 15 24.82627003545264 27.771535449131928 23.174118871088506 24.22807564432693 16 24.956874474399825 25.913003210483637 24.827172138254273 24.302950176862264 17 23.208098076616594 26.186240125733086 26.133316761370757 24.472345036279567 18 24.34905765339005 24.54832213890579 27.849416991006038 23.25320321669812 19 25.136994333792067 25.17588498790681 26.428003676570082 23.259117001731035 20 25.32393008101885 24.184874943493284 26.36926676081947 24.121928214668394 21 26.68263062514033 24.38656702056003 25.14864723995253 23.782155114347113 22 25.12115741794122 24.903550175458992 25.959411387945302 24.015881018654483 23 23.4184352093434 24.472394095424626 26.648771584105717 25.460399111126257 24 24.188984522922933 25.4394994732722 26.350422835629857 24.021093168175017 25 24.33442354127471 24.676621204026585 26.352728209456245 24.63622704524246 26 23.67458545870424 25.70321419228221 27.05205834800921 23.570142001004342 27 24.82837494198978 25.107124707693636 25.902278210508694 24.16222213980789 28 23.59810718785489 25.078157184396826 26.8251293765768 24.49860625117148 29 23.72770929035582 25.088481249793272 26.810395030816835 24.373414429034078 30 23.70666022498444 25.307992931523383 27.062783347984148 23.92256349550803 31 24.378025176686858 25.052497371372667 25.804951341577215 24.764526110363256 32 23.726005318397185 25.453832884453657 25.87010321058387 24.950058586565284 33 23.352534758522115 24.867866997972275 26.687909517084325 25.09168872642129 34 24.22256279387252 25.192223071980784 26.880859282988645 23.70435485115805 35 25.231915595252534 25.04568148353813 26.400038489719535 23.322364431489802 36 23.836162093840745 25.7579417622478 26.121188490371054 24.2847076535404 37 24.71944574748313 25.70464322800771 25.7592706190837 23.816640405425453 38 23.829670792287615 25.49966521929139 26.31667047554898 24.35399351287202 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 695.0 1 479.0 2 263.0 3 263.0 4 824.0 5 1385.0 6 1385.0 7 1555.5 8 1726.0 9 1667.5 10 1609.0 11 1609.0 12 2018.0 13 2427.0 14 3037.5 15 3648.0 16 3648.0 17 5571.0 18 7494.0 19 7494.0 20 8390.5 21 9287.0 22 9391.0 23 9495.0 24 9495.0 25 10722.0 26 11949.0 27 11949.0 28 15564.0 29 19179.0 30 23610.5 31 28042.0 32 28042.0 33 34743.0 34 41444.0 35 41444.0 36 44779.5 37 48115.0 38 53722.0 39 59329.0 40 59329.0 41 61364.0 42 63399.0 43 70750.0 44 78101.0 45 78101.0 46 81098.0 47 84095.0 48 84095.0 49 87490.5 50 90886.0 51 89320.5 52 87755.0 53 87755.0 54 82653.0 55 77551.0 56 77551.0 57 75370.0 58 73189.0 59 64749.0 60 56309.0 61 56309.0 62 53600.5 63 50892.0 64 42157.5 65 33423.0 66 33423.0 67 27870.0 68 22317.0 69 22317.0 70 17943.5 71 13570.0 72 10575.5 73 7581.0 74 7581.0 75 5620.5 76 3660.0 77 3660.0 78 3721.5 79 3783.0 80 2965.5 81 2148.0 82 2148.0 83 2083.0 84 2018.0 85 2018.0 86 1235.5 87 453.0 88 395.0 89 337.0 90 337.0 91 203.0 92 69.0 93 47.5 94 26.0 95 26.0 96 17.5 97 9.0 98 9.0 99 10.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009421962594808498 2 0.0 3 0.0 4 2.0046728925124464E-4 5 0.0 6 0.0 7 5.011682231281117E-4 8 0.0020046728925124466 9 0.005412616809783606 10 9.02102801630601E-4 11 0.004911448586655494 12 3.0070093387686694E-4 13 2.0046728925124464E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 5.011682231281117E-4 22 0.0 23 2.0046728925124464E-4 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 1.0023364462562232E-4 38 1.0023364462562232E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 997669.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.164662382925876 #Duplication Level Percentage of deduplicated Percentage of total 1 80.22604861941494 44.256428864062215 2 12.908721375541333 14.24210512953992 3 3.4120506142499387 5.646738605056583 4 1.2978202362773266 2.8637526067187125 5 0.5753961180612286 1.5870766294646916 6 0.33402451064539046 1.1055809614424996 7 0.20638890361195536 0.7969761931135024 8 0.141381706436218 0.6239419282140723 9 0.10281467666299114 0.5104563233511235 >10 0.5939350062956101 6.454560875051076 >50 0.08775974385382596 3.436411571787865 >100 0.098698623774487 11.230525330716077 >500 0.011675992331526146 4.245639742597015 >1k 0.0032838728432417284 2.9998052388846825 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4939 0.49505397080594865 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3803 0.3811885505112417 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2234 0.22392196209364026 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1644 0.1647841117645231 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1625 0.16287967251663626 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1470 0.14734345759966483 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1401 0.14042733612049688 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1290 0.1293014015670528 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1218 0.122084579154008 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1213 0.12158341093087988 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1194 0.11967897168299307 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1177 0.11797499972435747 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1158 0.11607056047647066 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1140 0.11426635487320944 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1093 0.1095553735758052 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1088 0.10905420535267708 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1084 0.1086532707741746 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1036 0.10384205583214472 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.0023364462562233E-4 0.0 8 0.0 0.0 0.0 1.0023364462562233E-4 0.0 9 0.0 0.0 0.0 1.0023364462562233E-4 0.0 10 0.0 0.0 0.0 1.0023364462562233E-4 0.0 11 0.0 0.0 0.0 2.0046728925124466E-4 0.0 12 0.0 0.0 0.0 2.0046728925124466E-4 1.0023364462562233E-4 13 0.0 0.0 0.0 3.00700933876867E-4 1.0023364462562233E-4 14 0.0 0.0 0.0 3.00700933876867E-4 1.0023364462562233E-4 15 0.0 0.0 0.0 4.0093457850248933E-4 1.0023364462562233E-4 16 0.0 0.0 0.0 4.0093457850248933E-4 1.0023364462562233E-4 17 0.0 0.0 0.0 4.0093457850248933E-4 1.0023364462562233E-4 18 0.0 0.0 0.0 5.011682231281117E-4 1.0023364462562233E-4 19 0.0 0.0 0.0 6.01401867753734E-4 1.0023364462562233E-4 20 0.0 0.0 0.0 9.021028016306009E-4 2.0046728925124466E-4 21 0.0 0.0 0.0 0.0011025700908818457 2.0046728925124466E-4 22 0.0 0.0 0.0 0.001904439247886824 2.0046728925124466E-4 23 0.0 0.0 0.0 0.003808878495773648 2.0046728925124466E-4 24 0.0 0.0 0.0 0.0057133177436604725 2.0046728925124466E-4 25 0.0 0.0 0.0 0.006615420545291074 2.0046728925124466E-4 26 0.0 0.0 0.0 0.008920794371680387 2.0046728925124466E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTGAA 50 2.7977736E-5 22.399334 11 ACCGTCG 260 0.0 20.308107 8 TACCGTC 270 0.0 19.555954 7 CGTCGTA 275 0.0 19.199429 10 ATACCGT 310 0.0 18.064884 6 CCGTCGT 295 0.0 17.89867 9 TAGCGGC 290 0.0 17.654646 30 CTAGCGG 290 0.0 17.654646 29 GGTTCGT 55 0.0013647465 17.454027 26 GTCGTAG 315 0.0 17.269327 11 CATCGTT 210 0.0 16.761406 28 GCGCAAG 270 0.0 16.596258 1 ATCGTTT 215 0.0 16.371605 29 TCTAGAT 225 0.0 16.355068 2 CGTATAT 245 0.0 16.326046 10 ATAGCGT 240 0.0 16.000326 6 AAGACGG 300 0.0 16.000326 5 CAAGACG 300 0.0 16.000326 4 AATAGCG 240 0.0 16.000326 5 TAGTGCT 60 0.0024412712 16.000326 4 >>END_MODULE