##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062811_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1971041 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27791507127452 32.0 32.0 32.0 32.0 32.0 2 30.908663493047584 32.0 32.0 32.0 32.0 32.0 3 30.9588938028179 32.0 32.0 32.0 32.0 32.0 4 31.02088185887559 32.0 32.0 32.0 32.0 32.0 5 30.926968033643135 32.0 32.0 32.0 32.0 32.0 6 34.592846622672994 36.0 36.0 36.0 32.0 36.0 7 34.533365363784924 36.0 36.0 36.0 32.0 36.0 8 34.52036918562323 36.0 36.0 36.0 32.0 36.0 9 34.662775660171455 36.0 36.0 36.0 32.0 36.0 10 34.38515484964544 36.0 36.0 36.0 32.0 36.0 11 34.63550479163041 36.0 36.0 36.0 32.0 36.0 12 34.459307543577225 36.0 36.0 36.0 32.0 36.0 13 34.54727983842041 36.0 36.0 36.0 32.0 36.0 14 34.44191774803264 36.0 36.0 36.0 32.0 36.0 15 34.390771171173 36.0 36.0 36.0 32.0 36.0 16 34.40176942032154 36.0 36.0 36.0 32.0 36.0 17 34.323268262811375 36.0 36.0 36.0 32.0 36.0 18 34.35899202502637 36.0 36.0 36.0 32.0 36.0 19 34.34933875043695 36.0 36.0 36.0 32.0 36.0 20 34.33296618385919 36.0 36.0 36.0 32.0 36.0 21 34.32329565950175 36.0 36.0 36.0 32.0 36.0 22 34.29784565617864 36.0 36.0 36.0 32.0 36.0 23 34.240309054961315 36.0 36.0 36.0 32.0 36.0 24 34.21682603253814 36.0 36.0 36.0 32.0 36.0 25 34.19977717358492 36.0 36.0 36.0 32.0 36.0 26 34.14631151761937 36.0 36.0 36.0 32.0 36.0 27 34.15019170073073 36.0 36.0 36.0 32.0 36.0 28 34.132577150855816 36.0 36.0 36.0 32.0 36.0 29 34.10881153664485 36.0 36.0 36.0 32.0 36.0 30 34.07830735129305 36.0 36.0 36.0 32.0 36.0 31 34.09582246132881 36.0 36.0 36.0 32.0 36.0 32 34.05464219161347 36.0 36.0 36.0 32.0 36.0 33 34.02541195236426 36.0 36.0 36.0 32.0 36.0 34 34.02975432778923 36.0 36.0 36.0 32.0 36.0 35 33.98998752435895 36.0 36.0 36.0 32.0 36.0 36 33.95598112875379 36.0 36.0 36.0 32.0 36.0 37 33.95178689839531 36.0 36.0 36.0 32.0 36.0 38 33.357025551472546 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 2.0 8 2.0 9 4.0 10 15.0 11 27.0 12 9.0 13 7.0 14 154.0 15 395.0 16 544.0 17 682.0 18 843.0 19 1124.0 20 1566.0 21 2263.0 22 3592.0 23 5382.0 24 8115.0 25 12206.0 26 18053.0 27 25955.0 28 36786.0 29 49189.0 30 66316.0 31 90062.0 32 124365.0 33 187101.0 34 423431.0 35 912849.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.01766630094681 16.957413954244384 11.180665610142631 25.84425413466618 2 17.145717225566035 18.939853490377786 37.18771780120844 26.726711482847737 3 19.312416436854804 22.86658057707091 28.088278199628075 29.73272478644622 4 12.585876676500954 14.609270951981108 35.71292671975322 37.09192565176472 5 14.866902481740569 36.16833989840876 33.47325974766569 15.491497872184985 6 35.43450103017152 35.07408051928153 16.16407859642999 13.327339854116957 7 31.25087834385824 29.902046585582525 20.17489253129948 18.67218253925975 8 28.87009674100321 32.64252910652063 18.796764747067023 19.690609405409134 9 27.26559673917841 14.022161938106692 18.455970131458717 40.256271191256175 10 16.048741954092094 26.12660467886636 31.081214774181866 26.743438592859683 11 38.49166364790366 20.97593817573361 21.46203512318075 19.07036305318198 12 25.011111201308584 23.426674189135984 28.13168447841281 23.430530131142618 13 29.544270179236243 18.833581715802758 25.241189779936686 26.380958325024316 14 23.603619328182628 19.609074806315814 24.571012799976458 32.2162930655251 15 25.3222151064307 27.12204236523497 21.929657186876135 25.626085341458193 16 26.292438359695335 25.651895725098424 23.24691792134173 24.80874799386451 17 24.33298387023112 25.927540365018096 24.761169202726826 24.97830656202395 18 25.489094780807303 24.42021231525919 25.79732381095895 24.293369092974558 19 25.70071526461036 24.818215628661118 25.119603993953966 24.361465112774557 20 26.009246415136843 24.035453385870397 24.638012791956672 25.317287407036083 21 27.211980222384017 23.938272325290537 24.2085528802612 24.641194572064247 22 25.995393989455597 23.955669051191254 24.9642930169572 25.084643942395946 23 24.43392789550968 23.786089538486205 25.553336560347706 26.226646005656406 24 24.869200140656467 24.84885265017184 25.071203531228324 25.21074367794337 25 25.08197503250078 24.340114942645386 25.043055286336685 25.534854738517154 26 24.724536987702734 25.393391729360697 25.461134774661765 24.420936508274803 27 25.589978471512936 24.454900026739367 24.713414383546006 25.241707118201695 28 24.574476019611115 24.54504818300867 25.591207774225577 25.289268023154634 29 24.497875000507403 24.8640670095351 25.56012104581637 25.077936944141133 30 24.502645639552732 25.002803175477773 25.786677585098573 24.70787359987093 31 25.323299481259586 24.799941956276434 24.451425927278926 25.42533263518505 32 24.99984778651145 24.630527125458414 24.386681116800514 25.982943971229624 33 24.462079025813406 24.356237711676286 25.23219382254075 25.949489439969557 34 25.477573528665577 24.542012466028954 25.223919675095747 24.756494330209723 35 26.063934781428376 24.3641559688379 25.30725970669707 24.264649543036658 36 24.494075859444376 25.197006215907646 24.799137384244577 25.509780540403398 37 25.823362598187284 24.819430794108737 24.775185947593197 24.582020660110786 38 24.72673970520411 24.541750235803224 25.300278093055894 25.431231965936774 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 50.0 1 100.0 2 150.0 3 150.0 4 409.0 5 668.0 6 668.0 7 836.5 8 1005.0 9 1033.5 10 1062.0 11 1062.0 12 1475.0 13 1888.0 14 2683.0 15 3478.0 16 3478.0 17 5272.0 18 7066.0 19 7066.0 20 8892.5 21 10719.0 22 11818.5 23 12918.0 24 12918.0 25 15741.0 26 18564.0 27 18564.0 28 23638.5 29 28713.0 30 34805.5 31 40898.0 32 40898.0 33 52598.5 34 64299.0 35 64299.0 36 72967.5 37 81636.0 38 93962.5 39 106289.0 40 106289.0 41 112866.0 42 119443.0 43 135848.0 44 152253.0 45 152253.0 46 156400.5 47 160548.0 48 160548.0 49 171271.5 50 181995.0 51 186223.5 52 190452.0 53 190452.0 54 180708.5 55 170965.0 56 170965.0 57 165838.0 58 160711.0 59 144575.5 60 128440.0 61 128440.0 62 121795.5 63 115151.0 64 96232.5 65 77314.0 66 77314.0 67 64660.5 68 52007.0 69 52007.0 70 41677.0 71 31347.0 72 24626.0 73 17905.0 74 17905.0 75 13552.0 76 9199.0 77 9199.0 78 8932.0 79 8665.0 80 6814.5 81 4964.0 82 4964.0 83 4981.0 84 4998.0 85 4998.0 86 3388.5 87 1779.0 88 1493.0 89 1207.0 90 1207.0 91 876.0 92 545.0 93 471.5 94 398.0 95 398.0 96 355.5 97 313.0 98 313.0 99 676.0 100 1039.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1177550340150205 2 0.05418456541492541 3 0.01146602226945051 4 0.002333792143339484 5 2.536730590586396E-4 6 5.073461181172792E-4 7 1.0146922362345583E-4 8 2.536730590586396E-4 9 2.0293844724691165E-4 10 4.058768944938233E-4 11 0.0017757114134104772 12 0.002891872873268491 13 0.014713037425401096 14 0.009030760902487568 15 0.023490125268830025 16 0.010755737704086318 17 0.020243110112879437 18 0.005276399628419703 19 0.008219007113499922 20 0.0058344803583487105 21 0.0063925610882777165 22 0.007001376430018452 23 0.009081495514299296 24 0.01430716053090727 25 0.016184341167941204 26 0.018213725640410322 27 0.008320476337123378 28 0.005986684193783893 29 0.011009410763144958 30 0.003145545932327131 31 0.005733011134725255 32 0.00634182647646599 33 0.008421945560746835 34 0.012429979893873339 35 0.015930668108882565 36 0.014763772037212824 37 0.009639576244228305 38 0.005986684193783893 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1971041.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.95391551623207 #Duplication Level Percentage of deduplicated Percentage of total 1 78.79120483738231 40.93511599543497 2 12.83227981986394 13.333743632837217 3 3.7801660297034108 5.891832796336244 4 1.5411153796952735 3.2026791294981662 5 0.7912431901603327 2.055409092719194 6 0.45920459243002304 1.4314485959865122 7 0.32136154321461113 1.168719332643651 8 0.22644911285280453 0.9411934462304248 9 0.17044894517128517 0.7969941087533841 >10 0.9195582945412992 8.634462695474259 >50 0.07232514037534875 2.64847295698054 >100 0.07479199925858028 8.427463736623139 >500 0.01287374312352486 4.620162117908448 >1k 0.006977372227253932 5.9123023625739615 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4205 0.21333904266831585 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3407 0.17285282244255698 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3401 0.17254841477168664 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2692 0.13657757499717155 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2664 0.13515700586644316 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2643 0.13409157901839688 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2599 0.13185925609868085 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2581 0.13094603308606975 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2509 0.12729314103562533 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2494 0.12653212185844942 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2470 0.12531449117496796 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2271 0.11521830342443408 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 2143 0.10872427311253291 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2097 0.10639048096919344 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1989 0.10091114289352682 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1988 0.1008604082817151 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.073461181172791E-5 5.073461181172791E-5 2 0.0 0.0 0.0 5.073461181172791E-5 5.073461181172791E-5 3 0.0 0.0 0.0 5.073461181172791E-5 5.073461181172791E-5 4 0.0 0.0 0.0 5.073461181172791E-5 5.073461181172791E-5 5 0.0 0.0 0.0 5.073461181172791E-5 5.073461181172791E-5 6 0.0 0.0 0.0 5.073461181172791E-5 5.073461181172791E-5 7 0.0 0.0 0.0 1.0146922362345583E-4 5.073461181172791E-5 8 0.0 0.0 0.0 1.0146922362345583E-4 5.073461181172791E-5 9 0.0 0.0 0.0 1.0146922362345583E-4 5.073461181172791E-5 10 0.0 0.0 0.0 1.0146922362345583E-4 5.073461181172791E-5 11 0.0 0.0 0.0 1.0146922362345583E-4 5.073461181172791E-5 12 0.0 0.0 0.0 1.0146922362345583E-4 3.044076708703675E-4 13 0.0 0.0 0.0 1.5220383543518374E-4 3.044076708703675E-4 14 0.0 0.0 0.0 1.5220383543518374E-4 3.551422826820954E-4 15 0.0 0.0 0.0 1.5220383543518374E-4 4.058768944938233E-4 16 0.0 0.0 0.0 2.0293844724691165E-4 4.058768944938233E-4 17 0.0 0.0 0.0 2.536730590586396E-4 4.058768944938233E-4 18 0.0 5.073461181172791E-5 0.0 3.044076708703675E-4 4.058768944938233E-4 19 0.0 5.073461181172791E-5 0.0 3.551422826820954E-4 4.058768944938233E-4 20 0.0 5.073461181172791E-5 0.0 4.5661150630555125E-4 4.5661150630555125E-4 21 0.0 5.073461181172791E-5 0.0 6.08815341740735E-4 4.5661150630555125E-4 22 0.0 5.073461181172791E-5 0.0 8.117537889876466E-4 4.5661150630555125E-4 23 0.0 5.073461181172791E-5 0.0 0.00121763068348147 4.5661150630555125E-4 24 0.0 5.073461181172791E-5 0.0 0.001826446025222205 4.5661150630555125E-4 25 0.0 5.073461181172791E-5 0.0 0.002384526755151212 4.5661150630555125E-4 26 0.0 5.073461181172791E-5 0.0 0.002891872873268491 4.5661150630555125E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 585 0.0 20.785501 29 TAGCGGC 630 0.0 19.55478 30 AAGACGG 745 0.0 19.324661 5 CAAGACG 755 0.0 19.281069 4 TCTAGCG 640 0.0 18.9978 28 ACGGACC 800 0.0 18.9978 8 GACGGAC 790 0.0 18.225739 7 GCGCAAG 815 0.0 18.084953 1 CGCAAGA 800 0.0 17.80788 2 CGGACCA 810 0.0 17.777973 9 GTGTTAC 145 3.6379788E-12 17.678246 1 AGACGGA 860 0.0 17.67058 6 ACGATTA 65 2.1019997E-4 17.230087 32 AGAGCGA 865 0.0 16.648006 15 GAGCGAA 870 0.0 16.551489 16 AGCGGCG 755 0.0 16.529146 31 GCAAGAC 985 0.0 16.405024 3 AATAGCG 440 0.0 16.360083 5 CAGAGCG 910 0.0 16.352245 14 CATCGTT 540 0.0 16.294409 28 >>END_MODULE