##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062829_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2771597 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.236572633034314 32.0 32.0 32.0 32.0 32.0 2 31.280609338226302 32.0 32.0 32.0 32.0 32.0 3 31.366831469365856 32.0 32.0 32.0 32.0 32.0 4 31.46192682413785 32.0 32.0 32.0 32.0 32.0 5 31.387969823895755 32.0 32.0 32.0 32.0 32.0 6 34.906102149771414 36.0 36.0 36.0 36.0 36.0 7 34.93024563094851 36.0 36.0 36.0 36.0 36.0 8 34.86418732593519 36.0 36.0 36.0 32.0 36.0 9 34.976498387031015 36.0 36.0 36.0 36.0 36.0 10 34.82269788861801 36.0 36.0 36.0 32.0 36.0 11 34.998864192737976 36.0 36.0 36.0 36.0 36.0 12 34.89059231915751 36.0 36.0 36.0 32.0 36.0 13 34.95913222593328 36.0 36.0 36.0 36.0 36.0 14 34.895923180751026 36.0 36.0 36.0 32.0 36.0 15 34.86576259102604 36.0 36.0 36.0 32.0 36.0 16 34.88113423416175 36.0 36.0 36.0 32.0 36.0 17 34.83436011801138 36.0 36.0 36.0 32.0 36.0 18 34.84270151829433 36.0 36.0 36.0 32.0 36.0 19 34.84023146222196 36.0 36.0 36.0 32.0 36.0 20 34.830180578200945 36.0 36.0 36.0 32.0 36.0 21 34.82261382156208 36.0 36.0 36.0 32.0 36.0 22 34.804290089793 36.0 36.0 36.0 32.0 36.0 23 34.74479298397278 36.0 36.0 36.0 32.0 36.0 24 34.717536856909575 36.0 36.0 36.0 32.0 36.0 25 34.700772154104655 36.0 36.0 36.0 32.0 36.0 26 34.6355786934392 36.0 36.0 36.0 32.0 36.0 27 34.62547441060154 36.0 36.0 36.0 32.0 36.0 28 34.59103578189759 36.0 36.0 36.0 32.0 36.0 29 34.55468345506219 36.0 36.0 36.0 32.0 36.0 30 34.53489125583553 36.0 36.0 36.0 32.0 36.0 31 34.531632845612116 36.0 36.0 36.0 32.0 36.0 32 34.51443842665438 36.0 36.0 36.0 32.0 36.0 33 34.47911077981395 36.0 36.0 36.0 32.0 36.0 34 34.47997634576744 36.0 36.0 36.0 32.0 36.0 35 34.44622793284882 36.0 36.0 36.0 32.0 36.0 36 34.425556457161704 36.0 36.0 36.0 32.0 36.0 37 34.41907463458793 36.0 36.0 36.0 32.0 36.0 38 33.969151359306565 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 9.0 21 59.0 22 226.0 23 668.0 24 1797.0 25 4519.0 26 9595.0 27 18646.0 28 32246.0 29 51249.0 30 77858.0 31 112207.0 32 161576.0 33 259257.0 34 631839.0 35 1409845.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.78125904345259 18.472169800768004 12.061232428188221 26.68533872759118 2 16.01059461768598 20.39063413282455 36.28645733360851 27.31231391588096 3 17.756080700044055 24.156001034782474 28.661454028128908 29.426464237044563 4 12.00964500869357 15.971163112568277 35.892839811386175 36.12635206735198 5 14.43630833509225 36.61086847104285 33.02791352993493 15.924909663929975 6 34.8653879319987 35.77136478142181 16.181879452762562 13.181367833816928 7 30.597856892613358 30.320650689515706 20.709825395811706 18.371667022059235 8 28.390956511197203 32.64884048260516 19.08349903537418 19.87670397082345 9 27.392275571325637 13.85008008318982 18.390340513217964 40.36730383226658 10 15.93059248304122 26.16156962129448 30.945531652963858 26.962306242700446 11 38.269313965575776 20.900428976730474 21.783026319160275 19.047230738533468 12 24.910619735638633 23.649067230483638 27.97179231378435 23.468520720093373 13 29.21536459357489 18.832526998011613 25.33265165556415 26.619456752849352 14 23.750494750860245 19.66880466388151 24.510237238675032 32.07046334658322 15 25.371906521763442 27.037913520616453 21.73274108753906 25.85743887008104 16 26.385545950583726 25.49609485073046 23.069299035898798 25.04906016278701 17 24.475491927578215 25.80014338303873 24.507062173901907 25.217302515481148 18 25.691649976529778 24.232202589337483 25.609711657214234 24.466435776918505 19 25.892112020614828 24.795199302063033 24.900806286050965 24.41188239127117 20 26.04790667618705 23.856462537663305 24.359710304203677 25.735920481945968 21 27.54636052263085 23.905313658967966 23.924219753766156 24.624106064635033 22 26.156455037622738 23.915579296397922 24.597244546912517 25.33072111906682 23 24.397250532275507 23.57234527027978 25.382532992782846 26.64787120466187 24 25.09661397382087 24.73667708544929 24.81976997377324 25.346938966956596 25 25.177009924967418 24.155071662680996 24.86329176402333 25.804626648328256 26 25.05699782471983 25.13514771447653 25.235667378771154 24.57218708203249 27 26.00048924914688 24.225481798560683 24.221729445221776 25.552299507070657 28 24.76730924445365 24.30512083827483 25.514351473175935 25.413218444095588 29 24.804147211878206 24.45056045305288 25.414733815919128 25.330558519149786 30 24.673284030831322 24.701570971537347 25.69929899621049 24.925846001420844 31 25.493533150743055 24.54631752018782 24.196230548669234 25.76391878039989 32 25.23404376610308 24.4483595558806 24.088999952013225 26.228596726003094 33 24.622158271927702 23.99086158629844 25.021891710807886 26.365088430965972 34 25.672130544231358 24.17364429244223 25.14405954401019 25.010165619316226 35 26.372340567550047 23.88929559383994 25.12417930889664 24.614184529713377 36 24.85884491865159 24.82655306669765 24.623673643751236 25.690928370899517 37 26.204891981049194 24.52614864282217 24.45095733614952 24.818002039979117 38 24.985883589858123 24.111153244862077 25.14604395949339 25.75691920578641 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 49.0 1 90.5 2 132.0 3 132.0 4 463.0 5 794.0 6 794.0 7 1004.0 8 1214.0 9 1265.5 10 1317.0 11 1317.0 12 1795.0 13 2273.0 14 3353.5 15 4434.0 16 4434.0 17 6748.0 18 9062.0 19 9062.0 20 11259.0 21 13456.0 22 15472.5 23 17489.0 24 17489.0 25 20773.5 26 24058.0 27 24058.0 28 30735.5 29 37413.0 30 45764.5 31 54116.0 32 54116.0 33 72122.5 34 90129.0 35 90129.0 36 101404.0 37 112679.0 38 129720.5 39 146762.0 40 146762.0 41 157521.0 42 168280.0 43 193822.0 44 219364.0 45 219364.0 46 222215.0 47 225066.0 48 225066.0 49 243193.0 50 261320.0 51 265395.0 52 269470.0 53 269470.0 54 256763.5 55 244057.0 56 244057.0 57 238002.0 58 231947.0 59 206775.5 60 181604.0 61 181604.0 62 173345.5 63 165087.0 64 136544.0 65 108001.0 66 108001.0 67 90836.5 68 73672.0 69 73672.0 70 59016.5 71 44361.0 72 34409.5 73 24458.0 74 24458.0 75 17937.5 76 11417.0 77 11417.0 78 11745.5 79 12074.0 80 9403.5 81 6733.0 82 6733.0 83 6466.0 84 6199.0 85 6199.0 86 3923.0 87 1647.0 88 1368.0 89 1089.0 90 1089.0 91 644.5 92 200.0 93 146.0 94 92.0 95 92.0 96 64.0 97 36.0 98 36.0 99 41.0 100 46.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009200471785761062 2 3.6080281512788477E-5 3 0.0 4 2.886422521023078E-4 5 7.216056302557695E-5 6 1.0824084453836544E-4 7 5.051239411790387E-4 8 0.0020204957647161547 9 0.0037523492773300017 10 8.659267563069235E-4 11 0.00425747321850904 12 4.3296337815346175E-4 13 1.443211260511539E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.443211260511539E-4 22 7.216056302557695E-5 23 2.1648168907673087E-4 24 0.0 25 3.6080281512788477E-5 26 0.0 27 1.0824084453836544E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2771597.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.456853193439045 #Duplication Level Percentage of deduplicated Percentage of total 1 76.59701343605938 35.584562082548885 2 13.555882483125083 12.59527284852108 3 4.251660183297847 5.925562588915748 4 1.8212342359722917 3.384352461257196 5 0.9722902744822984 2.258477327151635 6 0.6006041240113684 1.6741306569942123 7 0.3999257337797654 1.3005503771739464 8 0.30021954237273046 1.1157804164649114 9 0.2002396345181676 0.837225297388656 >10 1.1205591414228906 9.211808168139637 >50 0.07499947016165194 2.445907882923751 >100 0.07681204634980547 7.856625317766879 >500 0.016979325191716892 5.560100961465482 >1k 0.01150212351696702 10.066364353309963 >5k 7.824573821066E-5 0.18327925997793204 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5042 0.1819167793874795 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 4637 0.16730426537480014 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 4413 0.15922228231593555 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 4285 0.15460400628229862 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 4282 0.15449576543776025 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 4184 0.15095989784950697 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3866 0.13948636832844025 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3786 0.13659994580741716 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3702 0.13356920216034293 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 3663 0.13216207118134418 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 3604 0.13003333457208965 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3552 0.12815715993342466 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3490 0.12592018247963177 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 3360 0.12122974588296928 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 3349 0.1208328627863286 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 3320 0.11978653462245774 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 3187 0.11498785718125687 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 3149 0.11361680648377091 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 2995 0.10806044313080149 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 2959 0.10676155299634109 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 2884 0.10405553188288195 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 2865 0.10337000653413898 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 2850 0.10282880231144716 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 2824 0.10189071499211466 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 2799 0.10098870795429493 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.6080281512788477E-5 2 0.0 0.0 0.0 0.0 3.6080281512788477E-5 3 0.0 0.0 0.0 0.0 3.6080281512788477E-5 4 0.0 0.0 0.0 3.6080281512788477E-5 3.6080281512788477E-5 5 0.0 0.0 0.0 3.6080281512788477E-5 3.6080281512788477E-5 6 0.0 0.0 0.0 3.6080281512788477E-5 3.6080281512788477E-5 7 0.0 0.0 0.0 3.6080281512788477E-5 3.6080281512788477E-5 8 0.0 0.0 0.0 3.6080281512788477E-5 3.6080281512788477E-5 9 0.0 0.0 0.0 1.0824084453836542E-4 3.6080281512788477E-5 10 0.0 0.0 0.0 1.0824084453836542E-4 3.6080281512788477E-5 11 0.0 0.0 0.0 1.0824084453836542E-4 3.6080281512788477E-5 12 0.0 0.0 0.0 1.0824084453836542E-4 1.443211260511539E-4 13 0.0 0.0 0.0 1.0824084453836542E-4 1.443211260511539E-4 14 0.0 0.0 0.0 1.0824084453836542E-4 1.443211260511539E-4 15 0.0 0.0 0.0 1.0824084453836542E-4 3.247225336150963E-4 16 0.0 0.0 0.0 1.0824084453836542E-4 3.247225336150963E-4 17 0.0 0.0 0.0 1.0824084453836542E-4 3.247225336150963E-4 18 0.0 0.0 0.0 2.1648168907673085E-4 3.247225336150963E-4 19 0.0 0.0 0.0 2.5256197058951934E-4 3.247225336150963E-4 20 0.0 0.0 0.0 2.5256197058951934E-4 3.6080281512788475E-4 21 0.0 0.0 0.0 3.247225336150963E-4 3.968830966406732E-4 22 0.0 0.0 0.0 3.968830966406732E-4 3.968830966406732E-4 23 0.0 0.0 0.0 5.051239411790387E-4 3.968830966406732E-4 24 0.0 0.0 0.0 6.85525348742981E-4 3.968830966406732E-4 25 0.0 0.0 0.0 8.29846474794135E-4 3.968830966406732E-4 26 0.0 0.0 0.0 0.0010102478823580774 3.968830966406732E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATA 70 1.7874572E-5 18.287241 9 TCTAGCG 905 0.0 18.209166 28 TAGCGGC 940 0.0 17.701368 30 CTAGCGG 945 0.0 17.60771 29 GTATCAA 4325 0.0 16.98207 1 ATCGTTT 685 0.0 15.882532 29 AGCGGCG 1050 0.0 15.542191 31 GTATTAG 695 0.0 15.426027 1 CATCGTT 740 0.0 15.134487 28 TCGTTTA 735 0.0 15.019764 30 TTTTCGG 980 0.0 14.856506 29 AAGACGG 1200 0.0 14.801502 5 CGGTCCA 1170 0.0 14.769664 10 GTTTTCG 995 0.0 14.632539 28 TAAGGCG 110 3.5428457E-6 14.54693 5 CAAGACG 1200 0.0 14.534284 4 TACACCG 155 3.1341187E-9 14.453079 5 GTATTAC 200 3.6379788E-12 14.401462 1 ATACCGT 865 0.0 14.244477 6 CGCAAGA 1135 0.0 14.238303 2 >>END_MODULE