##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062821_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1725981 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.214789734070074 32.0 32.0 32.0 32.0 32.0 2 30.840592103852824 32.0 32.0 32.0 32.0 32.0 3 30.893575305869533 32.0 32.0 32.0 32.0 32.0 4 30.95395372254967 32.0 32.0 32.0 32.0 32.0 5 30.882680632057944 32.0 32.0 32.0 32.0 32.0 6 34.52733025450454 36.0 36.0 36.0 32.0 36.0 7 34.44585832636628 36.0 36.0 36.0 32.0 36.0 8 34.42371323902175 36.0 36.0 36.0 32.0 36.0 9 34.557206597291625 36.0 36.0 36.0 32.0 36.0 10 34.28921986974364 36.0 36.0 36.0 32.0 36.0 11 34.558065239420365 36.0 36.0 36.0 32.0 36.0 12 34.37567736840672 36.0 36.0 36.0 32.0 36.0 13 34.45964121273641 36.0 36.0 36.0 32.0 36.0 14 34.3724363130301 36.0 36.0 36.0 32.0 36.0 15 34.314444365262425 36.0 36.0 36.0 32.0 36.0 16 34.33360911852448 36.0 36.0 36.0 32.0 36.0 17 34.26270625227045 36.0 36.0 36.0 32.0 36.0 18 34.28886123311902 36.0 36.0 36.0 32.0 36.0 19 34.2653667682321 36.0 36.0 36.0 32.0 36.0 20 34.234981149850434 36.0 36.0 36.0 32.0 36.0 21 34.2082479471095 36.0 36.0 36.0 32.0 36.0 22 34.189163148377645 36.0 36.0 36.0 32.0 36.0 23 34.13919620204394 36.0 36.0 36.0 32.0 36.0 24 34.12821693865691 36.0 36.0 36.0 32.0 36.0 25 34.10288178143328 36.0 36.0 36.0 32.0 36.0 26 34.070914453867104 36.0 36.0 36.0 32.0 36.0 27 34.06298273271838 36.0 36.0 36.0 32.0 36.0 28 34.037929733873085 36.0 36.0 36.0 32.0 36.0 29 33.997395683961756 36.0 36.0 36.0 32.0 36.0 30 33.955344815499124 36.0 36.0 36.0 32.0 36.0 31 33.97648757431281 36.0 36.0 36.0 32.0 36.0 32 33.928860167058616 36.0 36.0 36.0 32.0 36.0 33 33.905840214927046 36.0 36.0 36.0 32.0 36.0 34 33.88534404492286 36.0 36.0 36.0 32.0 36.0 35 33.84205388124203 36.0 36.0 36.0 32.0 36.0 36 33.795570171398175 36.0 36.0 36.0 32.0 36.0 37 33.78481744584674 36.0 36.0 36.0 32.0 36.0 38 33.17649209348191 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 2.0 9 8.0 10 23.0 11 9.0 12 8.0 13 6.0 14 191.0 15 443.0 16 611.0 17 674.0 18 913.0 19 1212.0 20 1565.0 21 2292.0 22 3259.0 23 5260.0 24 7741.0 25 11486.0 26 16996.0 27 24627.0 28 34356.0 29 46486.0 30 62503.0 31 83636.0 32 113521.0 33 168221.0 34 373800.0 35 766127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.19217940224775 17.515073747373624 11.696961118607216 25.595785731771407 2 15.90394733485912 19.720152671401706 39.32216123713922 25.05373875659995 3 18.823640529336846 24.167015300889684 28.976081567660344 28.03326260211313 4 12.134782374416472 15.601565075614612 36.590218682988755 35.67343386698016 5 13.991164414316545 37.179623111574614 33.9317197526036 14.897492721505238 6 33.51344461375342 36.131914227941394 17.1813530942021 13.173288064103083 7 29.831209034166655 30.882726982510235 20.94970917988089 18.336354803442216 8 27.45283100856038 34.3044945610452 19.523805385361896 18.71886904503252 9 27.618144885148908 14.159193591560475 18.975778314157687 39.24688320913293 10 15.83590676547101 26.998151763935642 31.995863195768177 25.17007827482517 11 37.158903066678484 20.933648292320875 23.08181227725893 18.825636363741708 12 25.132189602127546 23.79076787586982 29.405827582810428 21.671214939192204 13 29.93095655449159 19.854959509771255 25.388633762621502 24.825450173115645 14 23.06134084893547 20.822073063890343 25.527050141612857 30.58953594556133 15 24.58349849672339 28.855493044592954 22.719760032082263 23.84124842660139 16 24.613162219229707 26.05070843000415 25.63003103509817 23.706098315667973 17 23.158258297587768 26.595569597513247 26.29753213623841 23.948639968660576 18 23.940304664762728 24.801827687283772 28.430955033817195 22.8269126141363 19 25.295910444647884 25.085116985155224 26.07529000034765 23.543682569849235 20 25.50452581236912 24.6581160429648 26.258634735479564 23.578723409186512 21 26.327481442810946 24.41761627829497 24.870776142735217 24.384126136158866 22 25.27184981872816 25.5420338022587 25.50292288892327 23.683193490089874 23 23.35056970416176 25.396336093006873 26.508800515468696 24.744293687362674 24 24.448248307528807 25.54500093004066 26.396234407332315 23.610516355098216 25 24.39687403660942 25.226751719326224 26.437002079185202 23.939372164879156 26 23.160712888729208 26.485479426652486 27.147720720538 23.206086964080306 27 24.185594285412982 25.858877096166538 26.15241718617545 23.803111432245025 28 23.207371050364248 25.930550493746114 26.36087994173431 24.50119851415533 29 23.510627572004537 25.688175993195017 26.342831183791343 24.458365251009102 30 23.272942598383363 25.930470987475136 26.92216994113888 23.874416473002626 31 24.576116512842383 25.29528294726132 25.691311192447706 24.437289347448587 32 23.565437821394944 26.105830375896282 25.681581806330122 24.647149996378648 33 23.073722855278756 25.745056615843165 26.821111086646404 24.360109442231675 34 24.040371497509522 25.846751482814646 26.807017381206787 23.305859638469045 35 24.474735498944778 25.920408042640037 26.631480985709004 22.97337547270618 36 23.28118363342734 26.40118395792638 26.28969535914221 24.027937049504068 37 24.19845209544233 26.338192288058355 25.440994033550485 24.02236158294883 38 23.56525699293811 26.744613195324828 25.79762023403659 23.892509577700473 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 142.0 1 196.0 2 250.0 3 250.0 4 717.0 5 1184.0 6 1184.0 7 1555.5 8 1927.0 9 2014.5 10 2102.0 11 2102.0 12 2647.5 13 3193.0 14 4065.5 15 4938.0 16 4938.0 17 7405.0 18 9872.0 19 9872.0 20 11824.5 21 13777.0 22 14671.0 23 15565.0 24 15565.0 25 19149.0 26 22733.0 27 22733.0 28 29633.0 29 36533.0 30 46377.0 31 56221.0 32 56221.0 33 68684.0 34 81147.0 35 81147.0 36 87512.5 37 93878.0 38 103635.0 39 113392.0 40 113392.0 41 115125.0 42 116858.0 43 125419.5 44 133981.0 45 133981.0 46 136461.5 47 138942.0 48 138942.0 49 144158.5 50 149375.0 51 147051.5 52 144728.0 53 144728.0 54 137306.5 55 129885.0 56 129885.0 57 125146.5 58 120408.0 59 107557.0 60 94706.0 61 94706.0 62 89757.5 63 84809.0 64 70028.5 65 55248.0 66 55248.0 67 46701.0 68 38154.0 69 38154.0 70 30774.0 71 23394.0 72 18487.0 73 13580.0 74 13580.0 75 10378.5 76 7177.0 77 7177.0 78 6879.0 79 6581.0 80 5140.5 81 3700.0 82 3700.0 83 3681.5 84 3663.0 85 3663.0 86 2504.0 87 1345.0 88 1121.5 89 898.0 90 898.0 91 660.5 92 423.0 93 366.5 94 310.0 95 310.0 96 277.0 97 244.0 98 244.0 99 481.0 100 718.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12300251277389497 2 0.056141985340510694 3 0.011529675008009938 4 0.003360407791279278 5 3.4762839220130464E-4 6 6.373187190357252E-4 7 0.0 8 3.4762839220130464E-4 9 4.0556645756818874E-4 10 6.373187190357252E-4 11 0.0024333987454091327 12 0.0029548413337110897 13 0.014832144733922331 14 0.008632771739665732 15 0.024160173257990674 16 0.011182046615808633 17 0.020799765466711393 18 0.004866797490818265 19 0.007010505909392978 20 0.005967620732789063 21 0.005793806536688411 22 0.006952567844026093 23 0.01002328530847095 24 0.014484516341721026 25 0.017671109936899652 26 0.01888780930960422 27 0.008806585935766385 28 0.005446178144487107 29 0.010834418223607329 30 0.0031286555298117415 31 0.005446178144487107 32 0.0061414349288897154 33 0.00805339108599689 34 0.012109055661678778 35 0.016164720237360666 36 0.014136887949519722 37 0.009501842720168994 38 0.005619992340587758 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1725981.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.23701259156167 #Duplication Level Percentage of deduplicated Percentage of total 1 76.60232983477768 39.24874538287464 2 13.733570259107609 14.073342245859868 3 4.512221239543661 6.935782093992317 4 1.8705366917852697 3.833628481199199 5 0.9716915295936219 2.4893285568451113 6 0.5320737553355467 1.6357121821060143 7 0.3612019337126101 1.2954835618010598 8 0.2358336131112244 0.966672784359463 9 0.1673585812854684 0.7717458362966498 >10 0.8204542191041164 7.636394984742396 >50 0.08651527764406931 3.0924433866349483 >100 0.08993422933246861 9.973317220671547 >500 0.01138380116556683 3.9458931613561448 >1k 0.004781196489538069 3.7338154753693753 >5k 1.138380116556683E-4 0.36769464589125267 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 6304 0.3652415640728374 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4314 0.24994481399273805 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2398 0.1389354807497881 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2196 0.12723199154567752 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1935 0.11211015648492076 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1899 0.11002438613171292 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1856 0.1075330493209369 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1807 0.1046940841179596 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1801 0.10434645572575828 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1788 0.10359326087598877 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1777 0.10295594215695306 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 1751 0.10144955245741406 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1587613073376821E-4 2 0.0 0.0 0.0 0.0 1.1587613073376821E-4 3 0.0 0.0 0.0 0.0 1.1587613073376821E-4 4 0.0 0.0 0.0 0.0 1.1587613073376821E-4 5 0.0 5.7938065366884106E-5 0.0 0.0 1.1587613073376821E-4 6 0.0 5.7938065366884106E-5 0.0 0.0 2.3175226146753642E-4 7 0.0 1.1587613073376821E-4 0.0 5.7938065366884106E-5 2.3175226146753642E-4 8 0.0 1.1587613073376821E-4 0.0 5.7938065366884106E-5 2.3175226146753642E-4 9 0.0 1.1587613073376821E-4 0.0 5.7938065366884106E-5 2.3175226146753642E-4 10 0.0 1.1587613073376821E-4 0.0 5.7938065366884106E-5 2.3175226146753642E-4 11 0.0 1.1587613073376821E-4 0.0 5.7938065366884106E-5 2.3175226146753642E-4 12 0.0 1.1587613073376821E-4 0.0 5.7938065366884106E-5 4.0556645756818874E-4 13 0.0 1.1587613073376821E-4 0.0 5.7938065366884106E-5 5.793806536688411E-4 14 0.0 1.1587613073376821E-4 0.0 5.7938065366884106E-5 5.793806536688411E-4 15 0.0 1.1587613073376821E-4 0.0 1.1587613073376821E-4 7.531948497694934E-4 16 0.0 1.1587613073376821E-4 0.0 1.1587613073376821E-4 7.531948497694934E-4 17 0.0 1.1587613073376821E-4 0.0 1.1587613073376821E-4 7.531948497694934E-4 18 0.0 1.7381419610065232E-4 0.0 1.7381419610065232E-4 7.531948497694934E-4 19 0.0 1.7381419610065232E-4 0.0 2.3175226146753642E-4 7.531948497694934E-4 20 0.0 1.7381419610065232E-4 0.0 2.3175226146753642E-4 9.270090458701457E-4 21 0.0 1.7381419610065232E-4 0.0 2.3175226146753642E-4 0.001042885176603914 22 0.0 1.7381419610065232E-4 0.0 6.952567844026093E-4 0.001042885176603914 23 0.0 1.7381419610065232E-4 0.0 0.0012166993727045663 0.001042885176603914 24 0.0 1.7381419610065232E-4 0.0 0.0018540180917402914 0.001042885176603914 25 0.0 1.7381419610065232E-4 0.0 0.0023754606800422485 0.001042885176603914 26 0.0 1.7381419610065232E-4 0.0 0.003302469725912394 0.0011008232419707981 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACCG 55 2.2235563E-6 23.267967 5 ATCGGTA 70 1.7881332E-5 18.285683 21 GTCCTAT 400 0.0 18.01824 1 TTAGGAC 925 0.0 17.640144 3 GTAGGAC 1665 0.0 17.390339 3 TAGGACC 1180 0.0 16.945194 4 TAGGACG 1680 0.0 16.853207 4 TCTAGCG 420 0.0 16.759932 28 TGTAGGA 1720 0.0 16.748524 2 AGGACGT 1715 0.0 16.696291 5 GTCCTAA 710 0.0 16.692955 1 AAGACGG 480 0.0 16.663258 5 GTCCTAC 1335 0.0 16.196173 1 CGATTAA 90 8.585941E-6 15.999971 24 CTAGCGG 440 0.0 15.999044 29 AACGAAT 240 0.0 15.999043 31 GGACGTG 1730 0.0 15.90426 6 GACGTGA 900 0.0 15.820818 7 CAAGACG 500 0.0 15.676336 4 CTGTAGG 1830 0.0 15.666134 1 >>END_MODULE