##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062823_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1306837 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2604793099675 32.0 32.0 32.0 32.0 32.0 2 30.93398641146524 32.0 32.0 32.0 32.0 32.0 3 30.99260274999866 32.0 32.0 32.0 32.0 32.0 4 31.046374566988845 32.0 32.0 32.0 32.0 32.0 5 30.985802360967742 32.0 32.0 32.0 32.0 32.0 6 34.636709092258634 36.0 36.0 36.0 32.0 36.0 7 34.565439301152324 36.0 36.0 36.0 32.0 36.0 8 34.550729739056976 36.0 36.0 36.0 32.0 36.0 9 34.66210323093087 36.0 36.0 36.0 32.0 36.0 10 34.428015888745115 36.0 36.0 36.0 32.0 36.0 11 34.67125739476308 36.0 36.0 36.0 32.0 36.0 12 34.51075688857907 36.0 36.0 36.0 32.0 36.0 13 34.57812718801197 36.0 36.0 36.0 32.0 36.0 14 34.49603584838813 36.0 36.0 36.0 32.0 36.0 15 34.45054432955296 36.0 36.0 36.0 32.0 36.0 16 34.460078800952225 36.0 36.0 36.0 32.0 36.0 17 34.40328135796584 36.0 36.0 36.0 32.0 36.0 18 34.42020772292183 36.0 36.0 36.0 32.0 36.0 19 34.408982145439715 36.0 36.0 36.0 32.0 36.0 20 34.37355844684532 36.0 36.0 36.0 32.0 36.0 21 34.35636119883352 36.0 36.0 36.0 32.0 36.0 22 34.33546800404335 36.0 36.0 36.0 32.0 36.0 23 34.294653426555875 36.0 36.0 36.0 32.0 36.0 24 34.28446623412101 36.0 36.0 36.0 32.0 36.0 25 34.261509277744665 36.0 36.0 36.0 32.0 36.0 26 34.22432177846204 36.0 36.0 36.0 32.0 36.0 27 34.226462060685456 36.0 36.0 36.0 32.0 36.0 28 34.20862433494001 36.0 36.0 36.0 32.0 36.0 29 34.18085040444983 36.0 36.0 36.0 32.0 36.0 30 34.1503508088614 36.0 36.0 36.0 32.0 36.0 31 34.16109201070983 36.0 36.0 36.0 32.0 36.0 32 34.12367265389639 36.0 36.0 36.0 32.0 36.0 33 34.07974598209264 36.0 36.0 36.0 32.0 36.0 34 34.07605615696525 36.0 36.0 36.0 32.0 36.0 35 34.02816495094645 36.0 36.0 36.0 32.0 36.0 36 33.99250097755114 36.0 36.0 36.0 32.0 36.0 37 33.9883313680283 36.0 36.0 36.0 32.0 36.0 38 33.39601495825416 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 3.0 10 12.0 11 23.0 12 11.0 13 6.0 14 240.0 15 454.0 16 615.0 17 620.0 18 745.0 19 920.0 20 1197.0 21 1567.0 22 2359.0 23 3523.0 24 5236.0 25 7522.0 26 10867.0 27 16144.0 28 22674.0 29 30755.0 30 42032.0 31 57628.0 32 79293.0 33 120993.0 34 276931.0 35 624463.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.44825588878877 17.32519047006111 11.483367964253535 25.74318567689658 2 16.27856763856678 20.00571180498397 38.0805885149843 25.63513204146495 3 18.63596463368249 24.56976414036629 28.950987512503186 27.84328371344803 4 12.294479823324963 15.412234103608341 36.62747186652035 35.665814206546344 5 14.05419510052539 37.02964569333213 34.06997369214453 14.846185513997954 6 33.374399502920795 36.188069793103026 17.09367830956342 13.343852394412755 7 29.33900708351539 30.957724643547742 21.48699493509902 18.216273337837848 8 27.74828325556268 33.34379117776244 19.873220317194075 19.034705249480808 9 27.631546728128086 14.054785757355933 18.829600653792824 39.484066860723146 10 15.52283530603687 27.069196134786615 32.25913580587005 25.14883275330646 11 36.91857506556036 21.469592772022885 22.54396389378418 19.06786826863257 12 24.143878726196537 24.24022130479532 29.490930099977426 22.12496986903072 13 29.516095827245852 19.703239522960747 25.436634183935475 25.344030465857927 14 23.39164772596827 19.842581751115397 25.805343190149305 30.960427332767026 15 24.794014026563676 27.237220067645296 23.18646236838137 24.782303537409657 16 25.119213888580642 26.15955643479492 24.32981169907055 24.391417977553886 17 23.380826933586007 26.117704326315934 25.9212345070498 24.58023423304826 18 24.352400994834515 25.134340922135067 26.88854027166635 23.62471781136407 19 25.102297415914087 25.41475700011249 26.060032340293972 23.422913243679446 20 25.2264206821662 24.4699632446629 25.995810978236833 24.307805094934068 21 26.4450217907855 24.549242583671642 24.97725263919127 24.028482986351584 22 25.332335427863452 24.70213975727327 25.524952610969155 24.440572203894124 23 23.96856822093467 24.57773495583924 26.032847556024592 25.4208492672015 24 24.287220869309667 25.49979106812404 25.8718887900778 24.341099272488492 25 24.475627769571638 24.83051560909529 26.058426003168506 24.635430618164563 26 24.039535245040298 25.66339170705835 26.432345181814217 23.864727866087136 27 24.68977645538176 25.32839883708739 25.506478439511476 24.47534626801937 28 24.042073686345184 25.126133054780738 26.233303105784938 24.59849015308914 29 23.944904770323024 25.52600745551905 26.170310626219212 24.358777147938714 30 24.078696653632186 25.49935337735979 26.327948637501052 24.094001331506977 31 24.292270359495205 25.42768351075838 25.523723377634113 24.756322752112304 32 24.083612974321497 25.555831901648002 25.380050277982914 24.98050484604759 33 23.847995212447636 25.08850390519177 25.934896634479255 25.12860424788134 34 24.604736201258323 25.324128177282674 26.06173454589147 24.009401075567535 35 25.094060057614655 25.16730291777513 26.064661888915765 23.67397513569445 36 23.99524273821131 25.935112663530873 25.585894749409547 24.483749848848262 37 24.824309732203876 25.75604402836758 25.507249925958693 23.912396313469856 38 24.05365715164673 25.651219331145192 25.89985314610929 24.39527037109879 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 410.0 1 358.0 2 306.0 3 306.0 4 813.0 5 1320.0 6 1320.0 7 1497.5 8 1675.0 9 1623.5 10 1572.0 11 1572.0 12 2003.5 13 2435.0 14 3153.0 15 3871.0 16 3871.0 17 5807.0 18 7743.0 19 7743.0 20 9208.5 21 10674.0 22 11531.0 23 12388.0 24 12388.0 25 14279.5 26 16171.0 27 16171.0 28 20504.0 29 24837.0 30 29543.0 31 34249.0 32 34249.0 33 41930.0 34 49611.0 35 49611.0 36 54709.0 37 59807.0 38 67156.5 39 74506.0 40 74506.0 41 79668.5 42 84831.0 43 94150.0 44 103469.0 45 103469.0 46 107688.5 47 111908.0 48 111908.0 49 116207.5 50 120507.0 51 119439.5 52 118372.0 53 118372.0 54 112585.5 55 106799.0 56 106799.0 57 102899.5 58 99000.0 59 88677.0 60 78354.0 61 78354.0 62 72786.0 63 67218.0 64 55512.5 65 43807.0 66 43807.0 67 35974.0 68 28141.0 69 28141.0 70 22369.5 71 16598.0 72 13080.5 73 9563.0 74 9563.0 75 7339.0 76 5115.0 77 5115.0 78 4751.0 79 4387.0 80 3378.5 81 2370.0 82 2370.0 83 2339.5 84 2309.0 85 2309.0 86 1571.5 87 834.0 88 691.0 89 548.0 90 548.0 91 395.0 92 242.0 93 218.0 94 194.0 95 194.0 96 173.0 97 152.0 98 152.0 99 348.0 100 544.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12587644824871044 2 0.058920890669609136 3 0.013008508329653968 4 0.002372139754231017 5 2.2956191169977587E-4 6 2.2956191169977587E-4 7 0.0 8 2.2956191169977587E-4 9 7.652063723325862E-5 10 7.652063723325862E-5 11 0.0019895365680647242 12 0.0032138667637968622 13 0.014845003623252173 14 0.009718120928623845 15 0.024180521365709723 16 0.011631136859455311 17 0.02104317523914612 18 0.0066572954392935 19 0.00826422882119193 20 0.006733816076526759 21 0.007039898625459793 22 0.0076520637233258625 23 0.010253765389256656 24 0.014615441711552397 25 0.01737018465194971 26 0.019589283131714208 27 0.009029435193524518 28 0.006274692253127208 29 0.011784178133921828 30 0.0035964699499631556 31 0.006733816076526759 32 0.007805104997792379 33 0.008799873281824742 34 0.013620673427520033 35 0.01721714337748319 36 0.0155336893583515 37 0.010253765389256656 38 0.007345981174392828 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1306837.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.8874293990463 #Duplication Level Percentage of deduplicated Percentage of total 1 78.98041980963082 44.140126360177796 2 12.670076691336412 14.161960331351315 3 3.814890663885696 6.39613297928978 4 1.569567762468695 3.5087643004795304 5 0.796541317459421 2.2258323321468354 6 0.45726411246732096 1.5333189481340976 7 0.31702097650415845 1.240224120967501 8 0.23575094759733062 1.0540411551683262 9 0.16075311964203473 0.8085670762203592 >10 0.8371076916394004 8.51260906911173 >50 0.07691850968919615 3.0090542728527097 >100 0.07351938219967999 8.384881463315335 >500 0.007558052045858772 2.811111066222846 >1k 0.002610963434023939 2.213376524561987 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4362 0.3337830196114741 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3059 0.23407662929653814 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1793 0.13720150255923272 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1394 0.10666976830316253 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1355 0.10368546345106544 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1349 0.10322633962766589 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 1.5304127446651725E-4 6 0.0 0.0 0.0 0.0 1.5304127446651725E-4 7 0.0 0.0 0.0 0.0 1.5304127446651725E-4 8 0.0 0.0 0.0 0.0 1.5304127446651725E-4 9 0.0 0.0 0.0 0.0 1.5304127446651725E-4 10 0.0 0.0 0.0 0.0 1.5304127446651725E-4 11 0.0 0.0 0.0 0.0 1.5304127446651725E-4 12 0.0 0.0 0.0 0.0 2.2956191169977587E-4 13 0.0 0.0 0.0 0.0 3.060825489330345E-4 14 0.0 0.0 0.0 0.0 3.060825489330345E-4 15 0.0 0.0 0.0 0.0 3.826031861662931E-4 16 0.0 0.0 0.0 0.0 3.826031861662931E-4 17 0.0 0.0 0.0 0.0 3.826031861662931E-4 18 0.0 0.0 0.0 0.0 3.826031861662931E-4 19 0.0 0.0 0.0 0.0 3.826031861662931E-4 20 0.0 0.0 0.0 1.5304127446651725E-4 4.5912382339955175E-4 21 0.0 0.0 0.0 4.5912382339955175E-4 5.356444606328104E-4 22 0.0 0.0 0.0 6.12165097866069E-4 5.356444606328104E-4 23 0.0 0.0 0.0 0.0010712889212656207 5.356444606328104E-4 24 0.0 0.0 0.0 0.0021425778425312415 5.356444606328104E-4 25 0.0 0.0 0.0 0.0029077842148638277 5.356444606328104E-4 26 0.0 0.0 0.0 0.004208635047829225 6.12165097866069E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGCCG 360 0.0 16.44468 15 GTCTTAC 90 8.503805E-6 16.015554 1 GTATAGG 110 1.997596E-7 16.015553 1 GTCCTAT 430 0.0 15.643097 1 TAGCGTA 215 0.0 15.626935 7 ACCGCAG 385 0.0 15.376256 29 ATAGCGT 220 0.0 15.269441 6 AATAGCG 230 0.0 14.605552 5 GTATAGA 110 3.5075773E-6 14.559593 1 TGTAGGA 275 0.0 14.552347 2 ACGAACG 155 3.1322998E-9 14.451821 15 CTAGCGG 310 0.0 14.451268 29 ACCGTCG 180 1.1823431E-10 14.221337 8 AGGCCCG 440 0.0 14.182021 10 CGACCCG 205 3.6379788E-12 14.045756 5 CCGATAA 160 4.8967195E-9 14.0002 9 TCCGATA 160 4.9021764E-9 13.999129 8 GTCTTAA 195 2.7284841E-11 13.962276 1 GTAGGAC 275 0.0 13.961166 3 GTATTAG 255 0.0 13.81734 1 >>END_MODULE