##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062833_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2345831 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.197176181915918 32.0 32.0 32.0 32.0 32.0 2 31.236557961762802 32.0 32.0 32.0 32.0 32.0 3 31.336507190841967 32.0 32.0 32.0 32.0 32.0 4 31.428718010802996 32.0 32.0 32.0 32.0 32.0 5 31.36213947211031 32.0 32.0 32.0 32.0 32.0 6 34.87148008530879 36.0 36.0 36.0 36.0 36.0 7 34.888223405692905 36.0 36.0 36.0 36.0 36.0 8 34.81931690731344 36.0 36.0 36.0 32.0 36.0 9 34.95146964977443 36.0 36.0 36.0 32.0 36.0 10 34.775370433761 36.0 36.0 36.0 32.0 36.0 11 34.954806207267275 36.0 36.0 36.0 36.0 36.0 12 34.85305676325362 36.0 36.0 36.0 32.0 36.0 13 34.916706275942296 36.0 36.0 36.0 32.0 36.0 14 34.851120562393454 36.0 36.0 36.0 32.0 36.0 15 34.82288877587516 36.0 36.0 36.0 32.0 36.0 16 34.837420939530595 36.0 36.0 36.0 32.0 36.0 17 34.80102658716677 36.0 36.0 36.0 32.0 36.0 18 34.7968647357802 36.0 36.0 36.0 32.0 36.0 19 34.79601556974906 36.0 36.0 36.0 32.0 36.0 20 34.78896774746348 36.0 36.0 36.0 32.0 36.0 21 34.78905769426698 36.0 36.0 36.0 32.0 36.0 22 34.766499376979844 36.0 36.0 36.0 32.0 36.0 23 34.70140815770616 36.0 36.0 36.0 32.0 36.0 24 34.68398789171087 36.0 36.0 36.0 32.0 36.0 25 34.66086303744814 36.0 36.0 36.0 32.0 36.0 26 34.59381515548222 36.0 36.0 36.0 32.0 36.0 27 34.58728228930388 36.0 36.0 36.0 32.0 36.0 28 34.55224609104407 36.0 36.0 36.0 32.0 36.0 29 34.514412589824246 36.0 36.0 36.0 32.0 36.0 30 34.492467274923044 36.0 36.0 36.0 32.0 36.0 31 34.50198714229627 36.0 36.0 36.0 32.0 36.0 32 34.46208912747764 36.0 36.0 36.0 32.0 36.0 33 34.425690085943955 36.0 36.0 36.0 32.0 36.0 34 34.42444234047551 36.0 36.0 36.0 32.0 36.0 35 34.389849055622506 36.0 36.0 36.0 32.0 36.0 36 34.36558643823873 36.0 36.0 36.0 32.0 36.0 37 34.373565273883756 36.0 36.0 36.0 32.0 36.0 38 33.93292995104933 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 6.0 21 40.0 22 192.0 23 624.0 24 1709.0 25 4169.0 26 8818.0 27 17000.0 28 29290.0 29 45701.0 30 68045.0 31 97703.0 32 140275.0 33 223494.0 34 541749.0 35 1167013.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.53048650510652 18.52633921491387 12.179424870439814 26.763749409539788 2 16.029586104028805 20.43646792970167 36.11798974435925 27.415956221910275 3 17.696884387664756 24.106553285381597 28.765925593105386 29.43063673384826 4 12.266447270262551 16.068981980791445 35.6533934684099 36.0111772805361 5 14.57658288256912 36.53033828950167 33.03298489959421 15.86009392833499 6 34.78746097326829 35.614162675183344 16.205280182519775 13.39309616902859 7 30.638979392698246 30.34407172931927 20.611735176499124 18.405213701483365 8 28.3643024738935 32.64216191145275 19.109411981365653 19.88412363328809 9 27.453506440357156 13.98632849551637 18.32169173677558 40.238473327350896 10 16.024803467983855 26.159166954059614 30.968142651486634 26.847886926469894 11 38.20975451918236 20.82308951227404 21.83437686376439 19.13277910477921 12 24.95546346768112 23.56507960731972 27.923116240029632 23.556340684969523 13 29.226043330524092 18.849200005627008 25.235769529663077 26.688987134185826 14 23.71547651983455 19.568459961523228 24.50180767497744 32.21425584366478 15 25.349907985698884 26.870435253008424 21.763588255078904 26.01606850621379 16 26.404172510369467 25.53876453110413 22.90647659890103 25.150586359625375 17 24.573424087242433 25.79303453658853 24.457345819029587 25.17619555713945 18 25.723890595699352 24.342205384786883 25.420501306360094 24.513402713153674 19 25.919684751373822 24.78128219807821 24.889559392812185 24.409473657735788 20 26.074427356446396 23.862759081962853 24.34109703554945 25.721716526041305 21 27.429054961356965 23.959153050306288 23.918826172399534 24.692965815937214 22 26.213653072194887 23.858112540928992 24.57517186873223 25.353062518143894 23 24.568147850693105 23.57519270397719 25.289983144529906 26.566676300799802 24 25.16485629186416 24.72539581922142 24.586340618740223 25.523407270174193 25 25.225740995724326 24.179458869568553 24.827246646176405 25.767553488530716 26 25.190540316451028 25.023307325470018 25.08912627476257 24.69702608331639 27 25.967226951654638 24.216077038830605 24.244297327598336 25.572398681916418 28 24.896081601786317 24.269864282635876 25.343343147907927 25.490710967669877 29 24.86811709794951 24.469495031824543 25.283023372101397 25.379364498124545 30 24.818454526349086 24.653353118788182 25.446163854088383 25.08202850077435 31 25.624906483033094 24.469580289458193 24.12479841898244 25.780714808526273 32 25.28251182629951 24.313345675796764 24.198290499187706 26.205851998716017 33 24.819648133220166 23.971547822498724 24.91624503214426 26.292559012136852 34 25.75854782377759 24.10578596667876 25.021666096151 25.114000113392652 35 26.36328021924853 23.917963399750448 24.909296535001882 24.809459845999136 36 24.98632680700357 24.71968355776695 24.57090898704979 25.723080648179685 37 26.197965667603505 24.518219769454834 24.333594363788354 24.950220199153307 38 25.09029849123829 24.069892502912612 25.07533577653292 25.764473229316177 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 67.0 1 89.0 2 111.0 3 111.0 4 389.0 5 667.0 6 667.0 7 846.5 8 1026.0 9 1062.5 10 1099.0 11 1099.0 12 1457.5 13 1816.0 14 2711.5 15 3607.0 16 3607.0 17 5683.5 18 7760.0 19 7760.0 20 9634.0 21 11508.0 22 13432.0 23 15356.0 24 15356.0 25 18253.5 26 21151.0 27 21151.0 28 26826.0 29 32501.0 30 39809.5 31 47118.0 32 47118.0 33 62079.0 34 77040.0 35 77040.0 36 86171.5 37 95303.0 38 109165.5 39 123028.0 40 123028.0 41 132601.5 42 142175.0 43 162420.5 44 182666.0 45 182666.0 46 185237.5 47 187809.0 48 187809.0 49 202605.5 50 217402.0 51 220742.5 52 224083.0 53 224083.0 54 214993.0 55 205903.0 56 205903.0 57 200272.0 58 194641.0 59 174824.0 60 155007.0 61 155007.0 62 147715.5 63 140424.0 64 116558.5 65 92693.0 66 92693.0 67 78482.0 68 64271.0 69 64271.0 70 51982.0 71 39693.0 72 31173.0 73 22653.0 74 22653.0 75 17208.0 76 11763.0 77 11763.0 78 11406.0 79 11049.0 80 8636.0 81 6223.0 82 6223.0 83 5819.0 84 5415.0 85 5415.0 86 3472.0 87 1529.0 88 1236.5 89 944.0 90 944.0 91 566.0 92 188.0 93 136.5 94 85.0 95 85.0 96 54.0 97 23.0 98 23.0 99 28.5 100 34.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00865364981535328 2 0.0 3 0.0 4 4.2628816824400394E-5 5 0.0 6 1.2788645047320118E-4 7 5.115458018928047E-4 8 0.0023445849253420216 9 0.0032397900786544304 10 0.0012788645047320118 11 0.004603912217035242 12 1.7051526729760158E-4 13 8.525763364880079E-5 14 0.0 15 0.0 16 4.2628816824400394E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 4.2628816824400394E-5 22 0.0 23 2.1314408412200197E-4 24 0.0 25 4.2628816824400394E-5 26 8.525763364880079E-5 27 4.2628816824400394E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2345831.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.492549637579984 #Duplication Level Percentage of deduplicated Percentage of total 1 79.05140933476353 39.91507209756202 2 12.475344012085548 12.598238535522318 3 3.6049592108414594 5.460707456845908 4 1.546435404330967 3.1233386565796972 5 0.8512833386279571 2.149173311565847 6 0.5446890086973615 1.6501642085217454 7 0.36302860590787484 1.2831167932565386 8 0.2569844973664725 1.0380641991492126 9 0.19305955741399175 0.8773262357161683 >10 0.9441428575296639 8.345478882851557 >50 0.07007499764251882 2.486834628614485 >100 0.07462666079563768 8.281267536797564 >500 0.015210248246408934 5.25074613298941 >1k 0.008752265750726893 7.540471324027513 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4022 0.17145310126773838 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3563 0.1518864743453386 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3287 0.14012092090180409 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3276 0.13965200391673568 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3189 0.13594329685301285 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3121 0.13304453730895363 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3042 0.12967686077982601 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2905 0.12383671287488314 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2892 0.12328253825616593 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2888 0.12311202298886835 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2775 0.1182949666877111 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2742 0.11688821573250588 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2645 0.11275322050053904 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2632 0.11219904588182185 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2500 0.10657204206100097 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2437 0.10388642660106376 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.5577290094640237E-4 2 0.0 0.0 0.0 0.0 2.5577290094640237E-4 3 0.0 0.0 0.0 0.0 2.5577290094640237E-4 4 0.0 0.0 0.0 0.0 2.5577290094640237E-4 5 0.0 0.0 0.0 0.0 2.5577290094640237E-4 6 0.0 0.0 0.0 0.0 2.9840171777080276E-4 7 0.0 0.0 0.0 0.0 3.4103053459520315E-4 8 0.0 0.0 0.0 0.0 3.4103053459520315E-4 9 0.0 0.0 0.0 0.0 3.4103053459520315E-4 10 0.0 0.0 0.0 0.0 3.4103053459520315E-4 11 0.0 0.0 0.0 0.0 3.4103053459520315E-4 12 4.2628816824400394E-5 0.0 0.0 4.2628816824400394E-5 6.394322523660059E-4 13 4.2628816824400394E-5 0.0 0.0 8.525763364880079E-5 7.246898860148067E-4 14 4.2628816824400394E-5 0.0 0.0 8.525763364880079E-5 7.246898860148067E-4 15 4.2628816824400394E-5 8.525763364880079E-5 0.0 1.2788645047320118E-4 8.952051533124083E-4 16 4.2628816824400394E-5 1.2788645047320118E-4 0.0 1.7051526729760158E-4 8.952051533124083E-4 17 4.2628816824400394E-5 1.2788645047320118E-4 0.0 2.1314408412200197E-4 9.378339701368087E-4 18 4.2628816824400394E-5 1.2788645047320118E-4 0.0 2.1314408412200197E-4 9.378339701368087E-4 19 4.2628816824400394E-5 1.2788645047320118E-4 0.0 3.4103053459520315E-4 9.378339701368087E-4 20 4.2628816824400394E-5 1.2788645047320118E-4 0.0 3.8365935141960355E-4 0.0011509780542588105 21 4.2628816824400394E-5 1.2788645047320118E-4 0.0 4.6891698506840434E-4 0.0011509780542588105 22 8.525763364880079E-5 1.2788645047320118E-4 0.0 5.541746187172051E-4 0.001193606871083211 23 8.525763364880079E-5 1.2788645047320118E-4 0.0 7.673187028392071E-4 0.001193606871083211 24 8.525763364880079E-5 1.2788645047320118E-4 0.0 0.001193606871083211 0.0012362356879076113 25 8.525763364880079E-5 1.2788645047320118E-4 0.0 0.0014493797720296134 0.0012362356879076113 26 8.525763364880079E-5 1.2788645047320118E-4 0.0 0.0019182967570980176 0.0012788645047320118 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTAAT 55 0.0013656218 17.453777 22 TCTAGCG 675 0.0 17.065916 28 ATCGTTT 565 0.0 16.70723 29 CTAGCGG 695 0.0 16.574812 29 GTATCAA 3255 0.0 16.418146 1 CATCGTT 585 0.0 16.136044 28 TAATACG 100 1.3149365E-6 16.001003 4 CGTTTAT 600 0.0 15.732641 31 TAGCGGC 765 0.0 15.058161 30 AAGACGG 790 0.0 14.988919 5 TACCGTC 750 0.0 14.935224 7 ACCGTCG 730 0.0 14.905996 8 CGTCGTA 735 0.0 14.803332 10 GGTATCA 1595 0.0 14.746376 1 CTATACT 240 0.0 14.667586 4 CAAGACG 820 0.0 14.635063 4 TCGTTTA 660 0.0 14.544814 30 GCATCGT 660 0.0 14.544814 27 ACGAACG 375 0.0 14.506339 15 ATACCGT 800 0.0 14.401823 6 >>END_MODULE