##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062818_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1124401 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.235364429594068 32.0 32.0 32.0 32.0 32.0 2 30.895963272889297 32.0 32.0 32.0 32.0 32.0 3 30.94689439088012 32.0 32.0 32.0 32.0 32.0 4 31.003724649835778 32.0 32.0 32.0 32.0 32.0 5 30.947587204209174 32.0 32.0 32.0 32.0 32.0 6 34.589766462320824 36.0 36.0 36.0 32.0 36.0 7 34.50089603264316 36.0 36.0 36.0 32.0 36.0 8 34.49909863118229 36.0 36.0 36.0 32.0 36.0 9 34.59013465836477 36.0 36.0 36.0 32.0 36.0 10 34.35547371444885 36.0 36.0 36.0 32.0 36.0 11 34.59109161233403 36.0 36.0 36.0 32.0 36.0 12 34.41717501140607 36.0 36.0 36.0 32.0 36.0 13 34.507966463921676 36.0 36.0 36.0 32.0 36.0 14 34.407024718049875 36.0 36.0 36.0 32.0 36.0 15 34.353047533753525 36.0 36.0 36.0 32.0 36.0 16 34.364129878931095 36.0 36.0 36.0 32.0 36.0 17 34.27399299716026 36.0 36.0 36.0 32.0 36.0 18 34.30872793602994 36.0 36.0 36.0 32.0 36.0 19 34.299404749728964 36.0 36.0 36.0 32.0 36.0 20 34.278559873212494 36.0 36.0 36.0 32.0 36.0 21 34.246357838529136 36.0 36.0 36.0 32.0 36.0 22 34.22327977296356 36.0 36.0 36.0 32.0 36.0 23 34.17217078248774 36.0 36.0 36.0 32.0 36.0 24 34.14699026414954 36.0 36.0 36.0 32.0 36.0 25 34.13061976999309 36.0 36.0 36.0 32.0 36.0 26 34.082582637333125 36.0 36.0 36.0 32.0 36.0 27 34.08786900758715 36.0 36.0 36.0 32.0 36.0 28 34.074938567290495 36.0 36.0 36.0 32.0 36.0 29 34.03232743478528 36.0 36.0 36.0 32.0 36.0 30 34.01125221340074 36.0 36.0 36.0 32.0 36.0 31 34.03299534596643 36.0 36.0 36.0 32.0 36.0 32 33.97392389369985 36.0 36.0 36.0 32.0 36.0 33 33.925043645461 36.0 36.0 36.0 32.0 36.0 34 33.93357085239163 36.0 36.0 36.0 32.0 36.0 35 33.88607089463635 36.0 36.0 36.0 32.0 36.0 36 33.847379182337974 36.0 36.0 36.0 32.0 36.0 37 33.83875325617818 36.0 36.0 36.0 32.0 36.0 38 33.21668248249512 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 6.0 10 13.0 11 9.0 12 6.0 13 8.0 14 232.0 15 455.0 16 528.0 17 597.0 18 732.0 19 865.0 20 1216.0 21 1679.0 22 2312.0 23 3534.0 24 5107.0 25 7409.0 26 10784.0 27 15253.0 28 21226.0 29 28541.0 30 38566.0 31 51559.0 32 70359.0 33 105491.0 34 239808.0 35 518104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.727662825559854 17.427185633114785 11.304981981733297 25.54016955959207 2 16.961069425064785 20.22738274909588 36.77892829683629 26.03261952900305 3 18.384555720801814 24.73030861518099 28.54165628935964 28.343479374657548 4 12.306091411190266 15.393420315376611 36.046675026903955 36.25381324652916 5 14.809040546922317 36.534030119147886 32.80849092094368 15.848438412986116 6 33.9312538187135 35.8307608433676 16.93031909547962 13.30766624243928 7 30.166461965081854 30.59771380495037 21.186836368875518 18.04898786109226 8 28.697527570259695 31.509694059053718 19.85112059765208 19.941657773034507 9 28.01327642589508 13.830588607780689 18.814940248079196 39.341194718245035 10 16.726995245455793 25.49835556448873 30.14759898185518 27.6270502082003 11 38.23824998977216 21.01776798276742 21.787435231086942 18.956546796373473 12 25.4123657243282 23.86002422698659 27.83417499284041 22.893435055844805 13 29.394419454434022 18.655396107725576 25.45624682559661 26.49393761224379 14 24.358909360977325 20.152095313062855 24.333471197505993 31.15552412845383 15 25.561477156172803 26.690880883311852 22.385874269325782 25.36176769118957 16 26.475200374286985 25.215450723179732 23.351131533233534 24.958217369299753 17 24.270264211767927 25.52425158382955 24.841350182445066 25.364134021957458 18 25.914699496856354 23.506867639511853 26.360920405112015 24.217512458519778 19 25.989981446464245 24.616521719021556 25.198565525289197 24.194931309225005 20 26.067953781964793 23.282366366248844 24.738976255044147 25.91070359674222 21 28.384408422831477 23.59673581926934 23.63462521957619 24.384230538322992 22 26.55103467536649 23.552850893967346 24.616966434643704 25.27914799602246 23 24.082420089496562 23.22063099434398 25.655947892401333 27.041001023758128 24 25.08841528499253 24.9935067245428 24.710026328897744 25.208051661566927 25 25.114837217576948 23.858566091442803 24.938534068671057 26.0880626223092 26 24.802166912771977 25.40411677845185 25.569214894411928 24.224501414364248 27 26.10676811170102 24.068053797651313 24.358549018177744 25.46662907246993 28 24.49730329723499 24.114143814660384 25.86539966700346 25.523153221101165 29 24.372324367788078 24.44730655618283 25.823403159569747 25.356965916459345 30 24.172022277443467 24.873217439872782 26.291172091649873 24.66358819103388 31 25.418650073643988 24.793387694694076 23.95164044656008 25.836321785101855 32 24.77673191197176 24.520221538155027 24.087782759549984 26.615263790323223 33 24.305191749910833 23.820980643118446 25.234478605856253 26.63934900111447 34 25.75786821129671 24.215758393010738 25.228087621938037 24.798285773754515 35 26.84451165273083 23.740348692403487 25.284113147126845 24.131026507738838 36 24.584736520948635 25.169939140350785 24.52202670993199 25.72329762876859 37 26.102908802723885 25.034221993334384 24.50196882085109 24.360900383090645 38 24.614991901822155 24.44128798828099 25.243456752350518 25.700263357546337 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 832.0 1 617.5 2 403.0 3 403.0 4 786.5 5 1170.0 6 1170.0 7 1308.0 8 1446.0 9 1377.5 10 1309.0 11 1309.0 12 1700.0 13 2091.0 14 2530.0 15 2969.0 16 2969.0 17 4339.0 18 5709.0 19 5709.0 20 6674.5 21 7640.0 22 7749.0 23 7858.0 24 7858.0 25 9034.0 26 10210.0 27 10210.0 28 13068.0 29 15926.0 30 19502.0 31 23078.0 32 23078.0 33 30711.0 34 38344.0 35 38344.0 36 41824.5 37 45305.0 38 52620.0 39 59935.0 40 59935.0 41 62136.5 42 64338.0 43 75215.5 44 86093.0 45 86093.0 46 86411.0 47 86729.0 48 86729.0 49 94078.5 50 101428.0 51 102439.0 52 103450.0 53 103450.0 54 97717.5 55 91985.0 56 91985.0 57 91374.0 58 90763.0 59 80768.0 60 70773.0 61 70773.0 62 71124.5 63 71476.0 64 58748.0 65 46020.0 66 46020.0 67 39253.5 68 32487.0 69 32487.0 70 26361.0 71 20235.0 72 15632.5 73 11030.0 74 11030.0 75 8269.5 76 5509.0 77 5509.0 78 5858.0 79 6207.0 80 4973.0 81 3739.0 82 3739.0 83 3976.0 84 4213.0 85 4213.0 86 2747.0 87 1281.0 88 1099.5 89 918.0 90 918.0 91 670.5 92 423.0 93 369.0 94 315.0 95 315.0 96 261.5 97 208.0 98 208.0 99 382.0 100 556.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12219839719103771 2 0.05843111132060537 3 0.013607245102058784 4 0.0027570235174106035 5 0.0 6 3.5574496998846494E-4 7 0.0 8 8.893624249711624E-5 9 1.7787248499423247E-4 10 2.6680872749134874E-4 11 0.0016897886074452087 12 0.0031127684873990687 13 0.015474906194498227 14 0.009427241704694321 15 0.02383491298922715 16 0.011561711524625111 17 0.020188527046845386 18 0.0062255369747981374 19 0.007737453097249113 20 0.006937026914775067 21 0.006759154429780835 22 0.007737453097249113 23 0.009960859159677019 24 0.014318735042035714 25 0.017876184741920365 26 0.01965490959186269 27 0.010138731644671252 28 0.005780855762312556 29 0.011917456494613576 30 0.0031127684873990687 31 0.006492345702289486 32 0.007114899399769299 33 0.008715751764717393 34 0.014407671284532832 35 0.017876184741920365 36 0.015563842436995342 37 0.011028094069642414 38 0.006581281944786602 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1124401.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.65813489538133 #Duplication Level Percentage of deduplicated Percentage of total 1 80.57339965379138 37.5940455002607 2 12.166595182997671 11.35341278531604 3 3.445619627391346 4.822985561189969 4 1.316006304888161 2.4560959878657656 5 0.6402062902990238 1.4935415726821755 6 0.37137130849014255 1.0396495564684405 7 0.24294487331698905 0.7934748269955781 8 0.1573294722535825 0.5872559791541445 9 0.13014542121244854 0.5465108357051982 >10 0.6793080519858252 6.0870219825249725 >50 0.10770135715979515 3.5733367765565065 >100 0.1357652948081285 14.238227440485455 >500 0.02329587324702941 7.640044018271711 >1k 0.010311288158521214 7.774397176523361 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3755 0.33395559057667146 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2602 0.23141210297749648 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2567 0.22829933449009737 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2440 0.21700443169296366 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2363 0.21015634102068567 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2316 0.2059763376233212 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2259 0.2009069718009856 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2253 0.2003733543460029 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2179 0.1937920724012163 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2104 0.18712185421393257 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2088 0.18569887433397872 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2023 0.17991801857166614 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1967 0.17493758899182765 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1914 0.17022396813948049 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1818 0.16168608885975733 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1764 0.15688353176491304 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1744 0.15510480691497072 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1730 0.1538596995200111 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1730 0.1538596995200111 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1704 0.15154735721508608 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1688 0.15012437733513223 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 1642 0.14603331018026486 No Hit CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCC 1610 0.14318735042035713 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 1605 0.14274266920787157 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1572 0.13980777320546672 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1555 0.13829585708301576 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1514 0.13464947114063397 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1463 0.13011372277328107 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1440 0.1280681891958474 No Hit CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGG 1414 0.12575584689092237 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1409 0.12531116567843678 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1385 0.12317669585850599 No Hit GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATT 1365 0.12139797100856368 No Hit CTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAG 1357 0.12068648106858673 No Hit CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTC 1339 0.11908562870363865 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCC 1317 0.11712903136870209 No Hit CTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGT 1301 0.11570605148874824 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTAT 1240 0.11028094069642413 No Hit CTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAATA 1234 0.10974732324144144 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGG 1187 0.10556731984407697 No Hit GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTC 1164 0.10352178626664331 No Hit GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCT 1151 0.1023656151141808 No Hit AAATAGAACCGCGGTCCTATTCCATTATTCCTAGCTGC 1141 0.10147625268920964 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1138 0.10120944396171827 No Hit TCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAAC 1127 0.10023114529425001 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1126 0.10014220905175289 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.893624249711624E-5 2 0.0 0.0 0.0 0.0 8.893624249711624E-5 3 0.0 0.0 0.0 0.0 8.893624249711624E-5 4 0.0 0.0 0.0 0.0 8.893624249711624E-5 5 0.0 0.0 0.0 0.0 8.893624249711624E-5 6 0.0 0.0 0.0 0.0 8.893624249711624E-5 7 0.0 0.0 0.0 1.7787248499423247E-4 8.893624249711624E-5 8 0.0 0.0 0.0 1.7787248499423247E-4 8.893624249711624E-5 9 0.0 0.0 0.0 1.7787248499423247E-4 8.893624249711624E-5 10 0.0 0.0 0.0 1.7787248499423247E-4 8.893624249711624E-5 11 0.0 0.0 0.0 1.7787248499423247E-4 8.893624249711624E-5 12 0.0 0.0 0.0 1.7787248499423247E-4 8.893624249711624E-5 13 0.0 0.0 0.0 1.7787248499423247E-4 8.893624249711624E-5 14 0.0 0.0 0.0 3.5574496998846494E-4 8.893624249711624E-5 15 0.0 0.0 0.0 4.446812124855812E-4 8.893624249711624E-5 16 0.0 0.0 0.0 4.446812124855812E-4 8.893624249711624E-5 17 0.0 0.0 0.0 4.446812124855812E-4 8.893624249711624E-5 18 0.0 0.0 0.0 5.336174549826975E-4 8.893624249711624E-5 19 0.0 0.0 0.0 7.114899399769299E-4 8.893624249711624E-5 20 0.0 0.0 0.0 7.114899399769299E-4 1.7787248499423247E-4 21 0.0 0.0 0.0 8.004261824740462E-4 1.7787248499423247E-4 22 0.0 0.0 0.0 0.0014229798799538598 1.7787248499423247E-4 23 0.0 0.0 0.0 0.002579151032416371 1.7787248499423247E-4 24 0.0 0.0 0.0 0.0037353221848788823 1.7787248499423247E-4 25 0.0 0.0 0.0 0.004446812124855812 1.7787248499423247E-4 26 0.0 0.0 0.0 0.005247238307329858 2.6680872749134874E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 20 0.0037587471 31.990839 5 TAGGACG 100 1.4551915E-10 20.794044 4 CCTATAC 55 5.8420104E-5 20.35962 3 TACACCG 40 0.004490854 19.994274 5 GTATTAT 65 9.373651E-6 19.706827 1 TTAGGAC 125 1.4915713E-10 17.916464 3 GATATAC 135 2.3646862E-11 17.790884 1 TCTAGCG 500 0.0 16.639677 28 GGACTGT 135 4.4383341E-10 16.587843 6 CTAGCGG 495 0.0 16.484528 29 GTATTAC 100 1.304239E-6 16.011797 1 CACGCGG 60 0.0024421776 15.99969 25 ACGCGGC 60 0.0024421776 15.99969 26 ACCGAGT 60 0.002442903 15.998978 8 CTAGACA 70 3.7043737E-4 15.99542 4 AAGACGG 530 0.0 15.99542 5 TAGCGGC 515 0.0 15.845057 30 ATACCGT 480 0.0 15.662182 6 CAAGACG 535 0.0 15.54695 4 TCCTACA 135 7.887138E-9 15.410535 2 >>END_MODULE