##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062820_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1718865 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17555421746327 32.0 32.0 32.0 32.0 32.0 2 31.261898403888612 32.0 32.0 32.0 32.0 32.0 3 31.353544926448556 32.0 32.0 32.0 32.0 32.0 4 31.46287812015487 32.0 32.0 32.0 32.0 32.0 5 31.37527729053765 32.0 32.0 32.0 32.0 32.0 6 34.892695470557605 36.0 36.0 36.0 36.0 36.0 7 34.92015254252079 36.0 36.0 36.0 36.0 36.0 8 34.851319911685906 36.0 36.0 36.0 32.0 36.0 9 34.97357209553979 36.0 36.0 36.0 36.0 36.0 10 34.814849333717305 36.0 36.0 36.0 32.0 36.0 11 34.9973278878795 36.0 36.0 36.0 36.0 36.0 12 34.88826056729295 36.0 36.0 36.0 32.0 36.0 13 34.95254717502538 36.0 36.0 36.0 36.0 36.0 14 34.8910222734188 36.0 36.0 36.0 32.0 36.0 15 34.864877695456016 36.0 36.0 36.0 32.0 36.0 16 34.86493529160231 36.0 36.0 36.0 32.0 36.0 17 34.838035564165885 36.0 36.0 36.0 32.0 36.0 18 34.83855916549584 36.0 36.0 36.0 32.0 36.0 19 34.833504085544824 36.0 36.0 36.0 32.0 36.0 20 34.816488787659296 36.0 36.0 36.0 32.0 36.0 21 34.80337490146114 36.0 36.0 36.0 32.0 36.0 22 34.79241534384609 36.0 36.0 36.0 32.0 36.0 23 34.7306734385772 36.0 36.0 36.0 32.0 36.0 24 34.70273872584525 36.0 36.0 36.0 32.0 36.0 25 34.679216226986995 36.0 36.0 36.0 32.0 36.0 26 34.61541773204993 36.0 36.0 36.0 32.0 36.0 27 34.60339468195583 36.0 36.0 36.0 32.0 36.0 28 34.5653608631277 36.0 36.0 36.0 32.0 36.0 29 34.52250234893374 36.0 36.0 36.0 32.0 36.0 30 34.50588673339675 36.0 36.0 36.0 32.0 36.0 31 34.50652087278524 36.0 36.0 36.0 32.0 36.0 32 34.469880415274034 36.0 36.0 36.0 32.0 36.0 33 34.43719140246616 36.0 36.0 36.0 32.0 36.0 34 34.415120442850366 36.0 36.0 36.0 32.0 36.0 35 34.38427392494466 36.0 36.0 36.0 32.0 36.0 36 34.347885377851085 36.0 36.0 36.0 32.0 36.0 37 34.34185814476413 36.0 36.0 36.0 32.0 36.0 38 33.893504725502005 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 7.0 21 41.0 22 136.0 23 421.0 24 1144.0 25 2788.0 26 6074.0 27 11556.0 28 20469.0 29 32520.0 30 49178.0 31 71360.0 32 102531.0 33 164578.0 34 398520.0 35 857542.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.92818393180057 18.389689094933217 12.062204286435751 26.61992268683046 2 15.715370317040605 20.55053770947689 36.84320758174726 26.89088439173524 3 17.90542014643384 24.461839644183808 28.82442774737981 28.808312462002544 4 11.790081798401266 15.909672690038745 36.234946417974705 36.06529909358528 5 14.098505814599536 37.087248954686906 33.119451637506884 15.694793593206672 6 34.49835035916268 36.012843403676506 16.328389937743584 13.16041629941723 7 30.18703708336412 30.61249423308629 20.712950524680064 18.487518158869527 8 28.2465549079544 33.10546409110426 19.21094796319805 19.437033037743294 9 27.489988614103034 13.718464061699112 18.324137927022043 40.46740939717581 10 15.726077637865274 26.467781984720034 31.32718814650709 26.478952230907606 11 38.122918562408806 20.758870909560592 22.086976455173602 19.031234072857007 12 24.814775382972076 23.707994663902042 28.511646388679935 22.96558356444595 13 29.621773450371876 19.000514293161064 25.331207122843924 26.04650513362314 14 23.531516436718416 19.898712231617957 24.80084241636196 31.768928915301668 15 25.202968237761546 27.50215985548603 22.1163965756473 25.178475331105123 16 25.866110329909947 25.551600098437167 23.81626691597876 24.766022655674128 17 23.947372248547733 25.83326788316709 25.303790582739193 24.915569285545985 18 25.181093337754856 24.24553411698999 26.65194765150259 23.92142489375256 19 25.78306033341769 24.63736244556728 25.38006184313486 24.19951537788017 20 25.795568587410877 23.96767634456458 25.091150264855006 25.145604803169537 21 27.181340223159147 23.99900399275568 24.142470924093427 24.677184859991748 22 25.83172713590321 24.25044927955282 25.0574944018226 24.86032918272137 23 24.124144856221815 23.865369142276027 25.782973977565405 26.227512023936754 24 24.79863165519107 24.9327899515087 25.33561390801488 24.932964485285346 25 24.912951278896248 24.367300515165528 25.432247442352946 25.287500763585275 26 24.408315952678077 25.380352732762606 25.949332844638757 24.26199846992056 27 25.42291037738319 24.605218682349904 24.92095065168079 25.05092028858612 28 24.215456129480792 24.655804847966536 25.951369072033 25.177369950519672 29 24.38196135240406 24.620083601679017 25.83687491455117 25.161080131365754 30 24.36572971117569 24.877346388459827 26.07522987552833 24.68169402483616 31 25.148106453968172 24.584885956721443 24.758314352785124 25.508693236525264 32 24.593729001404995 24.91079869565091 24.844592216375343 25.650880086568755 33 24.253039069385903 24.26775808454998 25.690964677272504 25.788238168791615 34 25.055079951014186 24.671629243716055 25.77689347330942 24.496397331960335 35 25.871083534774403 24.43984838832602 25.53423334584159 24.154834731057996 36 24.37509635718919 25.288722500021816 25.142288661413197 25.19389248137579 37 25.666820838169375 24.94425100284199 24.814397873015043 24.57453028597359 38 24.666684120044334 24.701998120853006 25.451097090231055 25.180220668871613 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 81.0 2 94.0 3 94.0 4 521.0 5 948.0 6 948.0 7 1246.5 8 1545.0 9 1553.0 10 1561.0 11 1561.0 12 2034.0 13 2507.0 14 3327.5 15 4148.0 16 4148.0 17 6248.0 18 8348.0 19 8348.0 20 9862.0 21 11376.0 22 12216.0 23 13056.0 24 13056.0 25 15588.5 26 18121.0 27 18121.0 28 23601.5 29 29082.0 30 35139.0 31 41196.0 32 41196.0 33 52918.0 34 64640.0 35 64640.0 36 70366.5 37 76093.0 38 86126.5 39 96160.0 40 96160.0 41 100350.0 42 104540.0 43 117646.0 44 130752.0 45 130752.0 46 134219.5 47 137687.0 48 137687.0 49 145843.5 50 154000.0 51 154740.0 52 155480.0 53 155480.0 54 147981.0 55 140482.0 56 140482.0 57 137649.0 58 134816.0 59 121456.0 60 108096.0 61 108096.0 62 103939.0 63 99782.0 64 83049.0 65 66316.0 66 66316.0 67 56174.0 68 46032.0 69 46032.0 70 37346.0 71 28660.0 72 22591.5 73 16523.0 74 16523.0 75 12531.5 76 8540.0 77 8540.0 78 8190.5 79 7841.0 80 6125.5 81 4410.0 82 4410.0 83 4147.0 84 3884.0 85 3884.0 86 2499.5 87 1115.0 88 910.0 89 705.0 90 705.0 91 421.0 92 137.0 93 107.0 94 77.0 95 77.0 96 53.0 97 29.0 98 29.0 99 23.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008203087502508923 2 0.0 3 0.0 4 2.9088962774854337E-4 5 1.1635585109941734E-4 6 3.4906755329825205E-4 7 4.6542340439766934E-4 8 0.002501650798637473 9 0.004188810639579025 10 7.563130321462128E-4 11 0.005875970480520576 12 3.4906755329825205E-4 13 5.817792554970867E-5 14 0.0 15 0.0 16 1.1635585109941734E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 1.1635585109941734E-4 22 1.1635585109941734E-4 23 1.1635585109941734E-4 24 0.0 25 0.0 26 0.0 27 1.1635585109941734E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1718865.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.811086951460226 #Duplication Level Percentage of deduplicated Percentage of total 1 74.44778745559141 34.10534064471928 2 14.678179369301288 13.448467027523819 3 4.833334554808446 6.642609286674809 4 2.0845484686412448 3.8198172460582933 5 1.0646812758327189 2.438710325138215 6 0.6503060071419787 1.7874735022942863 7 0.4034093380621816 1.2936434184098333 8 0.2879764183471934 1.055401019269869 9 0.21469559102919317 0.885189454986016 >10 1.1051255593756981 9.198295703564055 >50 0.09815067641103215 3.168368255474272 >100 0.10817761735229636 11.018927914135961 >500 0.015453772112133285 4.959540253505962 >1k 0.0080461788683008 5.867184213969331 >5k 1.277171248936635E-4 0.3110317342759797 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5316 0.30927385222225134 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3835 0.22311234448313277 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2819 0.16400357212462874 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2509 0.14596841520421905 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2488 0.1447466787676752 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2483 0.14445578913992665 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2417 0.14061604605364586 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2398 0.1395106654682014 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2326 0.13532185482862238 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2234 0.12996948567804917 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2197 0.12781690243270996 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2166 0.126013386740669 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2054 0.1194974590791016 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2022 0.11763576546151093 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2009 0.11687945242936472 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1866 0.1085600090757564 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1857 0.10803640774580901 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1838 0.10693102716036454 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1838 0.10693102716036454 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1826 0.10623289205376804 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1770 0.10297492822298436 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1766 0.10274221652078552 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.8177925549708675E-5 2 0.0 0.0 0.0 0.0 5.8177925549708675E-5 3 0.0 0.0 0.0 0.0 5.8177925549708675E-5 4 0.0 0.0 0.0 0.0 5.8177925549708675E-5 5 0.0 0.0 0.0 0.0 5.8177925549708675E-5 6 0.0 0.0 0.0 0.0 1.1635585109941735E-4 7 0.0 0.0 0.0 0.0 1.1635585109941735E-4 8 0.0 0.0 0.0 0.0 1.1635585109941735E-4 9 0.0 0.0 0.0 0.0 1.1635585109941735E-4 10 0.0 0.0 0.0 0.0 1.1635585109941735E-4 11 0.0 0.0 0.0 0.0 1.7453377664912602E-4 12 0.0 0.0 0.0 0.0 6.399571810467954E-4 13 0.0 0.0 0.0 0.0 6.981351065965041E-4 14 0.0 0.0 0.0 0.0 6.981351065965041E-4 15 0.0 0.0 0.0 5.8177925549708675E-5 8.144909576959214E-4 16 0.0 0.0 0.0 1.1635585109941735E-4 8.144909576959214E-4 17 5.8177925549708675E-5 0.0 0.0 2.327117021988347E-4 8.144909576959214E-4 18 5.8177925549708675E-5 0.0 0.0 3.4906755329825205E-4 9.308468087953388E-4 19 5.8177925549708675E-5 0.0 0.0 3.4906755329825205E-4 9.308468087953388E-4 20 5.8177925549708675E-5 0.0 0.0 4.654234043976694E-4 9.890247343450475E-4 21 5.8177925549708675E-5 0.0 0.0 4.654234043976694E-4 9.890247343450475E-4 22 5.8177925549708675E-5 0.0 0.0 8.726688832456301E-4 0.0012217364365438822 23 5.8177925549708675E-5 0.0 0.0 0.0015708039898421342 0.0012217364365438822 24 5.8177925549708675E-5 0.0 0.0 0.0024434728730877643 0.0012217364365438822 25 5.8177925549708675E-5 0.0 0.0 0.002850718351935725 0.0012217364365438822 26 5.8177925549708675E-5 0.0 0.0 0.003548853458532229 0.0012217364365438822 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATCGTT 550 0.0 18.90842 28 CCCTATA 70 1.7886443E-5 18.285067 2 GACTACG 45 0.008847884 17.779215 1 CTAGCGG 585 0.0 17.777147 29 TAGCGGC 615 0.0 17.69043 30 ATCGTTT 595 0.0 17.478373 29 TATTAGT 75 3.2361833E-5 17.066061 2 CGTTTAT 600 0.0 17.066061 31 CCTATAC 85 4.9857463E-6 16.941563 3 TCTAGCG 620 0.0 16.7736 28 TCGTTTA 615 0.0 16.649817 30 CGGCATC 635 0.0 16.377373 25 ACCGTCG 480 0.0 16.33513 8 CGACCGT 60 0.0024407743 16.00176 6 TAGTACG 80 5.6251636E-5 15.9994335 2 TGTAGGA 650 0.0 15.999433 2 GGCATCG 655 0.0 15.8773 26 GTCCTAC 585 0.0 15.864531 1 TACCGTC 515 0.0 15.535689 7 AACCGCG 280 0.0 15.430269 7 >>END_MODULE