##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062822_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1617333 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226467894985138 32.0 32.0 32.0 32.0 32.0 2 31.321894130645948 32.0 32.0 32.0 32.0 32.0 3 31.40007345426081 32.0 32.0 32.0 32.0 32.0 4 31.49015508865521 32.0 32.0 32.0 32.0 32.0 5 31.424820986154366 32.0 32.0 32.0 32.0 32.0 6 34.96053502896435 36.0 36.0 36.0 36.0 36.0 7 34.98172794347237 36.0 36.0 36.0 36.0 36.0 8 34.91460880350552 36.0 36.0 36.0 36.0 36.0 9 35.02396043362746 36.0 36.0 36.0 36.0 36.0 10 34.880721533537 36.0 36.0 36.0 32.0 36.0 11 35.03844724617627 36.0 36.0 36.0 36.0 36.0 12 34.94754883502655 36.0 36.0 36.0 36.0 36.0 13 34.99201648640076 36.0 36.0 36.0 36.0 36.0 14 34.94354965860463 36.0 36.0 36.0 32.0 36.0 15 34.91133922327684 36.0 36.0 36.0 32.0 36.0 16 34.928542235890816 36.0 36.0 36.0 36.0 36.0 17 34.89192701812181 36.0 36.0 36.0 32.0 36.0 18 34.892505748661534 36.0 36.0 36.0 32.0 36.0 19 34.88500945692693 36.0 36.0 36.0 32.0 36.0 20 34.87567557206834 36.0 36.0 36.0 32.0 36.0 21 34.863874044491766 36.0 36.0 36.0 32.0 36.0 22 34.8474803890108 36.0 36.0 36.0 32.0 36.0 23 34.78918812637843 36.0 36.0 36.0 32.0 36.0 24 34.75779941422082 36.0 36.0 36.0 32.0 36.0 25 34.752490056160354 36.0 36.0 36.0 32.0 36.0 26 34.68836473379323 36.0 36.0 36.0 32.0 36.0 27 34.67295108675826 36.0 36.0 36.0 32.0 36.0 28 34.63772148345455 36.0 36.0 36.0 32.0 36.0 29 34.60651949845826 36.0 36.0 36.0 32.0 36.0 30 34.581200655647294 36.0 36.0 36.0 32.0 36.0 31 34.57606256720168 36.0 36.0 36.0 32.0 36.0 32 34.54767014585123 36.0 36.0 36.0 32.0 36.0 33 34.52305060244242 36.0 36.0 36.0 32.0 36.0 34 34.49962190841342 36.0 36.0 36.0 32.0 36.0 35 34.47849886201543 36.0 36.0 36.0 32.0 36.0 36 34.44970516275869 36.0 36.0 36.0 32.0 36.0 37 34.436432076758464 36.0 36.0 36.0 32.0 36.0 38 34.015260308174014 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 8.0 21 36.0 22 109.0 23 338.0 24 927.0 25 2428.0 26 5393.0 27 10094.0 28 18101.0 29 28821.0 30 43685.0 31 63400.0 32 91381.0 33 146420.0 34 359728.0 35 846460.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.48739938522728 18.525423529680932 12.176358519722259 26.81081856536953 2 15.580032065134391 20.759732225831044 37.11622776509228 26.544007943942283 3 17.640275688432748 24.55975361907535 29.26280487691774 28.537165815574156 4 12.094424645032683 16.31501757214969 36.17544202427207 35.415115758545554 5 14.085048709850545 37.02134132014948 33.45522131510413 15.43838865489584 6 33.93955844536462 36.14046846316555 16.58547322718726 13.334499864282574 7 29.83631025988544 30.775513686772253 21.082303651454744 18.30587240188756 8 27.82931079043988 33.37917098971002 19.45789963779183 19.333618582058268 9 27.502790204450108 14.016255839333692 18.564737380701366 39.91621657551484 10 15.827480028689436 26.80718719857542 31.670232236044814 25.69510053669033 11 37.52148717200373 20.886211357098865 22.506004041443344 19.086297429454056 12 24.726292209305846 23.881008602465673 28.78403687071322 22.608662317515257 13 29.630774633779584 19.395152015788966 25.29622860365095 25.677844746780497 14 23.424056765057042 19.953342941744218 25.103302783038494 31.519297510160243 15 25.096006821106105 27.639700667704176 22.17026425603138 25.094028255158342 16 25.567880395466602 25.696487420625353 23.977234083334878 24.758398100573167 17 23.880425366946696 26.015236194401524 25.45066476724336 24.653673671408423 18 24.924428055323176 24.591225183682024 26.618513317912885 23.865833443081915 19 25.67609762491707 24.8730471708671 25.480714237575068 23.97014096664076 20 25.767235318886094 24.321954724228096 25.156538573070602 24.754271383815208 21 26.81216546005059 24.188587013311423 24.45587890681758 24.54336861982041 22 25.764546651242075 24.562751842387243 24.929034316413894 24.743667189956785 23 24.103105672246436 24.135690220492897 25.82235794651806 25.938846160742607 24 24.870450303060657 25.01099031553799 25.34444050792261 24.774118873478745 25 24.879956471468407 24.54755677567349 25.46678785405576 25.10569889880235 26 24.461706069007477 25.369188268085956 25.872053480670637 24.29705218223593 27 25.24744455683805 24.82798831656085 24.99319867534928 24.931368451251814 28 24.2637106891407 24.768801477494122 25.785660714274673 25.181827119090507 29 24.499840168969534 24.861794077039175 25.65136555056998 24.98700020342131 30 24.415132814330754 24.9726556003 26.042688796926793 24.569522788442455 31 25.12401589530418 24.684588764342287 24.810660513326567 25.380734827026963 32 24.561175713350313 24.973892204017353 24.93463003599135 25.530302046640983 33 24.214184710260657 24.57026475067287 25.700582378520686 25.514968160545788 34 24.928199696661107 24.694296103523516 25.864556031441886 24.512948168373487 35 25.6095683449234 24.694048782780044 25.55466313987286 24.141719732423688 36 24.429910228753137 25.2695641528368 25.30418905692272 24.996336561487336 37 25.412824693492308 24.99868610855031 24.92739590424483 24.66109329371255 38 24.628276692726043 24.93687134119649 25.478504104290277 24.95634786178719 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 321.0 1 245.5 2 170.0 3 170.0 4 580.5 5 991.0 6 991.0 7 1158.5 8 1326.0 9 1328.0 10 1330.0 11 1330.0 12 1669.5 13 2009.0 14 2747.0 15 3485.0 16 3485.0 17 5512.5 18 7540.0 19 7540.0 20 8855.0 21 10170.0 22 11075.0 23 11980.0 24 11980.0 25 14424.5 26 16869.0 27 16869.0 28 21514.5 29 26160.0 30 32665.5 31 39171.0 32 39171.0 33 50101.5 34 61032.0 35 61032.0 36 67566.5 37 74101.0 38 83357.0 39 92613.0 40 92613.0 41 97529.5 42 102446.0 43 114091.5 44 125737.0 45 125737.0 46 129754.5 47 133772.0 48 133772.0 49 141512.5 50 149253.0 51 149810.0 52 150367.0 53 150367.0 54 142559.5 55 134752.0 56 134752.0 57 131020.5 58 127289.0 59 113803.5 60 100318.0 61 100318.0 62 94567.0 63 88816.0 64 73196.0 65 57576.0 66 57576.0 67 48242.0 68 38908.0 69 38908.0 70 31417.5 71 23927.0 72 18738.5 73 13550.0 74 13550.0 75 10091.0 76 6632.0 77 6632.0 78 6498.5 79 6365.0 80 4927.0 81 3489.0 82 3489.0 83 3378.5 84 3268.0 85 3268.0 86 2066.5 87 865.0 88 720.0 89 575.0 90 575.0 91 341.0 92 107.0 93 68.5 94 30.0 95 30.0 96 20.0 97 10.0 98 10.0 99 11.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00927452788015826 2 0.0 3 0.0 4 6.183018586772174E-5 5 6.183018586772174E-5 6 1.2366037173544347E-4 7 3.091509293386087E-4 8 0.0019167357618993738 9 0.004204452639005078 10 8.037924162803826E-4 11 0.005502886542227235 12 3.709811152063304E-4 13 6.183018586772174E-5 14 0.0 15 0.0 16 1.854905576031652E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 1.2366037173544347E-4 23 1.2366037173544347E-4 24 0.0 25 1.854905576031652E-4 26 6.183018586772174E-5 27 6.183018586772174E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 6.183018586772174E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1617333.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.0881356314915 #Duplication Level Percentage of deduplicated Percentage of total 1 79.6509657468996 43.08172238497589 2 12.45793620930579 13.476530867548014 3 3.497002452318701 5.674390288340169 4 1.4697115307390967 3.17975826455133 5 0.7457327885168097 2.0167648105073783 6 0.49040094614363866 1.591492373329733 7 0.3210508669490381 1.2155529985303253 8 0.2105111032698855 0.9108922484477184 9 0.16088323164722443 0.7831686648750967 >10 0.8248884015091248 8.006598473057533 >50 0.07482999548360315 2.8372728503001463 >100 0.0808789511311337 9.529433650481531 >500 0.0110602007901402 4.210324520511652 >1k 0.004147575296302576 3.486097604543527 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4278 0.26450953514211356 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3344 0.20676014154166147 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2061 0.1274320130733745 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1908 0.11797199463561307 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1890 0.11685905128999408 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1855 0.11469499478462383 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1817 0.11234544772165041 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1807 0.11172714586297318 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1756 0.10857380638371937 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1696 0.10486399523165607 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1660 0.10263810854041808 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1624 0.1004122218491801 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.183018586772174E-5 2 0.0 0.0 0.0 0.0 6.183018586772174E-5 3 0.0 0.0 0.0 0.0 6.183018586772174E-5 4 0.0 0.0 0.0 0.0 6.183018586772174E-5 5 6.183018586772174E-5 0.0 0.0 0.0 6.183018586772174E-5 6 6.183018586772174E-5 0.0 0.0 0.0 1.854905576031652E-4 7 6.183018586772174E-5 0.0 0.0 0.0 1.854905576031652E-4 8 6.183018586772174E-5 0.0 0.0 0.0 1.854905576031652E-4 9 6.183018586772174E-5 0.0 0.0 0.0 1.854905576031652E-4 10 6.183018586772174E-5 0.0 0.0 0.0 1.854905576031652E-4 11 6.183018586772174E-5 0.0 0.0 0.0 1.854905576031652E-4 12 6.183018586772174E-5 0.0 0.0 0.0 2.4732074347088694E-4 13 6.183018586772174E-5 0.0 0.0 0.0 3.091509293386087E-4 14 6.183018586772174E-5 0.0 0.0 0.0 3.709811152063304E-4 15 6.183018586772174E-5 0.0 0.0 0.0 4.3281130107405215E-4 16 6.183018586772174E-5 0.0 0.0 6.183018586772174E-5 5.564716728094956E-4 17 6.183018586772174E-5 0.0 0.0 6.183018586772174E-5 5.564716728094956E-4 18 6.183018586772174E-5 0.0 0.0 1.854905576031652E-4 5.564716728094956E-4 19 6.183018586772174E-5 0.0 0.0 1.854905576031652E-4 5.564716728094956E-4 20 6.183018586772174E-5 0.0 0.0 3.091509293386087E-4 5.564716728094956E-4 21 6.183018586772174E-5 0.0 0.0 3.091509293386087E-4 6.183018586772174E-4 22 6.183018586772174E-5 0.0 0.0 4.3281130107405215E-4 6.183018586772174E-4 23 6.183018586772174E-5 0.0 0.0 8.037924162803826E-4 8.037924162803826E-4 24 6.183018586772174E-5 0.0 0.0 9.892829738835478E-4 8.037924162803826E-4 25 6.183018586772174E-5 0.0 0.0 0.0014839244608253217 8.656226021481043E-4 26 6.183018586772174E-5 0.0 0.0 0.0019167357618993738 8.656226021481043E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 385 0.0 20.36344 29 CATCGTT 410 0.0 19.121767 28 CGGCATC 435 0.0 18.758438 25 CGTTTAT 440 0.0 17.454376 31 AGGGGCG 360 0.0 16.888725 32 TCGTTTA 455 0.0 16.878958 30 GGCATCG 485 0.0 16.82458 26 TCTAGCG 290 0.0 16.551565 28 CTAGCGG 300 0.0 15.9998455 29 GCATCGT 525 0.0 15.8474655 27 GTAGGAC 705 0.0 15.432952 3 CGCATCG 545 0.0 15.265907 13 CGTACAT 95 1.4332403E-5 15.157748 26 TAACCCG 180 7.2759576E-12 15.110966 28 GTCCTAC 525 0.0 14.934575 1 TAAACGC 375 0.0 14.933189 28 GCATCGC 580 0.0 14.896409 14 CAATTGG 65 0.004160255 14.770457 1 TAGCGGC 315 0.0 14.730017 30 ACCGTCG 360 0.0 14.666979 8 >>END_MODULE