##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062831_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1774625 Sequences flagged as poor quality 0 Sequence length 38 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26540705782912 32.0 32.0 32.0 32.0 32.0 2 31.333167288863844 32.0 32.0 32.0 32.0 32.0 3 31.395841374938367 32.0 32.0 32.0 32.0 32.0 4 31.480423751496794 32.0 32.0 32.0 32.0 32.0 5 31.436574487567796 32.0 32.0 32.0 32.0 32.0 6 34.94588659575967 36.0 36.0 36.0 36.0 36.0 7 34.97830020426851 36.0 36.0 36.0 36.0 36.0 8 34.894935549764035 36.0 36.0 36.0 36.0 36.0 9 35.01573008382053 36.0 36.0 36.0 36.0 36.0 10 34.89117024723533 36.0 36.0 36.0 32.0 36.0 11 35.034195956892304 36.0 36.0 36.0 36.0 36.0 12 34.96206635204621 36.0 36.0 36.0 36.0 36.0 13 35.007704162851304 36.0 36.0 36.0 36.0 36.0 14 34.95969514686201 36.0 36.0 36.0 36.0 36.0 15 34.930549834472075 36.0 36.0 36.0 36.0 36.0 16 34.95743776854265 36.0 36.0 36.0 36.0 36.0 17 34.94891033316898 36.0 36.0 36.0 36.0 36.0 18 34.94489596393604 36.0 36.0 36.0 36.0 36.0 19 34.92089990843136 36.0 36.0 36.0 36.0 36.0 20 34.90928844121998 36.0 36.0 36.0 36.0 36.0 21 34.89484313587378 36.0 36.0 36.0 32.0 36.0 22 34.87503895189124 36.0 36.0 36.0 32.0 36.0 23 34.836079735155316 36.0 36.0 36.0 32.0 36.0 24 34.82173529618934 36.0 36.0 36.0 32.0 36.0 25 34.80585813904346 36.0 36.0 36.0 32.0 36.0 26 34.74043248573642 36.0 36.0 36.0 32.0 36.0 27 34.69815087694583 36.0 36.0 36.0 32.0 36.0 28 34.662229485102486 36.0 36.0 36.0 32.0 36.0 29 34.63601267873494 36.0 36.0 36.0 32.0 36.0 30 34.59413002747059 36.0 36.0 36.0 32.0 36.0 31 34.58662139888709 36.0 36.0 36.0 32.0 36.0 32 34.572842149749945 36.0 36.0 36.0 32.0 36.0 33 34.57638768753962 36.0 36.0 36.0 32.0 36.0 34 34.5594573501444 36.0 36.0 36.0 32.0 36.0 35 34.549505951961685 36.0 36.0 36.0 32.0 36.0 36 34.50339198422202 36.0 36.0 36.0 32.0 36.0 37 34.45367387476227 36.0 36.0 36.0 32.0 36.0 38 34.098077622032825 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 5.0 21 19.0 22 85.0 23 309.0 24 925.0 25 2478.0 26 5436.0 27 10511.0 28 19014.0 29 30924.0 30 47294.0 31 68573.0 32 98840.0 33 156079.0 34 393660.0 35 940469.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.78259448444382 20.996668304712614 12.971858671199094 26.248878539644473 2 12.822941648484413 21.471308851903277 43.204081540653114 22.501667958959192 3 17.734169190674088 26.53811368599 30.26943720504332 25.458279918292597 4 10.607774158229663 18.201105248833134 39.928086134350785 31.263034458586414 5 11.377001550751032 40.031184070541144 35.84652298176966 12.74529139693817 6 30.24281777030953 39.62537395266488 18.433605334766877 11.698202942258721 7 27.15785511385248 32.09862838318717 22.81163132860481 17.93188517435554 8 24.036290379386614 39.81088429623995 20.074102249834468 16.078723074538974 9 26.67778313752716 14.676559161114067 20.480190967369648 38.16546673398913 10 14.831740779538977 29.170979813626975 34.57903216081478 21.418247246019273 11 34.525586645320274 21.696170103897405 26.43683796185939 17.341405288922925 12 24.526883562415758 24.78451676306311 32.450231486699096 18.23836818782204 13 29.668402623206518 22.472278603556138 26.03236069427743 21.826958078959912 14 20.06412622385011 23.872930900894556 27.20270479678805 28.860238078467283 15 21.493949425935057 35.16669718954709 22.401183348594774 20.938170035923083 16 20.734014228358102 28.174853842361063 30.050010565612457 21.04112136366838 17 20.41276325984363 30.235739945058814 28.44088187645277 20.910614918644786 18 20.83752905543425 27.133901528491933 32.57352961893358 19.45503979714024 19 24.079960555046842 26.089061069239982 27.3004155807565 22.530562794956683 20 24.631175600478976 27.62065225047545 27.895245474395995 19.852926674649574 21 23.279436409556514 26.450308854505355 26.255732206633297 24.014522529304834 22 24.13485898984799 29.74230034080459 26.67077645743549 19.45206421191193 23 20.8027399637782 29.867769023487817 28.537908354567904 20.791582658166078 24 23.712277241670776 26.988349651334786 28.90830457138832 20.391068535606113 25 21.969092061703176 28.649038529266747 28.753285905472985 20.628583503557092 26 19.678365670699822 30.31290008475035 29.60598977586238 20.40274446868745 27 21.339631008952324 29.150923886369107 28.409076181250892 21.10036892342768 28 20.3418186940903 29.58630696626048 27.551341832781574 22.52053250686765 29 21.7424526308375 27.721462280763543 27.035289145594138 23.500795942804817 30 20.259096992322323 28.131069944354444 28.702514615763892 22.907318447559344 31 23.537310699443545 26.913685989997887 27.82835810382475 21.720645206733817 32 21.20064802423047 29.181207297316337 27.998985701204482 21.619158977248716 33 20.04378389800662 29.5673733887441 29.84157216313306 20.547270550116224 34 21.66474607311404 28.926618299640772 29.326984574205817 20.081651053039373 35 20.832570261322815 29.35662463900824 29.266633795872366 20.544171303796578 36 19.91029090652955 28.866380221173486 29.89448475029936 21.328844121997605 37 21.241670775515953 28.350496583785308 26.89238571529196 23.515446925406778 38 21.193064667819588 30.170408024690314 27.189831305015204 21.44669600247489 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4.0 1 19.5 2 35.0 3 35.0 4 134.0 5 233.0 6 233.0 7 319.5 8 406.0 9 522.5 10 639.0 11 639.0 12 996.0 13 1353.0 14 2302.5 15 3252.0 16 3252.0 17 4916.5 18 6581.0 19 6581.0 20 9195.0 21 11809.0 22 16518.0 23 21227.0 24 21227.0 25 29535.5 26 37844.0 27 37844.0 28 50046.0 29 62248.0 30 84302.5 31 106357.0 32 106357.0 33 131902.0 34 157447.0 35 157447.0 36 166576.5 37 175706.0 38 181862.0 39 188018.0 40 188018.0 41 177171.5 42 166325.0 43 158324.5 44 150324.0 45 150324.0 46 141348.5 47 132373.0 48 132373.0 49 128134.5 50 123896.0 51 116398.5 52 108901.0 53 108901.0 54 99751.5 55 90602.0 56 90602.0 57 81434.0 58 72266.0 59 60408.5 60 48551.0 61 48551.0 62 43908.0 63 39265.0 64 32849.0 65 26433.0 66 26433.0 67 22629.0 68 18825.0 69 18825.0 70 14934.5 71 11044.0 72 8050.5 73 5057.0 74 5057.0 75 3987.0 76 2917.0 77 2917.0 78 2434.0 79 1951.0 80 1557.0 81 1163.0 82 1163.0 83 1038.0 84 913.0 85 913.0 86 655.5 87 398.0 88 296.0 89 194.0 90 194.0 91 118.5 92 43.0 93 29.0 94 15.0 95 15.0 96 10.0 97 5.0 98 5.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008621539761921534 2 5.634993308445447E-5 3 0.0 4 1.1269986616890894E-4 5 5.634993308445447E-5 6 1.1269986616890894E-4 7 2.2539973233781787E-4 8 0.002817496654222723 9 0.004564344579840811 10 6.761991970134536E-4 11 0.004846094245263084 12 5.071493977600901E-4 13 1.690497992533634E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.690497992533634E-4 22 5.634993308445447E-5 23 1.690497992533634E-4 24 0.0 25 0.0 26 5.634993308445447E-5 27 1.1269986616890894E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.1269986616890894E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1774625.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.278387372441074 #Duplication Level Percentage of deduplicated Percentage of total 1 60.34993465656435 22.497482420289128 2 16.96388820334262 12.647727915739793 3 7.987305873713975 8.932616472674503 4 4.539959509986822 6.769694770739461 5 2.86424308107079 5.338718155249554 6 1.8237846183373085 4.079264969176667 7 1.2046194106151267 3.143438831769064 8 0.8575753564624379 2.55752210714128 9 0.623025978044409 2.0902863377370107 >10 2.547975351597129 15.550182330175552 >50 0.12838672116228222 3.3468369150144306 >100 0.09412099736233544 7.006149217530135 >500 0.01047436680087275 2.7219546229476808 >1k 0.004554072522118587 3.0282169601491953 >5k 1.5180241740395293E-4 0.2899079736665482 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 5123 0.28868070719166017 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 4706 0.2651827850954427 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAG 4564 0.2571810945974502 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 4251 0.23954356554201592 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCA 2779 0.15659646404169897 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 2527 0.14239628090441644 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 2419 0.13631048813129534 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAA 2391 0.13473269000493063 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 1948 0.1097696696485173 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 5.634993308445446E-5 0.0 21 0.0 0.0 0.0 1.1269986616890892E-4 0.0 22 0.0 0.0 0.0 3.380995985067268E-4 0.0 23 0.0 0.0 0.0 3.9444953159118123E-4 0.0 24 0.0 0.0 0.0 5.071493977600902E-4 0.0 25 0.0 0.0 0.0 6.761991970134536E-4 0.0 26 0.0 0.0 0.0 9.015989293512714E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 35 0.0020641782 22.862476 5 GTATCAA 2435 0.0 21.946785 1 GGTATCA 775 0.0 20.025965 1 TAGGACC 1805 0.0 19.592943 4 TCCTCGC 935 0.0 17.966537 29 GGACCTG 2845 0.0 17.776178 6 AGGACCT 2910 0.0 17.43362 5 GCACCGT 85 4.974607E-6 16.945608 6 CCTCGCC 995 0.0 16.722338 30 ATTTAGA 1575 0.0 16.457273 1 GTCCTAC 4240 0.0 16.302015 1 TTCCTCG 1075 0.0 16.073187 28 TCTCGTA 60 0.002442938 15.999677 2 GACCTGG 3105 0.0 15.926869 7 TGTAGGA 5355 0.0 15.745712 2 AAATGTC 1705 0.0 15.675653 7 GTAGGAC 5070 0.0 15.623186 3 AATGTCC 1715 0.0 15.58425 8 CTAGGAC 370 0.0 15.569446 3 ATGTCCA 1700 0.0 15.5325985 9 >>END_MODULE