##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062828_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1784595 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.249041379136443 32.0 32.0 32.0 32.0 32.0 2 30.913237457238196 32.0 32.0 32.0 32.0 32.0 3 30.970978289191667 32.0 32.0 32.0 32.0 32.0 4 31.018440038215953 32.0 32.0 32.0 32.0 32.0 5 30.963916743014522 32.0 32.0 32.0 32.0 32.0 6 34.600658973044304 36.0 36.0 36.0 32.0 36.0 7 34.53027661738378 36.0 36.0 36.0 32.0 36.0 8 34.520166200174266 36.0 36.0 36.0 32.0 36.0 9 34.6294509398491 36.0 36.0 36.0 32.0 36.0 10 34.38937854247042 36.0 36.0 36.0 32.0 36.0 11 34.62797721611906 36.0 36.0 36.0 32.0 36.0 12 34.46507302777381 36.0 36.0 36.0 32.0 36.0 13 34.53892395753658 36.0 36.0 36.0 32.0 36.0 14 34.44151474143993 36.0 36.0 36.0 32.0 36.0 15 34.39300121316041 36.0 36.0 36.0 32.0 36.0 16 34.41012106388284 36.0 36.0 36.0 32.0 36.0 17 34.34445294310474 36.0 36.0 36.0 32.0 36.0 18 34.36225866373043 36.0 36.0 36.0 32.0 36.0 19 34.35444120374651 36.0 36.0 36.0 32.0 36.0 20 34.31831479971646 36.0 36.0 36.0 32.0 36.0 21 34.29986187342226 36.0 36.0 36.0 32.0 36.0 22 34.2803706163023 36.0 36.0 36.0 32.0 36.0 23 34.23254127687235 36.0 36.0 36.0 32.0 36.0 24 34.216748898209396 36.0 36.0 36.0 32.0 36.0 25 34.19126860716297 36.0 36.0 36.0 32.0 36.0 26 34.14222498662161 36.0 36.0 36.0 32.0 36.0 27 34.144829499130054 36.0 36.0 36.0 32.0 36.0 28 34.13019088364587 36.0 36.0 36.0 32.0 36.0 29 34.092457952644715 36.0 36.0 36.0 32.0 36.0 30 34.06820314973425 36.0 36.0 36.0 32.0 36.0 31 34.08361785166942 36.0 36.0 36.0 32.0 36.0 32 34.0407616293893 36.0 36.0 36.0 32.0 36.0 33 33.99761794692913 36.0 36.0 36.0 32.0 36.0 34 33.98774343758668 36.0 36.0 36.0 32.0 36.0 35 33.94981102154831 36.0 36.0 36.0 32.0 36.0 36 33.90839097946593 36.0 36.0 36.0 32.0 36.0 37 33.902646258674935 36.0 36.0 36.0 32.0 36.0 38 33.29805642176516 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 2.0 9 5.0 10 15.0 11 7.0 12 12.0 13 4.0 14 295.0 15 553.0 16 739.0 17 844.0 18 1005.0 19 1275.0 20 1755.0 21 2397.0 22 3529.0 23 5182.0 24 7421.0 25 10922.0 26 16128.0 27 22940.0 28 32479.0 29 44253.0 30 60163.0 31 81248.0 32 111082.0 33 167655.0 34 382472.0 35 830211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.93413671201965 16.933452798463186 11.35548973877195 25.77692075074521 2 16.767399380353645 19.902578944358538 37.26220818816796 26.067813487119857 3 18.86351408908516 24.504416149207557 28.19212490752987 28.43994485417741 4 12.637837413772814 15.462446694647891 35.79844552907488 36.10127036250441 5 14.811404966179925 36.40638106994824 33.202341600960665 15.579872362911166 6 33.93917013713 35.38987237361761 17.009286197791752 13.661671291460642 7 30.140973240972457 30.409885946047112 21.185434894435375 18.26370591854506 8 28.45249782583358 32.20024521010965 19.671331038130845 19.675925925925927 9 27.97797593064637 14.037598488843114 18.446166717004942 39.53825886350557 10 16.162078593918718 26.182862067554975 31.023579072179565 26.631480266346742 11 37.660984790113886 21.012259023637718 22.276994423844943 19.049761762403456 12 25.620447404652914 23.43643443562247 28.30452789736848 22.638590262356136 13 29.839330218461363 19.178599630228042 25.119609850796625 25.862460300513973 14 24.259514760389543 19.75204518173229 24.695618452420316 31.292821605457853 15 25.370856432166917 26.793077608157468 22.55129944775782 25.284766511917795 16 25.997071286106653 25.24225216192997 23.76954507422939 24.991131477733987 17 24.255562891414467 25.401825096932352 25.170297169541662 25.172314842111515 18 25.391844259768785 24.03388044897479 26.379958644109585 24.194316647146834 19 25.92424891116496 24.624539640768496 25.322335520343227 24.12887592772332 20 26.03755483377828 23.666056966607716 25.098796066538004 25.197592133076004 21 27.528669159247205 23.69868018757117 24.123281867821504 24.649368785360124 22 26.162892676795273 24.057987582735528 24.70670250962341 25.07241723084579 23 24.271806574251745 23.790864910424474 25.602998403959614 26.334330111364167 24 25.047958559769285 24.931613867883765 25.041401561238164 24.979026011108786 25 25.1104489188812 24.104233067254608 25.205667852373104 25.579650161491085 26 24.74377490863215 25.085034728468937 25.64285357997748 24.52833678292143 27 25.48654028499761 24.576729005691433 24.688921317435874 25.24780939187508 28 24.506503185748468 24.343545286941513 25.66822264935473 25.481728877955295 29 24.52645571436257 24.736104137151873 25.615775693560245 25.12166445492531 30 24.525370009660712 24.87425387268933 25.88644295362187 24.71393316402809 31 25.30582967682643 24.708852389198036 24.36046153242663 25.6248564015489 32 24.66187534148699 24.843049076058783 24.47610641785399 26.018969164600232 33 24.348763654051776 24.354759892672934 25.303566585147706 25.992909868127583 34 25.318671144828713 24.534581808746314 25.38984500351106 24.756902042913914 35 26.06149291908381 24.266898615313654 25.404653805995952 24.26695465960658 36 24.619370559650115 25.28667350016561 24.816753691966863 25.277202248217417 37 25.690138666594937 25.0366504821724 24.64117272576473 24.63203812546794 38 24.746875308210274 24.959428320377295 25.10081277851001 25.192883592902422 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 782.0 1 622.5 2 463.0 3 463.0 4 1042.5 5 1622.0 6 1622.0 7 1894.5 8 2167.0 9 2033.5 10 1900.0 11 1900.0 12 2377.5 13 2855.0 14 3603.0 15 4351.0 16 4351.0 17 6436.0 18 8521.0 19 8521.0 20 10113.5 21 11706.0 22 11697.5 23 11689.0 24 11689.0 25 13357.0 26 15025.0 27 15025.0 28 19851.0 29 24677.0 30 31055.0 31 37433.0 32 37433.0 33 48703.0 34 59973.0 35 59973.0 36 66552.5 37 73132.0 38 83904.5 39 94677.0 40 94677.0 41 101153.0 42 107629.0 43 122684.0 44 137739.0 45 137739.0 46 143524.5 47 149310.0 48 149310.0 49 157231.5 50 165153.0 51 165985.0 52 166817.0 53 166817.0 54 159311.0 55 151805.0 56 151805.0 57 148271.5 58 144738.0 59 130501.5 60 116265.0 61 116265.0 62 111303.5 63 106342.0 64 87225.5 65 68109.0 66 68109.0 67 57079.5 68 46050.0 69 46050.0 70 37372.5 71 28695.0 72 22356.0 73 16017.0 74 16017.0 75 11933.5 76 7850.0 77 7850.0 78 7711.0 79 7572.0 80 5985.5 81 4399.0 82 4399.0 83 4509.0 84 4619.0 85 4619.0 86 3038.0 87 1457.0 88 1262.5 89 1068.0 90 1068.0 91 805.5 92 543.0 93 443.5 94 344.0 95 344.0 96 313.5 97 283.0 98 283.0 99 550.5 100 818.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12361348092984684 2 0.05586701744653549 3 0.013168253861520401 4 0.0036422829829737277 5 2.2414049125992172E-4 6 6.163863509647847E-4 7 5.603512281498043E-5 8 1.6810536844494127E-4 9 1.1207024562996086E-4 10 2.2414049125992172E-4 11 0.0017931239300793737 12 0.0020172644213392954 13 0.014120850949375069 14 0.008797514281951926 15 0.023198540845401898 16 0.010870813826106204 17 0.020228679336207936 18 0.004762985439273336 19 0.006668179614982671 20 0.006219898632462827 21 0.005547477158683063 22 0.008069057685357182 23 0.010030286983881496 24 0.013560499721225264 25 0.016026045125084404 26 0.018155379792053658 27 0.00890958452758189 28 0.004762985439273336 29 0.010030286983881496 30 0.00263365077230408 31 0.005883687895572945 32 0.006724214737797651 33 0.008013022562542202 34 0.01300014849307546 35 0.016362255861974283 36 0.013896710458115148 37 0.009582006001361654 38 0.005547477158683063 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1784595.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.857600156581356 #Duplication Level Percentage of deduplicated Percentage of total 1 74.91425150733244 35.85216294667489 2 14.435560636045924 13.817025779119424 3 4.805953033138506 6.90004135893756 4 2.037262964683103 3.899940655104619 5 1.0662441360952926 2.551394276727401 6 0.636253924457927 1.826975154885791 7 0.3937114672690174 1.3189460184335122 8 0.28960153491117757 1.1087707570009098 9 0.20302425874670463 0.8744628417467495 >10 1.022207529340218 8.701768019530455 >50 0.08431924576769717 2.861262594502901 >100 0.08898181783797265 9.375034656379272 >500 0.015438857880230002 5.128073222129142 >1k 0.007071232616899238 5.456784294924661 >5k 1.1785387694832061E-4 0.32735742390274464 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5804 0.3252278528181464 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3801 0.2129895018197406 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2520 0.1412085094937507 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2479 0.13891106945833648 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2463 0.1380145074932968 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2410 0.13504464598410282 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2359 0.13218685472053884 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2280 0.1277600800181554 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2245 0.12579885071963107 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2215 0.12411779703518165 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2196 0.12305312970169703 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2178 0.12204449749102739 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2075 0.11627287984108439 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2062 0.11554442324448964 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2045 0.11459182615663499 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1946 0.10904434899795191 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1926 0.10792364654165232 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1887 0.10573827675186807 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1860 0.1042253284358636 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1828 0.10243220450578422 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 1.1207024562996086E-4 0.0 16 0.0 0.0 0.0 2.2414049125992172E-4 5.603512281498043E-5 17 0.0 5.603512281498043E-5 0.0 3.362107368898826E-4 5.603512281498043E-5 18 0.0 5.603512281498043E-5 0.0 4.4828098251984344E-4 5.603512281498043E-5 19 0.0 5.603512281498043E-5 0.0 5.603512281498043E-4 1.1207024562996086E-4 20 0.0 5.603512281498043E-5 0.0 6.724214737797652E-4 1.1207024562996086E-4 21 0.0 1.1207024562996086E-4 0.0 8.965619650396869E-4 1.1207024562996086E-4 22 0.0 1.1207024562996086E-4 0.0 0.0012888078247445499 1.1207024562996086E-4 23 0.0 1.1207024562996086E-4 0.0 0.0025776156494890998 1.1207024562996086E-4 24 0.0 1.1207024562996086E-4 0.0 0.004146599088308551 1.1207024562996086E-4 25 0.0 1.1207024562996086E-4 0.0 0.005099196176163219 1.1207024562996086E-4 26 0.0 1.1207024562996086E-4 0.0 0.006275933755277808 1.1207024562996086E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 305 0.0 17.31049 7 CATCGTT 485 0.0 17.154144 28 GTGTATA 240 0.0 16.683018 1 ATCGTTT 480 0.0 16.66712 29 CGCTTCG 610 0.0 16.525038 32 ACCGTCG 440 0.0 16.362705 8 TACCGTC 455 0.0 16.174904 7 AAACGCT 620 0.0 16.000435 29 GTCGATA 70 3.6978515E-4 15.999986 9 CTAGCGG 555 0.0 15.856286 29 TCTAGCG 555 0.0 15.855398 28 CGTTTAT 520 0.0 15.692734 31 TAATACC 155 1.891749E-10 15.480387 4 AACGCTT 635 0.0 15.370496 30 CGTCGTA 470 0.0 15.319566 10 AGAACCG 400 0.0 15.196154 5 ATACCGT 495 0.0 15.188501 6 GTACTAA 95 1.4200354E-5 15.172765 1 GTAAACG 655 0.0 15.143752 27 TCGTTTA 540 0.0 15.111522 30 >>END_MODULE