##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062817_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1439477 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13938465150885 32.0 32.0 32.0 32.0 32.0 2 31.229988391617233 32.0 32.0 32.0 32.0 32.0 3 31.33180245325212 32.0 32.0 32.0 32.0 32.0 4 31.444358610801007 32.0 32.0 32.0 32.0 32.0 5 31.34237851664181 32.0 32.0 32.0 32.0 32.0 6 34.86144690050622 36.0 36.0 36.0 32.0 36.0 7 34.89777676197674 36.0 36.0 36.0 36.0 36.0 8 34.83170068017759 36.0 36.0 36.0 32.0 36.0 9 34.95325941296735 36.0 36.0 36.0 32.0 36.0 10 34.786365464679186 36.0 36.0 36.0 32.0 36.0 11 34.97386550809773 36.0 36.0 36.0 36.0 36.0 12 34.8559344817597 36.0 36.0 36.0 32.0 36.0 13 34.92429055830694 36.0 36.0 36.0 32.0 36.0 14 34.862241633593314 36.0 36.0 36.0 32.0 36.0 15 34.83081841529945 36.0 36.0 36.0 32.0 36.0 16 34.837454158697916 36.0 36.0 36.0 32.0 36.0 17 34.79734028400593 36.0 36.0 36.0 32.0 36.0 18 34.79995581728642 36.0 36.0 36.0 32.0 36.0 19 34.79464555529543 36.0 36.0 36.0 32.0 36.0 20 34.77399777835978 36.0 36.0 36.0 32.0 36.0 21 34.765336299225346 36.0 36.0 36.0 32.0 36.0 22 34.74258498051723 36.0 36.0 36.0 32.0 36.0 23 34.684979336245036 36.0 36.0 36.0 32.0 36.0 24 34.660468350657915 36.0 36.0 36.0 32.0 36.0 25 34.62449625801593 36.0 36.0 36.0 32.0 36.0 26 34.563708207911624 36.0 36.0 36.0 32.0 36.0 27 34.55002685002956 36.0 36.0 36.0 32.0 36.0 28 34.51074452735264 36.0 36.0 36.0 32.0 36.0 29 34.470759171560225 36.0 36.0 36.0 32.0 36.0 30 34.44414394950388 36.0 36.0 36.0 32.0 36.0 31 34.44168750178016 36.0 36.0 36.0 32.0 36.0 32 34.41341820675148 36.0 36.0 36.0 32.0 36.0 33 34.364082232644215 36.0 36.0 36.0 32.0 36.0 34 34.34740673175049 36.0 36.0 36.0 32.0 36.0 35 34.305652678021254 36.0 36.0 36.0 32.0 36.0 36 34.26348319563286 36.0 36.0 36.0 32.0 36.0 37 34.25325031243987 36.0 36.0 36.0 32.0 36.0 38 33.79576262767658 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 39.0 22 115.0 23 353.0 24 1024.0 25 2555.0 26 5356.0 27 10266.0 28 18140.0 29 28355.0 30 43395.0 31 61796.0 32 88809.0 33 142440.0 34 337620.0 35 699209.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.49554521757013 18.127810292409364 12.036805451341994 26.339839038678512 2 15.836179276347782 20.605831566486692 36.4215867440652 27.136402413100324 3 17.996953060034997 24.92502485277639 28.386768249857415 28.6912538373312 4 11.903400624257106 15.86034036114656 35.75806667866181 36.47819233593452 5 14.250453463306464 37.05915412333785 32.7263304658567 15.964061947498987 6 34.65771058633427 35.791461990497886 16.249047391781275 13.301780031386572 7 30.354067570656163 30.360667217331923 20.77124165752558 18.514023554486336 8 28.76142375306978 32.23174370499537 19.113818963690616 19.893013578244243 9 27.699687724697537 13.764219989092943 18.149343318732697 40.38674896747682 10 15.953101955381973 26.332667112666318 30.71881666982757 26.99541426212414 11 38.41625787393506 20.891051208106706 21.431831713330755 19.260859204627483 12 25.01688114286032 23.70577904737557 28.13086150793761 23.146478301826498 13 29.695965542993104 18.95760607165807 25.28720540474826 26.059222980600566 14 24.015475075652528 19.625266416390406 24.623543567242525 31.735714940714537 15 25.476266727429476 26.848223347785343 22.40063578646967 25.27487413831551 16 26.287116779219122 25.380676454017674 23.391064949283663 24.941141817479544 17 24.254850893762107 25.604716157326585 24.880286381790054 25.260146567121254 18 25.599297522641905 23.903820623740426 26.334564567547798 24.16231728606987 19 25.64160455498768 24.88278729010606 25.329338363864096 24.14626979104216 20 25.914411970458715 23.54792747643762 25.124680700004237 25.412979853099426 21 27.559650261137055 23.836276306484177 24.171329249434166 24.432744182944603 22 25.987841417403683 23.773356573255423 25.099949495545953 25.13885251379494 23 24.182705500269194 23.471821323746507 25.747581583563452 26.597891592420847 24 24.737595668426795 24.893277211098198 25.196303935387643 25.172823185087363 25 25.044964309904653 24.131923096962435 25.082269577450113 25.740843015682803 26 24.81034765428531 25.099133295727054 25.694349888431624 24.39616916155601 27 25.852792368339333 24.18593697572104 24.7905315611156 25.170739094824025 28 24.45110272689317 24.185103339615708 26.036261781188585 25.32753215230254 29 24.285000732905075 24.539746032760508 26.052795563944404 25.12245767039001 30 24.421717054180096 24.70411128486249 26.25634171299715 24.617829947960264 31 25.107660629520307 24.624637976153842 24.6315849436983 25.636116450627554 32 24.75975649489363 24.573647234377486 24.62901456570685 26.037581705022035 33 24.281666188483733 24.02150225394362 25.505582930467106 26.19124862710554 34 25.26285588446359 24.409420921626396 25.61291357902905 24.714809614880963 35 26.201321730045006 24.051582623411143 25.49933065967709 24.247764986866756 36 24.678129626246196 25.11300979452954 24.958578706016144 25.25028187320812 37 26.019259786199978 24.948383995287173 24.679397225101358 24.35295899341149 38 24.674395404994595 24.430904023408516 25.332482097652203 25.562218473944686 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 51.0 1 67.0 2 83.0 3 83.0 4 427.5 5 772.0 6 772.0 7 1071.0 8 1370.0 9 1524.0 10 1678.0 11 1678.0 12 2150.0 13 2622.0 14 3261.0 15 3900.0 16 3900.0 17 5881.0 18 7862.0 19 7862.0 20 9020.0 21 10178.0 22 10240.0 23 10302.0 24 10302.0 25 11573.0 26 12844.0 27 12844.0 28 16994.0 29 21144.0 30 25599.0 31 30054.0 32 30054.0 33 38958.0 34 47862.0 35 47862.0 36 52573.5 37 57285.0 38 66458.5 39 75632.0 40 75632.0 41 80336.0 42 85040.0 43 98098.5 44 111157.0 45 111157.0 46 116099.0 47 121041.0 48 121041.0 49 127594.5 50 134148.0 51 133591.0 52 133034.0 53 133034.0 54 126574.0 55 120114.0 56 120114.0 57 117388.0 58 114662.0 59 103231.0 60 91800.0 61 91800.0 62 88931.5 63 86063.0 64 71729.5 65 57396.0 66 57396.0 67 48678.5 68 39961.0 69 39961.0 70 32471.5 71 24982.0 72 19382.5 73 13783.0 74 13783.0 75 10383.0 76 6983.0 77 6983.0 78 6867.5 79 6752.0 80 5306.0 81 3860.0 82 3860.0 83 3567.0 84 3274.0 85 3274.0 86 2130.0 87 986.0 88 783.5 89 581.0 90 581.0 91 358.0 92 135.0 93 90.5 94 46.0 95 46.0 96 28.0 97 10.0 98 10.0 99 20.0 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008683709430577911 2 6.94696754446233E-5 3 0.0 4 4.1681805266773975E-4 5 0.0 6 5.557574035569864E-4 7 4.1681805266773975E-4 8 0.0029177263686741783 9 0.0029177263686741783 10 9.72575456224726E-4 11 0.00527969533379137 12 6.94696754446233E-5 13 1.389393508892466E-4 14 6.94696754446233E-5 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 2.0840902633386988E-4 22 0.0 23 1.389393508892466E-4 24 0.0 25 1.389393508892466E-4 26 6.94696754446233E-5 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 6.94696754446233E-5 38 6.94696754446233E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1439477.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.02825277603758 #Duplication Level Percentage of deduplicated Percentage of total 1 70.70764192317075 31.13133931790914 2 16.139433427619217 14.211821092264989 3 6.004203861982881 7.930638160627302 4 2.7558986710412925 4.853496132550084 5 1.424199744750815 3.135251318272854 6 0.7945377514962316 2.098926537778837 7 0.49937855495558764 1.5390735673961893 8 0.3018934343574601 1.0633472351453088 9 0.22266698605489976 0.8823274512213206 >10 0.9204521833073668 7.068891192715489 >50 0.09243925424879927 2.8905786032691196 >100 0.10901001248737592 10.662823861977841 >500 0.019199705268587365 5.844859505516318 >1k 0.008885814008602416 6.295608743884429 >5k 1.586752501536146E-4 0.39101727947091103 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5597 0.38882177346355656 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4092 0.28426991191939854 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2434 0.16908919003221307 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2423 0.16832502360232224 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2317 0.16096123800519216 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2277 0.15818245098740724 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2274 0.15797404196107337 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2226 0.15463949753973144 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2193 0.15234699825005887 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2135 0.14831775707427072 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2100 0.14588631843370892 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2087 0.1449832126529288 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2049 0.14234336498603312 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2002 0.13907829024013582 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1994 0.13852253283657884 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1954 0.13574374581879392 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1946 0.1351879884152369 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1777 0.1234476132650956 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1743 0.1210856442999784 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1709 0.1187236753348612 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1666 0.1157364792907424 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1655 0.11497231286085154 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 1575 0.10941473882528167 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1571 0.1091368601235032 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1543 0.10719170921105374 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1540 0.10698330018471987 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1519 0.10552443700038278 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1516 0.1053160279740489 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 1512 0.10503814927227043 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1493 0.10371822543882257 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1454 0.10100890809648226 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 6.94696754446233E-5 0.0 4 0.0 0.0 0.0 6.94696754446233E-5 0.0 5 0.0 0.0 0.0 1.389393508892466E-4 0.0 6 0.0 0.0 0.0 1.389393508892466E-4 0.0 7 0.0 0.0 0.0 1.389393508892466E-4 0.0 8 0.0 0.0 0.0 1.389393508892466E-4 0.0 9 0.0 0.0 0.0 1.389393508892466E-4 0.0 10 0.0 0.0 0.0 1.389393508892466E-4 0.0 11 0.0 0.0 0.0 2.0840902633386988E-4 0.0 12 0.0 0.0 0.0 2.0840902633386988E-4 0.0 13 0.0 0.0 0.0 2.0840902633386988E-4 0.0 14 0.0 0.0 0.0 2.778787017784932E-4 0.0 15 0.0 0.0 0.0 2.778787017784932E-4 0.0 16 0.0 0.0 0.0 2.778787017784932E-4 0.0 17 0.0 0.0 0.0 2.778787017784932E-4 0.0 18 0.0 0.0 0.0 3.4734837722311644E-4 0.0 19 0.0 0.0 0.0 4.1681805266773975E-4 0.0 20 0.0 0.0 0.0 4.86287728112363E-4 0.0 21 0.0 0.0 0.0 5.557574035569864E-4 0.0 22 0.0 0.0 0.0 8.336361053354795E-4 0.0 23 0.0 0.0 0.0 0.0018062115615602055 0.0 24 0.0 0.0 0.0 0.002570377991451062 0.0 25 0.0 0.0 0.0 0.003126135395008048 0.0 26 0.0 0.0 0.0 0.0035429534476757877 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGGGG 70 7.781946E-7 20.572859 3 CGTCGTA 395 0.0 19.038637 10 ACCGTCG 405 0.0 18.569836 8 TACCGTC 425 0.0 18.448982 7 CCGTCGT 415 0.0 18.12111 9 ATACCGT 410 0.0 17.95309 6 GTACCGT 100 6.809569E-8 17.601835 6 TTAATAC 100 6.812297E-8 17.601221 3 GTATTAC 105 1.18967364E-7 16.761906 1 CTAGCGG 515 0.0 16.15478 29 ATTACAC 160 1.8189894E-11 16.001112 3 GTCGTAG 480 0.0 16.000555 11 TCTAGCG 505 0.0 15.841034 28 CGCAAGA 495 0.0 15.839485 2 ACGAAAA 365 0.0 15.780274 23 TCAGATA 500 0.0 15.68109 2 AAGACGG 535 0.0 15.553023 5 CAAGACG 535 0.0 15.552482 4 TAGCGGC 535 0.0 15.550862 30 CGACCCG 365 0.0 15.344065 5 >>END_MODULE