##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062824_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1447426 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.151354887918277 32.0 32.0 32.0 32.0 32.0 2 31.286657141712254 32.0 32.0 32.0 32.0 32.0 3 31.374275437915305 32.0 32.0 32.0 32.0 32.0 4 31.48148713647537 32.0 32.0 32.0 32.0 32.0 5 31.397511858982774 32.0 32.0 32.0 32.0 32.0 6 34.92108059410291 36.0 36.0 36.0 36.0 36.0 7 34.949645785000406 36.0 36.0 36.0 36.0 36.0 8 34.88900848817141 36.0 36.0 36.0 36.0 36.0 9 34.990872072216476 36.0 36.0 36.0 36.0 36.0 10 34.848801251324765 36.0 36.0 36.0 32.0 36.0 11 35.02203083266433 36.0 36.0 36.0 36.0 36.0 12 34.92253213635792 36.0 36.0 36.0 32.0 36.0 13 34.97344596545868 36.0 36.0 36.0 36.0 36.0 14 34.910350511874185 36.0 36.0 36.0 32.0 36.0 15 34.88698627770953 36.0 36.0 36.0 32.0 36.0 16 34.89504955693763 36.0 36.0 36.0 32.0 36.0 17 34.86826062265014 36.0 36.0 36.0 32.0 36.0 18 34.85779238455023 36.0 36.0 36.0 32.0 36.0 19 34.85089945876335 36.0 36.0 36.0 32.0 36.0 20 34.838189309850726 36.0 36.0 36.0 32.0 36.0 21 34.82868070630209 36.0 36.0 36.0 32.0 36.0 22 34.81129328891425 36.0 36.0 36.0 32.0 36.0 23 34.74898820388745 36.0 36.0 36.0 32.0 36.0 24 34.730263239709664 36.0 36.0 36.0 32.0 36.0 25 34.710207637557986 36.0 36.0 36.0 32.0 36.0 26 34.645738711339995 36.0 36.0 36.0 32.0 36.0 27 34.62917620659018 36.0 36.0 36.0 32.0 36.0 28 34.59558208847982 36.0 36.0 36.0 32.0 36.0 29 34.55947592484866 36.0 36.0 36.0 32.0 36.0 30 34.53306421191826 36.0 36.0 36.0 32.0 36.0 31 34.52249510510382 36.0 36.0 36.0 32.0 36.0 32 34.490097593935715 36.0 36.0 36.0 32.0 36.0 33 34.45510858586208 36.0 36.0 36.0 32.0 36.0 34 34.43397244487801 36.0 36.0 36.0 32.0 36.0 35 34.39164903767101 36.0 36.0 36.0 32.0 36.0 36 34.354056787704515 36.0 36.0 36.0 32.0 36.0 37 34.33868121755447 36.0 36.0 36.0 32.0 36.0 38 33.91801169800736 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 6.0 21 20.0 22 124.0 23 377.0 24 956.0 25 2455.0 26 5249.0 27 9767.0 28 17333.0 29 27351.0 30 41163.0 31 59141.0 32 83812.0 33 133367.0 34 322541.0 35 743761.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.1537956084851 18.339850106163862 12.033101843374967 26.47325244197608 2 15.355890633366151 20.835898233069074 37.44228543793288 26.365925695631898 3 18.062339629107118 24.855156671221877 28.84465250727844 28.237851192392565 4 11.811031782111318 16.261922955220953 36.39314973283461 35.533895529833124 5 13.676770817140785 37.41948632917077 33.57127312295974 15.332469730728707 6 33.83917486456966 36.26721421450399 16.748939321815392 13.144671599110971 7 29.58128313650062 30.886154832522926 21.093640969945184 18.43892106103127 8 27.82854714849782 33.56236549110644 19.501794603408193 19.107292756987555 9 27.437885656131012 13.8727389176652 18.573606905209513 40.11576852099427 10 15.403620113955036 27.232655779656533 32.04227127986276 25.32145282652567 11 37.49308217034339 21.039944118445682 22.433113828266478 19.033859882944448 12 24.58300027013527 23.985110088757743 29.218825457381843 22.213064183725145 13 29.84308675274142 19.595847519455255 25.332798129642732 25.228267598160592 14 23.22101440764502 20.076259511712514 25.70045031663104 31.002275764011422 15 24.828834082018698 27.914864041408684 22.73746637133781 24.518835505234808 16 25.10028146516644 25.930997508680925 24.690657760742173 24.27806326541046 17 23.512082828414027 26.214880760743554 25.89666069284371 24.376375717998712 18 24.497003646473118 24.748622727517677 27.412454937247222 23.341918688761982 19 25.20260103107171 25.137105454786635 26.120091804347854 23.5402017097938 20 25.37124523118971 24.30542217702321 26.158297557180816 24.165035034606262 21 26.33851587371772 24.403491996816413 25.048430867527415 24.20956126193845 22 25.19189236617278 24.98925679102075 25.707082780052314 24.11176806275416 23 23.65652611572429 24.51246111192098 26.382681496701377 25.448331275653352 24 24.240962923147713 25.39349161891523 26.159472055911664 24.20607340202539 25 24.47303005473164 24.76278580044852 26.114841104139348 24.649343040680492 26 23.85697092632024 25.693057883442744 26.559837946810404 23.890133243426607 27 24.77551513895366 25.177746688084014 25.778468659861474 24.26826951310085 28 23.78131939042134 25.07278437723241 26.560183387613602 24.585712844732647 29 23.854414664376623 25.17144227062385 26.386288487287086 24.587854577712438 30 23.837004447895783 25.30726959443868 26.77131680652413 24.084409151141408 31 24.541220069281607 25.152235761966413 25.501752766635395 24.804791402116585 32 23.9366986636968 25.512461431534323 25.68027657372467 24.870563331044213 33 23.684457789206494 24.91692148683249 26.3776524672073 25.02096825675371 34 24.42404654883911 25.346718934163125 26.47741577116896 23.7518187458288 35 25.163497132150454 25.11223371695686 26.252188367488216 23.47208078340447 36 23.87686831658406 25.845120925007564 25.95075672262347 24.327254035784904 37 24.811907482662328 25.62721686635448 25.520544746328998 24.04033090465419 38 23.978859008238768 25.53893984144256 26.015233949945593 24.466967200373077 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 61.0 1 118.0 2 175.0 3 175.0 4 659.0 5 1143.0 6 1143.0 7 1474.0 8 1805.0 9 1875.5 10 1946.0 11 1946.0 12 2531.5 13 3117.0 14 3934.5 15 4752.0 16 4752.0 17 6868.5 18 8985.0 19 8985.0 20 10431.5 21 11878.0 22 12263.5 23 12649.0 24 12649.0 25 14666.5 26 16684.0 27 16684.0 28 21682.5 29 26681.0 30 32946.0 31 39211.0 32 39211.0 33 48738.0 34 58265.0 35 58265.0 36 63141.0 37 68017.0 38 77057.5 39 86098.0 40 86098.0 41 89684.5 42 93271.0 43 103239.0 44 113207.0 45 113207.0 46 119009.0 47 124811.0 48 124811.0 49 128789.5 50 132768.0 51 130967.0 52 129166.0 53 129166.0 54 122575.0 55 115984.0 56 115984.0 57 112067.0 58 108150.0 59 96362.5 60 84575.0 61 84575.0 62 79645.5 63 74716.0 64 61594.0 65 48472.0 66 48472.0 67 40359.5 68 32247.0 69 32247.0 70 25893.0 71 19539.0 72 15431.5 73 11324.0 74 11324.0 75 8467.5 76 5611.0 77 5611.0 78 5467.0 79 5323.0 80 4114.5 81 2906.0 82 2906.0 83 2740.5 84 2575.0 85 2575.0 86 1651.5 87 728.0 88 582.5 89 437.0 90 437.0 91 259.5 92 82.0 93 59.5 94 37.0 95 37.0 96 26.0 97 15.0 98 15.0 99 15.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009326901686165649 2 6.908816063826407E-5 3 0.0 4 5.527052851061126E-4 5 6.908816063826407E-5 6 2.072644819147922E-4 7 2.763526425530563E-4 8 0.002141732979786186 9 0.0037998488351045235 10 8.981460882974328E-4 11 0.005457964690422861 12 2.072644819147922E-4 13 1.3817632127652814E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.3817632127652814E-4 22 0.0 23 2.072644819147922E-4 24 0.0 25 0.0 26 0.0 27 6.908816063826407E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 6.908816063826407E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1447426.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.01658836147028 #Duplication Level Percentage of deduplicated Percentage of total 1 76.79976467209214 41.4846127455019 2 14.381689325359595 15.536995844610013 3 4.367015975501916 7.076739129499547 4 1.7033057248374777 3.680270567691272 5 0.8440975518642733 2.2797634997988636 6 0.46998455468402567 1.5232177335969563 7 0.2831394547678995 1.0705959163962133 8 0.19465799826863264 0.8411808770995621 9 0.1324297417326183 0.6438062561387999 >10 0.6611105259007992 6.519508346507924 >50 0.06911331083974363 2.687368344846947 >100 0.0783763244186951 8.940289571509826 >500 0.011196563501773511 4.037771010833251 >1k 0.003989580098333091 3.2656428043472756 >5k 1.2869613220429325E-4 0.41223735162166525 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5930 0.40969279258490593 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4409 0.3046097002541063 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2559 0.17679660307331774 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2052 0.14176890562971783 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2014 0.1391435555254638 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1988 0.13734726334886896 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1838 0.12698403925312934 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1720 0.1188316362978142 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1623 0.11213008471590256 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1609 0.11116285046696689 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1542 0.10653394370420319 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1519 0.10494491600952312 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1475 0.1019050369414395 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.908816063826406E-5 2 0.0 0.0 0.0 0.0 6.908816063826406E-5 3 0.0 0.0 0.0 0.0 6.908816063826406E-5 4 0.0 0.0 0.0 0.0 6.908816063826406E-5 5 0.0 0.0 0.0 0.0 6.908816063826406E-5 6 0.0 0.0 0.0 0.0 1.381763212765281E-4 7 0.0 0.0 0.0 0.0 1.381763212765281E-4 8 0.0 0.0 0.0 0.0 1.381763212765281E-4 9 0.0 0.0 0.0 0.0 1.381763212765281E-4 10 0.0 0.0 0.0 0.0 1.381763212765281E-4 11 0.0 0.0 0.0 0.0 1.381763212765281E-4 12 0.0 0.0 0.0 0.0 2.763526425530562E-4 13 0.0 0.0 0.0 0.0 2.763526425530562E-4 14 0.0 0.0 0.0 1.381763212765281E-4 2.763526425530562E-4 15 0.0 0.0 0.0 1.381763212765281E-4 4.145289638295844E-4 16 0.0 0.0 0.0 2.072644819147922E-4 4.145289638295844E-4 17 0.0 0.0 0.0 2.072644819147922E-4 4.145289638295844E-4 18 0.0 0.0 0.0 2.072644819147922E-4 4.145289638295844E-4 19 0.0 0.0 0.0 2.763526425530562E-4 4.145289638295844E-4 20 0.0 0.0 0.0 3.4544080319132034E-4 4.8361712446784845E-4 21 0.0 0.0 0.0 5.527052851061125E-4 4.8361712446784845E-4 22 0.0 0.0 0.0 5.527052851061125E-4 5.527052851061125E-4 23 0.0 0.0 0.0 0.0014508513734035452 6.217934457443766E-4 24 0.0 0.0 0.0 0.0026253501042540345 6.908816063826407E-4 25 0.0 0.0 0.0 0.003247143549998411 7.599697670209047E-4 26 0.0 0.0 0.0 0.004007113317019316 8.290579276591688E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGGCGT 100 1.4551915E-10 20.80146 6 GTATAAT 85 1.05628715E-8 20.707336 1 TACCGTC 335 0.0 17.67349 7 ATACCGT 355 0.0 17.5787 6 TAGACGT 65 2.1003057E-4 17.231384 4 CGCAAGA 400 0.0 17.199425 2 ATCGTTT 335 0.0 17.193455 29 AAGACGG 410 0.0 17.171936 5 TAGGACG 585 0.0 16.957869 4 ACGAACG 115 1.8426363E-8 16.695093 15 CATCGTT 355 0.0 16.675499 28 TCTAGCG 375 0.0 16.639442 28 CAAGACG 485 0.0 16.495434 4 ACCGTCG 340 0.0 16.472313 8 TTAGGAC 355 0.0 16.22537 3 TCGTTTA 355 0.0 16.22481 30 CTAGCGG 395 0.0 16.201988 29 CCGTCGT 340 0.0 16.001675 9 CGAGCGC 70 3.6952493E-4 16.001123 10 CGGTCCA 410 0.0 16.001123 10 >>END_MODULE